RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 SDHAF1A6NFY7 115 aa9.41□□□□□ -0.9
CDK9-204ENST00000491521 VCYO14598 125 aa9.41□□□□□ -0.9
CDK9-204ENST00000491521 ATP6V0E2Q8NHE4 81 aa9.41□□□□□ -0.9
CDK9-204ENST00000491521 PRSS3P2Q8NHM4 247 aa9.41□□□□□ -0.9
CDK9-204ENST00000491521 UBE2D3P61077 147 aa9.4□□□□□ -0.9
CDK9-204ENST00000491521 UBE2D2P62837 147 aa9.4□□□□□ -0.9
CDK9-204ENST00000491521 IQCJQ1A5X6 159 aa9.4□□□□□ -0.9
CDK9-204ENST00000491521 NEGR1Q7Z3B1 354 aa9.4□□□□□ -0.9
CDK9-204ENST00000491521 SH2D6Q7Z4S9 175 aa9.4□□□□□ -0.9
CDK9-204ENST00000491521 DEFB104AQ8WTQ1 72 aa9.4□□□□□ -0.9
CDK9-204ENST00000491521 TMEM70Q9BUB7 260 aa9.4□□□□□ -0.9
CDK9-204ENST00000491521 RYR1P21817 5038 aa9.39□□□□□ -0.91
CDK9-204ENST00000491521 I3L3M4 83 aa9.39□□□□□ -0.91
CDK9-204ENST00000491521 POLR2KP53803 58 aaKnown RBP9.39□□□□□ -0.91
CDK9-204ENST00000491521 DAZ4Q86SG3 579 aaKnown RBP9.39□□□□□ -0.91
CDK9-204ENST00000491521 BAGE3Q86Y29 109 aa9.39□□□□□ -0.91
CDK9-204ENST00000491521 C18orf32Q8TCD1 76 aa9.39□□□□□ -0.91
CDK9-204ENST00000491521 DAZ3Q9NR90 486 aaKnown RBP9.39□□□□□ -0.91
CDK9-204ENST00000491521 FCER1GP30273 86 aa9.38□□□□□ -0.91
CDK9-204ENST00000491521 IFI27P40305 119 aaPredicted RBP9.38□□□□□ -0.91
CDK9-204ENST00000491521 RAB5BP61020 215 aa9.38□□□□□ -0.91
CDK9-204ENST00000491521 ESRGQ1W209 222 aa9.38□□□□□ -0.91
CDK9-204ENST00000491521 FA2HQ7L5A8 372 aa9.38□□□□□ -0.91
CDK9-204ENST00000491521 C6orf223Q8N319 242 aa9.38□□□□□ -0.91
CDK9-204ENST00000491521 KIR2DL4Q99706 377 aa9.38□□□□□ -0.91
CDK9-204ENST00000491521 SMIM2Q9BVW6 85 aa9.38□□□□□ -0.91
CDK9-204ENST00000491521 PRSS47A8MTI9 375 aa9.37□□□□□ -0.91
CDK9-204ENST00000491521 HIST1H2BKO60814 126 aa9.37□□□□□ -0.91
CDK9-204ENST00000491521 HIST1H2BJP06899 126 aa9.37□□□□□ -0.91
CDK9-204ENST00000491521 HIST1H2BOP23527 126 aa9.37□□□□□ -0.91
CDK9-204ENST00000491521 HIST1H2BBP33778 126 aa9.37□□□□□ -0.91
CDK9-204ENST00000491521 HIST1H2BDP58876 126 aa9.37□□□□□ -0.91
CDK9-204ENST00000491521 HIST1H2BCP62807 126 aa9.37□□□□□ -0.91
CDK9-204ENST00000491521 TNP2Q05952 138 aa9.37□□□□□ -0.91
CDK9-204ENST00000491521 COTL1Q14019 142 aa9.37□□□□□ -0.91
CDK9-204ENST00000491521 HIST2H2BEQ16778 126 aa9.37□□□□□ -0.91
CDK9-204ENST00000491521 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.37□□□□□ -0.91
CDK9-204ENST00000491521 NIT1Q86X76 327 aa9.37□□□□□ -0.91
CDK9-204ENST00000491521 Q8N8P6 123 aa9.37□□□□□ -0.91
CDK9-204ENST00000491521 HIST1H2BHQ93079 126 aa9.37□□□□□ -0.91
CDK9-204ENST00000491521 HIST1H2BNQ99877 126 aa9.37□□□□□ -0.91
CDK9-204ENST00000491521 HIST1H2BMQ99879 126 aa9.37□□□□□ -0.91
CDK9-204ENST00000491521 Q9H8V8 135 aa9.37□□□□□ -0.91
CDK9-204ENST00000491521 NXT2Q9NPJ8 142 aaKnown RBP9.37□□□□□ -0.91
CDK9-204ENST00000491521 TRBV27A0A0K0K1C4 114 aa9.36□□□□□ -0.91
CDK9-204ENST00000491521 TCAPO15273 167 aa9.36□□□□□ -0.91
CDK9-204ENST00000491521 LINC00694P0DN24 101 aa9.36□□□□□ -0.91
CDK9-204ENST00000491521 RPL32P62910 135 aaKnown RBP9.36□□□□□ -0.91
CDK9-204ENST00000491521 Q0VG73 95 aa9.36□□□□□ -0.91
CDK9-204ENST00000491521 GTSF1LQ9H1H1 148 aa9.36□□□□□ -0.91
CDK9-204ENST00000491521 LINC00614P0C842 121 aa9.35□□□□□ -0.91
CDK9-204ENST00000491521 NDUFA6P56556 154 aa9.35□□□□□ -0.91
CDK9-204ENST00000491521 TMEM97Q5BJF2 176 aa9.35□□□□□ -0.91
CDK9-204ENST00000491521 RNASEKQ6P5S7 137 aaKnown RBP9.35□□□□□ -0.91
CDK9-204ENST00000491521 LYPD5Q6UWN5 251 aa9.35□□□□□ -0.91
CDK9-204ENST00000491521 TSHBP01222 138 aa9.34□□□□□ -0.91
CDK9-204ENST00000491521 AMTP48728 403 aa9.34□□□□□ -0.91
CDK9-204ENST00000491521 KRTAP1-5Q9BYS1 174 aa9.34□□□□□ -0.91
CDK9-204ENST00000491521 MRPS16Q9Y3D3 137 aaKnown RBP9.34□□□□□ -0.91
CDK9-204ENST00000491521 IGHV1-24A0A0C4DH33 117 aa9.33□□□□□ -0.92
CDK9-204ENST00000491521 LAGE3Q14657 143 aa9.33□□□□□ -0.92
CDK9-204ENST00000491521 ABCA13Q86UQ4 5058 aa9.33□□□□□ -0.92
CDK9-204ENST00000491521 TRBV25-1A0A075B6N4 114 aa9.32□□□□□ -0.92
CDK9-204ENST00000491521 TRBV6-8A0A0A6YYG3 113 aa9.32□□□□□ -0.92
CDK9-204ENST00000491521 ORMDL2Q53FV1 153 aa9.32□□□□□ -0.92
CDK9-204ENST00000491521 TTC32Q5I0X7 151 aa9.32□□□□□ -0.92
CDK9-204ENST00000491521 NTM-AS1Q6ZSK4 140 aa9.32□□□□□ -0.92
CDK9-204ENST00000491521 AP5S1Q9NUS5 200 aa9.32□□□□□ -0.92
CDK9-204ENST00000491521 LRP1BQ9NZR2 4599 aa9.31□□□□□ -0.92
CDK9-204ENST00000491521 TRAV8-6A0A0B4J262 113 aa9.31□□□□□ -0.92
CDK9-204ENST00000491521 C16orf90A8MZG2 172 aa9.31□□□□□ -0.92
CDK9-204ENST00000491521 K7EMI3 77 aa9.31□□□□□ -0.92
CDK9-204ENST00000491521 SERF1AO75920 110 aa9.31□□□□□ -0.92
CDK9-204ENST00000491521 S100A6P06703 90 aa9.31□□□□□ -0.92
CDK9-204ENST00000491521 CHCHD1Q96BP2 118 aaKnown RBP9.31□□□□□ -0.92
CDK9-204ENST00000491521 URB1-AS1Q96HZ7 61 aa9.31□□□□□ -0.92
CDK9-204ENST00000491521 CHCHD5Q9BSY4 110 aa9.31□□□□□ -0.92
CDK9-204ENST00000491521 UPK3BQ9BT76 320 aa9.31□□□□□ -0.92
CDK9-204ENST00000491521 TMEM243Q9BU79 118 aa9.31□□□□□ -0.92
CDK9-204ENST00000491521 TMA7Q9Y2S6 64 aaKnown RBP9.31□□□□□ -0.92
CDK9-204ENST00000491521 TMEM262E9PQX1 116 aa9.3□□□□□ -0.92
CDK9-204ENST00000491521 UBE2L6O14933 153 aa9.3□□□□□ -0.92
CDK9-204ENST00000491521 HSBP1O75506 76 aa9.3□□□□□ -0.92
CDK9-204ENST00000491521 BTF3P20290 206 aaKnown RBP9.3□□□□□ -0.92
CDK9-204ENST00000491521 TIRAPP58753 221 aa9.3□□□□□ -0.92
CDK9-204ENST00000491521 LELP1Q5T871 98 aa9.3□□□□□ -0.92
CDK9-204ENST00000491521 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.29□□□□□ -0.92
CDK9-204ENST00000491521 IGKV2-29A2NJV5 120 aaPredicted RBP9.29□□□□□ -0.92
CDK9-204ENST00000491521 G0S2P27469 103 aa9.29□□□□□ -0.92
CDK9-204ENST00000491521 GAGE6Q13070 117 aa9.29□□□□□ -0.92
CDK9-204ENST00000491521 TMEM18Q96B42 140 aa9.29□□□□□ -0.92
CDK9-204ENST00000491521 LINC01546A6NGU7 62 aa9.28□□□□□ -0.92
CDK9-204ENST00000491521 SIVA1O15304 175 aa9.28□□□□□ -0.92
CDK9-204ENST00000491521 NUPR1O60356 82 aa9.28□□□□□ -0.92
CDK9-204ENST00000491521 ESDP10768 282 aa9.28□□□□□ -0.92
CDK9-204ENST00000491521 PMCHL1Q16048 86 aa9.28□□□□□ -0.92
CDK9-204ENST00000491521 CHCHD7Q9BUK0 85 aa9.28□□□□□ -0.92
CDK9-204ENST00000491521 HSPG2P98160 4391 aa9.28□□□□□ -0.92
CDK9-204ENST00000491521 DNAH5Q8TE73 4624 aa9.27□□□□□ -0.93
CDK9-204ENST00000491521 AMMECR1LQ6DCA0 310 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms