RNA–Protein interactions for RNA: ENST00000491539.5

NCK1-211, Transcript of NCK adaptor protein 1, humanhuman

TSL 4

Gene NCK1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-211ENST00000491539 GTSF1Q8WW33 167 aa9.07□□□□□ -0.96
NCK1-211ENST00000491539 NIT2Q9NQR4 276 aa9.07□□□□□ -0.96
NCK1-211ENST00000491539 TWIST1Q15672 202 aa9.06□□□□□ -0.96
NCK1-211ENST00000491539 KRTAP26-1Q6PEX3 210 aa9.06□□□□□ -0.96
NCK1-211ENST00000491539 FAM231DQ6ZW35 169 aa9.06□□□□□ -0.96
NCK1-211ENST00000491539 PGLYRP4Q96LB8 373 aa9.06□□□□□ -0.96
NCK1-211ENST00000491539 NDUFS6O75380 124 aaKnown RBP9.05□□□□□ -0.96
NCK1-211ENST00000491539 C14orf177Q52M58 125 aa9.05□□□□□ -0.96
NCK1-211ENST00000491539 LINC00269Q8N2A0 174 aa9.05□□□□□ -0.96
NCK1-211ENST00000491539 CLPSL2Q6UWE3 100 aa9.04□□□□□ -0.96
NCK1-211ENST00000491539 C20orf203Q8NBC4 194 aa9.04□□□□□ -0.96
NCK1-211ENST00000491539 TMEM243Q9BU79 118 aa9.04□□□□□ -0.96
NCK1-211ENST00000491539 A0A1B0GUV1 79 aa9.03□□□□□ -0.96
NCK1-211ENST00000491539 USP17L23D6RBM5 183 aa9.03□□□□□ -0.96
NCK1-211ENST00000491539 GATCO43716 136 aaKnown RBP9.03□□□□□ -0.96
NCK1-211ENST00000491539 OXTP01178 125 aa9.03□□□□□ -0.96
NCK1-211ENST00000491539 HLA-DQA1P01909 254 aa9.03□□□□□ -0.96
NCK1-211ENST00000491539 CT83Q5H943 113 aa9.03□□□□□ -0.96
NCK1-211ENST00000491539 GATD1Q8NB37 220 aa9.03□□□□□ -0.96
NCK1-211ENST00000491539 TRAV26-2A0A0B4J265 109 aa9.02□□□□□ -0.97
NCK1-211ENST00000491539 A0A1B0GVG6 124 aa9.02□□□□□ -0.97
NCK1-211ENST00000491539 A8MWL6 223 aa9.02□□□□□ -0.97
NCK1-211ENST00000491539 FOXA3P55318 350 aaPredicted RBP9.02□□□□□ -0.97
NCK1-211ENST00000491539 REG3AQ06141 175 aa9.02□□□□□ -0.97
NCK1-211ENST00000491539 CIRBP-AS1Q8TBR5 109 aa9.02□□□□□ -0.97
NCK1-211ENST00000491539 FAM210AQ96ND0 272 aa9.02□□□□□ -0.97
NCK1-211ENST00000491539 IGLV4-60A0A075B6I1 120 aa9.01□□□□□ -0.97
NCK1-211ENST00000491539 PRSS1P07477 247 aa9.01□□□□□ -0.97
NCK1-211ENST00000491539 MT1HL1P0DM35 61 aa9.01□□□□□ -0.97
NCK1-211ENST00000491539 CEBPGP53567 150 aa9.01□□□□□ -0.97
NCK1-211ENST00000491539 COTL1Q14019 142 aa9.01□□□□□ -0.97
NCK1-211ENST00000491539 LINC01551Q86U37 167 aa9.01□□□□□ -0.97
NCK1-211ENST00000491539 SMIM7Q9BQ49 75 aa9.01□□□□□ -0.97
NCK1-211ENST00000491539 GFRA4Q9GZZ7 299 aa9.01□□□□□ -0.97
NCK1-211ENST00000491539 SRP19P09132 144 aaKnown RBP9□□□□□ -0.97
NCK1-211ENST00000491539 RPL39LQ96EH5 51 aaKnown RBP9□□□□□ -0.97
NCK1-211ENST00000491539 CHAC1Q9BUX1 264 aa9□□□□□ -0.97
NCK1-211ENST00000491539 EIF5A2Q9GZV4 153 aaKnown RBP9□□□□□ -0.97
NCK1-211ENST00000491539 IGLV10-54A0A075B6I4 117 aa8.99□□□□□ -0.97
NCK1-211ENST00000491539 TRAV8-4A0A0B4J246 113 aa8.99□□□□□ -0.97
NCK1-211ENST00000491539 AMTP48728 403 aa8.99□□□□□ -0.97
NCK1-211ENST00000491539 SMIM15Q7Z3B0 74 aa8.99□□□□□ -0.97
NCK1-211ENST00000491539 ZNF727A8MUV8 499 aa8.98□□□□□ -0.97
NCK1-211ENST00000491539 DGAT2L7PQ6IED9 249 aa8.98□□□□□ -0.97
NCK1-211ENST00000491539 TEX261Q6UWH6 196 aa8.98□□□□□ -0.97
NCK1-211ENST00000491539 TSKUQ8WUA8 353 aa8.98□□□□□ -0.97
NCK1-211ENST00000491539 OSTCQ9NRP0 149 aa8.98□□□□□ -0.97
NCK1-211ENST00000491539 FAM231BA6NCW3 169 aa8.97□□□□□ -0.97
NCK1-211ENST00000491539 HIGD1CA8MV81 97 aa8.97□□□□□ -0.97
