RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 TRAV1-1A0A0B4J248 108 aa8.45□□□□□ -1.06
USF1-206ENST00000491629 ZNF727A8MUV8 499 aa8.45□□□□□ -1.06
USF1-206ENST00000491629 USP17L23D6RBM5 183 aa8.45□□□□□ -1.06
USF1-206ENST00000491629 ARL14EPLP0DKL9 152 aa8.45□□□□□ -1.06
USF1-206ENST00000491629 FGF8P55075 233 aaPredicted RBP8.45□□□□□ -1.06
USF1-206ENST00000491629 C9orf163Q8N9P6 203 aa8.45□□□□□ -1.06
USF1-206ENST00000491629 NDFIP1Q9BT67 221 aa8.45□□□□□ -1.06
USF1-206ENST00000491629 CHCHD7Q9BUK0 85 aa8.45□□□□□ -1.06
USF1-206ENST00000491629 XKRY2A2RUG3 117 aa8.44□□□□□ -1.06
USF1-206ENST00000491629 UBE2V1Q13404 147 aa8.44□□□□□ -1.06
USF1-206ENST00000491629 C14orf177Q52M58 125 aa8.44□□□□□ -1.06
USF1-206ENST00000491629 KRTAP26-1Q6PEX3 210 aa8.44□□□□□ -1.06
USF1-206ENST00000491629 TEX43Q6ZNM6 134 aa8.44□□□□□ -1.06
USF1-206ENST00000491629 SDIM1Q6ZPB5 146 aa8.44□□□□□ -1.06
USF1-206ENST00000491629 PRNTQ86SH4 94 aa8.44□□□□□ -1.06
USF1-206ENST00000491629 C5orf17Q8NAS9 161 aa8.44□□□□□ -1.06
USF1-206ENST00000491629 OR10G9Q8NGN4 311 aa8.44□□□□□ -1.06
USF1-206ENST00000491629 OR10G7Q8NGN6 311 aa8.44□□□□□ -1.06
USF1-206ENST00000491629 A0A087WX48 190 aa8.43□□□□□ -1.06
USF1-206ENST00000491629 SERTM2A0A1B0GWG4 89 aa8.43□□□□□ -1.06
USF1-206ENST00000491629 H3BVH4 76 aa8.43□□□□□ -1.06
USF1-206ENST00000491629 ASIPP42127 132 aa8.43□□□□□ -1.06
USF1-206ENST00000491629 UBE2G2P60604 165 aa8.43□□□□□ -1.06
USF1-206ENST00000491629 Q0VG73 95 aa8.43□□□□□ -1.06
USF1-206ENST00000491629 OR2G3Q8NGZ4 309 aa8.43□□□□□ -1.06
USF1-206ENST00000491629 C1orf43Q9BWL3 253 aa8.43□□□□□ -1.06
USF1-206ENST00000491629 IL36BQ9NZH7 164 aa8.43□□□□□ -1.06
USF1-206ENST00000491629 A0A087WWL8 130 aa8.42□□□□□ -1.06
USF1-206ENST00000491629 A0A1W2PPV4 95 aa8.42□□□□□ -1.06
USF1-206ENST00000491629 TMEM238C9JI98 176 aa8.42□□□□□ -1.06
USF1-206ENST00000491629 STAG3L2P0CL84 134 aa8.42□□□□□ -1.06
USF1-206ENST00000491629 STAG3L3P0CL85 134 aa8.42□□□□□ -1.06
USF1-206ENST00000491629 PTTG1IPP53801 180 aa8.42□□□□□ -1.06
USF1-206ENST00000491629 UBE2D3P61077 147 aa8.42□□□□□ -1.06
USF1-206ENST00000491629 UBE2D2P62837 147 aa8.42□□□□□ -1.06
USF1-206ENST00000491629 CIRBPQ14011 172 aaKnown RBP8.42□□□□□ -1.06
USF1-206ENST00000491629 MPV17L2Q567V2 206 aa8.42□□□□□ -1.06
USF1-206ENST00000491629 SCGB1C1Q8TD33 95 aa8.42□□□□□ -1.06
USF1-206ENST00000491629 EPDR1Q9UM22 224 aa8.42□□□□□ -1.06
USF1-206ENST00000491629 TRAV34A0A0B4J273 112 aa8.41□□□□□ -1.06
USF1-206ENST00000491629 S100A4P26447 101 aaKnown RBP8.41□□□□□ -1.06
USF1-206ENST00000491629 CRIP1P50238 77 aa8.41□□□□□ -1.06
USF1-206ENST00000491629 SUMO1P63165 101 aaKnown RBP8.41□□□□□ -1.06
USF1-206ENST00000491629 MAJINQ3KP22 176 aa8.41□□□□□ -1.06
USF1-206ENST00000491629 FAM74A4Q5TZK3 123 aa8.41□□□□□ -1.06
USF1-206ENST00000491629 DGAT2L7PQ6IED9 249 aa8.41□□□□□ -1.06
USF1-206ENST00000491629 SMIM12Q96EX1 92 aa8.41□□□□□ -1.06
USF1-206ENST00000491629 SFRP2Q96HF1 295 aa8.41□□□□□ -1.06
USF1-206ENST00000491629 ALKBH7Q9BT30 221 aaPredicted RBP8.41□□□□□ -1.06
USF1-206ENST00000491629 RHODO00212 210 aa8.4□□□□□ -1.06
USF1-206ENST00000491629 HLA-DQA1P01909 254 aa8.4□□□□□ -1.06
USF1-206ENST00000491629 ARMS2P0C7Q2 107 aa8.4□□□□□ -1.06
USF1-206ENST00000491629 ESDP10768 282 aa8.4□□□□□ -1.06
USF1-206ENST00000491629 GCHFRP30047 84 aa8.4□□□□□ -1.06
USF1-206ENST00000491629 FAM213BQ8TBF2 198 aa8.4□□□□□ -1.06
USF1-206ENST00000491629 ARL2-SNX15V9GYD0 113 aa8.4□□□□□ -1.06
USF1-206ENST00000491629 LPAP08519 4548 aa8.39□□□□□ -1.07
USF1-206ENST00000491629 TRBV6-8A0A0A6YYG3 113 aa8.39□□□□□ -1.07
USF1-206ENST00000491629 CCL25O15444 150 aa8.39□□□□□ -1.07
USF1-206ENST00000491629 SCGB1D1O95968 90 aa8.39□□□□□ -1.07
USF1-206ENST00000491629 CDC34P49427 236 aaPredicted RBP8.39□□□□□ -1.07
USF1-206ENST00000491629 PET117Q6UWS5 81 aa8.39□□□□□ -1.07
USF1-206ENST00000491629 TRBV7-3A0A075B6L6 115 aa8.38□□□□□ -1.07
USF1-206ENST00000491629 GRIFINA4D1Z8 144 aa8.38□□□□□ -1.07
USF1-206ENST00000491629 FABP5P3A8MUU1 101 aa8.38□□□□□ -1.07
USF1-206ENST00000491629 TMEM262E9PQX1 116 aa8.38□□□□□ -1.07
USF1-206ENST00000491629 K7EQM0 130 aa8.38□□□□□ -1.07
USF1-206ENST00000491629 CEBPGP53567 150 aa8.38□□□□□ -1.07
USF1-206ENST00000491629 OR10G8Q8NGN5 311 aa8.38□□□□□ -1.07
USF1-206ENST00000491629 ANAPC16Q96DE5 110 aa8.38□□□□□ -1.07
USF1-206ENST00000491629 TRBV10-1A0A0K0K1A3 114 aa8.37□□□□□ -1.07
USF1-206ENST00000491629 MAP1LC3B2A6NCE7 125 aa8.37□□□□□ -1.07
USF1-206ENST00000491629 ANGP03950 147 aaKnown RBP8.37□□□□□ -1.07
USF1-206ENST00000491629 SLPIP03973 132 aa8.37□□□□□ -1.07
USF1-206ENST00000491629 CHTF8P0CG12 524 aa8.37□□□□□ -1.07
USF1-206ENST00000491629 RPL19P84098 196 aaKnown RBP8.37□□□□□ -1.07
USF1-206ENST00000491629 NTM-AS1Q6ZSK4 140 aa8.37□□□□□ -1.07
USF1-206ENST00000491629 NEXN-AS1Q8NBZ9 246 aa8.37□□□□□ -1.07
USF1-206ENST00000491629 NUDT11Q96G61 164 aa8.37□□□□□ -1.07
USF1-206ENST00000491629 ZC2HC1AQ96GY0 325 aa8.37□□□□□ -1.07
USF1-206ENST00000491629 MAP1LC3BQ9GZQ8 125 aa8.37□□□□□ -1.07
USF1-206ENST00000491629 PRR34Q9NV39 138 aa8.37□□□□□ -1.07
USF1-206ENST00000491629 NAT8Q9UHE5 227 aa8.37□□□□□ -1.07
USF1-206ENST00000491629 CRPP02741 224 aa8.36□□□□□ -1.07
USF1-206ENST00000491629 RPL36AP83881 106 aaKnown RBP8.36□□□□□ -1.07
USF1-206ENST00000491629 MIAQ16674 131 aa8.36□□□□□ -1.07
USF1-206ENST00000491629 KCNIP4Q6PIL6 250 aa8.36□□□□□ -1.07
USF1-206ENST00000491629 CLPSL2Q6UWE3 100 aa8.36□□□□□ -1.07
USF1-206ENST00000491629 Q86TA4 180 aa8.36□□□□□ -1.07
USF1-206ENST00000491629 RPL36ALQ969Q0 106 aaKnown RBP8.36□□□□□ -1.07
USF1-206ENST00000491629 UQCR10Q9UDW1 63 aa8.36□□□□□ -1.07
USF1-206ENST00000491629 A0A087WYN8 130 aa8.35□□□□□ -1.07
USF1-206ENST00000491629 M0R381 172 aa8.35□□□□□ -1.07
USF1-206ENST00000491629 SH2D1AO60880 128 aa8.35□□□□□ -1.07
USF1-206ENST00000491629 IFNA1P01562 189 aa8.35□□□□□ -1.07
USF1-206ENST00000491629 CCL20P78556 96 aa8.35□□□□□ -1.07
USF1-206ENST00000491629 PRR27Q6MZM9 219 aa8.35□□□□□ -1.07
USF1-206ENST00000491629 MBD3L1Q8WWY6 194 aa8.35□□□□□ -1.07
USF1-206ENST00000491629 LINC01600Q96MT4 127 aa8.35□□□□□ -1.07
USF1-206ENST00000491629 VAMP8Q9BV40 100 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms