RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 PPBPP02775 128 aa8.57□□□□□ -1.04
SEC61A1-206ENST00000491668 MT-ND6P03923 174 aa8.57□□□□□ -1.04
SEC61A1-206ENST00000491668 TMEM136Q6ZRR5 245 aa8.57□□□□□ -1.04
SEC61A1-206ENST00000491668 RPL39LQ96EH5 51 aaKnown RBP8.57□□□□□ -1.04
SEC61A1-206ENST00000491668 TIRAPP58753 221 aa8.56□□□□□ -1.04
SEC61A1-206ENST00000491668 UBE2D3P61077 147 aa8.56□□□□□ -1.04
SEC61A1-206ENST00000491668 UBE2D2P62837 147 aa8.56□□□□□ -1.04
SEC61A1-206ENST00000491668 DAZ4Q86SG3 579 aaKnown RBP8.56□□□□□ -1.04
SEC61A1-206ENST00000491668 ORMDL3Q8N138 153 aa8.56□□□□□ -1.04
SEC61A1-206ENST00000491668 GTSF1LQ9H1H1 148 aa8.56□□□□□ -1.04
SEC61A1-206ENST00000491668 ST20Q9HBF5 79 aa8.56□□□□□ -1.04
SEC61A1-206ENST00000491668 DAZ3Q9NR90 486 aaKnown RBP8.56□□□□□ -1.04
SEC61A1-206ENST00000491668 IGHV3-38A0A0C4DH36 116 aa8.55□□□□□ -1.04
SEC61A1-206ENST00000491668 SCO1O75880 301 aa8.55□□□□□ -1.04
SEC61A1-206ENST00000491668 FABP9Q0Z7S8 132 aa8.55□□□□□ -1.04
SEC61A1-206ENST00000491668 PRELID3AQ96N28 172 aa8.55□□□□□ -1.04
SEC61A1-206ENST00000491668 MRPL18Q9H0U6 180 aaKnown RBP8.55□□□□□ -1.04
SEC61A1-206ENST00000491668 TRAPPC1Q9Y5R8 145 aa8.55□□□□□ -1.04
SEC61A1-206ENST00000491668 SDHAF1A6NFY7 115 aa8.54□□□□□ -1.04
SEC61A1-206ENST00000491668 GAS8-AS1O95177 125 aa8.54□□□□□ -1.04
SEC61A1-206ENST00000491668 PMCHP20382 165 aa8.54□□□□□ -1.04
SEC61A1-206ENST00000491668 RPS10P46783 165 aaKnown RBP8.54□□□□□ -1.04
SEC61A1-206ENST00000491668 A0A087WTM6 91 aa8.53□□□□□ -1.04
SEC61A1-206ENST00000491668 TRAV8-6A0A0B4J262 113 aa8.53□□□□□ -1.04
SEC61A1-206ENST00000491668 TRBV6-5A0A0K0K1A5 114 aa8.53□□□□□ -1.04
SEC61A1-206ENST00000491668 TNFRSF6BO95407 300 aa8.53□□□□□ -1.04
SEC61A1-206ENST00000491668 LINC00694P0DN24 101 aa8.53□□□□□ -1.04
SEC61A1-206ENST00000491668 SUMO2P61956 95 aaKnown RBP8.53□□□□□ -1.04
SEC61A1-206ENST00000491668 COTL1Q14019 142 aa8.53□□□□□ -1.04
SEC61A1-206ENST00000491668 KIAA1644Q3SXP7 199 aa8.53□□□□□ -1.04
SEC61A1-206ENST00000491668 TMEM97Q5BJF2 176 aa8.53□□□□□ -1.04
SEC61A1-206ENST00000491668 YPEL4Q96NS1 127 aa8.53□□□□□ -1.04
SEC61A1-206ENST00000491668 TRAV9-2A0A087WT02 112 aa8.52□□□□□ -1.05
SEC61A1-206ENST00000491668 K7EP13 123 aa8.52□□□□□ -1.05
SEC61A1-206ENST00000491668 PHOX2AO14813 284 aa8.52□□□□□ -1.05
SEC61A1-206ENST00000491668 LELP1Q5T871 98 aa8.52□□□□□ -1.05
SEC61A1-206ENST00000491668 NFE4Q86UQ8 179 aa8.52□□□□□ -1.05
SEC61A1-206ENST00000491668 MAPKAPK5-AS1Q8N8E1 139 aa8.52□□□□□ -1.05
SEC61A1-206ENST00000491668 NRACQ8N912 160 aa8.52□□□□□ -1.05
SEC61A1-206ENST00000491668 DEFB104AQ8WTQ1 72 aa8.52□□□□□ -1.05
SEC61A1-206ENST00000491668 C20orf78Q9BR46 151 aa8.52□□□□□ -1.05
SEC61A1-206ENST00000491668 TMEM70Q9BUB7 260 aa8.52□□□□□ -1.05
SEC61A1-206ENST00000491668 LAMTOR2Q9Y2Q5 125 aa8.52□□□□□ -1.05
SEC61A1-206ENST00000491668 I3L3M4 83 aa8.51□□□□□ -1.05
SEC61A1-206ENST00000491668 VCYO14598 125 aa8.51□□□□□ -1.05
SEC61A1-206ENST00000491668 NPYP01303 97 aa8.51□□□□□ -1.05
SEC61A1-206ENST00000491668 FCER1GP30273 86 aa8.51□□□□□ -1.05
SEC61A1-206ENST00000491668 LINC01556Q5JQF7 62 aa8.51□□□□□ -1.05
SEC61A1-206ENST00000491668 Q8N3U1 123 aa8.51□□□□□ -1.05
SEC61A1-206ENST00000491668 KIR2DL4Q99706 377 aa8.51□□□□□ -1.05
SEC61A1-206ENST00000491668 MAP1LC3AQ9H492 121 aa8.51□□□□□ -1.05
SEC61A1-206ENST00000491668 FAT1Q14517 4588 aa8.51□□□□□ -1.05
SEC61A1-206ENST00000491668 TRBV25-1A0A075B6N4 114 aa8.5□□□□□ -1.05
SEC61A1-206ENST00000491668 TRBV6-8A0A0A6YYG3 113 aa8.5□□□□□ -1.05
SEC61A1-206ENST00000491668 IGHV1-24A0A0C4DH33 117 aa8.5□□□□□ -1.05
SEC61A1-206ENST00000491668 LOC389332A0A1B0GUA5 103 aa8.5□□□□□ -1.05
SEC61A1-206ENST00000491668 Q8N1X5 172 aa8.5□□□□□ -1.05
SEC61A1-206ENST00000491668 CHCHD5Q9BSY4 110 aa8.5□□□□□ -1.05
SEC61A1-206ENST00000491668 PGPEP1Q9NXJ5 209 aa8.5□□□□□ -1.05
SEC61A1-206ENST00000491668 LRCOL1A6NCL2 159 aa8.49□□□□□ -1.05
SEC61A1-206ENST00000491668 IBA57-AS1B1ANH7 110 aa8.49□□□□□ -1.05
SEC61A1-206ENST00000491668 RAB5AP20339 215 aa8.49□□□□□ -1.05
SEC61A1-206ENST00000491668 AMTP48728 403 aa8.49□□□□□ -1.05
SEC61A1-206ENST00000491668 KRTAP10-1P60331 282 aa8.49□□□□□ -1.05
SEC61A1-206ENST00000491668 SMIM2Q9BVW6 85 aa8.49□□□□□ -1.05
SEC61A1-206ENST00000491668 SRRM2Q9UQ35 2752 aaKnown RBP8.48□□□□□ -1.05
SEC61A1-206ENST00000491668 TRBV27A0A0K0K1C4 114 aa8.48□□□□□ -1.05
SEC61A1-206ENST00000491668 COLCA2A8K830 154 aa8.48□□□□□ -1.05
SEC61A1-206ENST00000491668 TMEM262E9PQX1 116 aa8.48□□□□□ -1.05
SEC61A1-206ENST00000491668 UBE2L6O14933 153 aa8.48□□□□□ -1.05
SEC61A1-206ENST00000491668 TCAPO15273 167 aa8.48□□□□□ -1.05
SEC61A1-206ENST00000491668 IGHV3-30P01768 117 aa8.48□□□□□ -1.05
SEC61A1-206ENST00000491668 IGHV3-33P01772 117 aa8.48□□□□□ -1.05
SEC61A1-206ENST00000491668 IGHV3-30-3P0DP02 117 aa8.48□□□□□ -1.05
SEC61A1-206ENST00000491668 IGHV3-30-5P0DP03 117 aa8.48□□□□□ -1.05
SEC61A1-206ENST00000491668 POLR2KP53803 58 aaKnown RBP8.48□□□□□ -1.05
SEC61A1-206ENST00000491668 C10orf126Q8N4M7 172 aa8.48□□□□□ -1.05
SEC61A1-206ENST00000491668 TMEM243Q9BU79 118 aa8.48□□□□□ -1.05
SEC61A1-206ENST00000491668 A0A087WX48 190 aa8.47□□□□□ -1.05
SEC61A1-206ENST00000491668 XGP55808 180 aa8.47□□□□□ -1.05
SEC61A1-206ENST00000491668 PKIAP61925 76 aa8.47□□□□□ -1.05
SEC61A1-206ENST00000491668 RPL32P62910 135 aaKnown RBP8.47□□□□□ -1.05
SEC61A1-206ENST00000491668 CDPF1Q6NVV7 123 aa8.47□□□□□ -1.05
SEC61A1-206ENST00000491668 NTM-AS1Q6ZSK4 140 aa8.47□□□□□ -1.05
SEC61A1-206ENST00000491668 PRSS3P2Q8NHM4 247 aa8.47□□□□□ -1.05
SEC61A1-206ENST00000491668 ALKBH7Q9BT30 221 aaPredicted RBP8.47□□□□□ -1.05
SEC61A1-206ENST00000491668 EREGO14944 169 aa8.46□□□□□ -1.06
SEC61A1-206ENST00000491668 TRGC2P03986 189 aa8.46□□□□□ -1.06
SEC61A1-206ENST00000491668 IQCJQ1A5X6 159 aa8.46□□□□□ -1.06
SEC61A1-206ENST00000491668 NXT2Q9NPJ8 142 aaKnown RBP8.46□□□□□ -1.06
SEC61A1-206ENST00000491668 TSHBP01222 138 aa8.45□□□□□ -1.06
SEC61A1-206ENST00000491668 GAGE6Q13070 117 aa8.45□□□□□ -1.06
SEC61A1-206ENST00000491668 Q9HAA7 133 aa8.45□□□□□ -1.06
SEC61A1-206ENST00000491668 AMMECR1LQ6DCA0 310 aa8.44□□□□□ -1.06
SEC61A1-206ENST00000491668 FA2HQ7L5A8 372 aa8.44□□□□□ -1.06
SEC61A1-206ENST00000491668 Q8N8P6 123 aa8.44□□□□□ -1.06
SEC61A1-206ENST00000491668 TMEM18Q96B42 140 aa8.44□□□□□ -1.06
SEC61A1-206ENST00000491668 VPS13BQ7Z7G8 4022 aa8.44□□□□□ -1.06
SEC61A1-206ENST00000491668 DNAH8Q96JB1 4490 aa8.43□□□□□ -1.06
SEC61A1-206ENST00000491668 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 1310.4 ms