NCK1-211ENST00000491539 UBE2L6O14933 153 aa8.97□□□□□ -0.97
NCK1-211ENST00000491539 NCR2O95944 276 aa8.97□□□□□ -0.97
NCK1-211ENST00000491539 TRBV6-5A0A0K0K1A5 114 aa8.96□□□□□ -0.98
NCK1-211ENST00000491539 A0A1B0GUT8 65 aa8.96□□□□□ -0.98
NCK1-211ENST00000491539 SDHAF1A6NFY7 115 aa8.96□□□□□ -0.98
NCK1-211ENST00000491539 C9orf163Q8N9P6 203 aa8.96□□□□□ -0.98
NCK1-211ENST00000491539 CLRN3Q8NCR9 226 aa8.96□□□□□ -0.98
NCK1-211ENST00000491539 TMEM191AQ9H0A3 160 aa8.96□□□□□ -0.98
NCK1-211ENST00000491539 GAS8-AS1O95177 125 aa8.95□□□□□ -0.98
NCK1-211ENST00000491539 APCSP02743 223 aa8.95□□□□□ -0.98
NCK1-211ENST00000491539 BORCS7Q96B45 105 aa8.95□□□□□ -0.98
NCK1-211ENST00000491539 V9GYV3 84 aa8.95□□□□□ -0.98
NCK1-211ENST00000491539 H7C423 109 aa8.94□□□□□ -0.98
NCK1-211ENST00000491539 CNBPP62633 177 aaKnown RBP8.94□□□□□ -0.98
NCK1-211ENST00000491539 ISOC2Q96AB3 205 aa8.94□□□□□ -0.98
NCK1-211ENST00000491539 RNF185Q96GF1 192 aa8.94□□□□□ -0.98
NCK1-211ENST00000491539 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.93□□□□□ -0.98
NCK1-211ENST00000491539 IGKV2-29A2NJV5 120 aaPredicted RBP8.93□□□□□ -0.98
NCK1-211ENST00000491539 C9JQL5 133 aa8.93□□□□□ -0.98
NCK1-211ENST00000491539 I3L3M4 83 aa8.93□□□□□ -0.98
NCK1-211ENST00000491539 RPL37AP61513 92 aaKnown RBP8.93□□□□□ -0.98
NCK1-211ENST00000491539 FAM74A3Q4VXF1 159 aa8.93□□□□□ -0.98
NCK1-211ENST00000491539 FGF6P10767 208 aa8.92□□□□□ -0.98
NCK1-211ENST00000491539 RAB4AP20338 218 aa8.92□□□□□ -0.98
NCK1-211ENST00000491539 RPS10P46783 165 aaKnown RBP8.92□□□□□ -0.98
NCK1-211ENST00000491539 RPL23P62829 140 aaKnown RBP8.92□□□□□ -0.98
NCK1-211ENST00000491539 ODF1Q14990 250 aa8.92□□□□□ -0.98
NCK1-211ENST00000491539 TMEM241Q24JQ0 296 aa8.92□□□□□ -0.98
NCK1-211ENST00000491539 SDIM1Q6ZPB5 146 aa8.92□□□□□ -0.98
NCK1-211ENST00000491539 NUP35Q8NFH5 326 aa8.92□□□□□ -0.98
NCK1-211ENST00000491539 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.92□□□□□ -0.98
NCK1-211ENST00000491539 hDV102S1A0JD36 115 aa8.91□□□□□ -0.98
NCK1-211ENST00000491539 TSHBP01222 138 aa8.91□□□□□ -0.98
NCK1-211ENST00000491539 SLPIP03973 132 aa8.91□□□□□ -0.98
NCK1-211ENST00000491539 ESDP10768 282 aa8.91□□□□□ -0.98
NCK1-211ENST00000491539 POLR2KP53803 58 aaKnown RBP8.91□□□□□ -0.98
NCK1-211ENST00000491539 AMMECR1LQ6DCA0 310 aa8.91□□□□□ -0.98
NCK1-211ENST00000491539 AMN1Q8IY45 258 aa8.91□□□□□ -0.98
NCK1-211ENST00000491539 C15orf56Q8N910 161 aa8.91□□□□□ -0.98
NCK1-211ENST00000491539 MRAP2Q96G30 205 aa8.91□□□□□ -0.98
NCK1-211ENST00000491539 ST20Q9HBF5 79 aa8.91□□□□□ -0.98
NCK1-211ENST00000491539 TRBV27A0A0K0K1C4 114 aa8.9□□□□□ -0.98
NCK1-211ENST00000491539 GAGE12HA6NDE8 117 aa8.9□□□□□ -0.98
NCK1-211ENST00000491539 PANO1I0J062 215 aa8.9□□□□□ -0.98
NCK1-211ENST00000491539 ZNF25P17030 456 aaPredicted RBP8.9□□□□□ -0.98
NCK1-211ENST00000491539 PMCHP20382 165 aa8.9□□□□□ -0.98
NCK1-211ENST00000491539 SRSF3P84103 164 aaKnown RBP8.9□□□□□ -0.98
NCK1-211ENST00000491539 RIGQ13278 110 aa8.9□□□□□ -0.98
NCK1-211ENST00000491539 RNASEKQ6P5S7 137 aaKnown RBP8.9□□□□□ -0.98
NCK1-211ENST00000491539 TMEM242Q9NWH2 141 aa8.9□□□□□ -0.98
NCK1-211ENST00000491539 NAT8Q9UHE5 227 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms