RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 DEFB121Q5J5C9 76 aa9.88□□□□□ -0.83
SMPD4-219ENST00000491128 C2orf66Q6UXQ4 117 aa9.88□□□□□ -0.83
SMPD4-219ENST00000491128 TRGV4A0A0C4DH28 118 aa9.87□□□□□ -0.83
SMPD4-219ENST00000491128 TRBV27A0A0K0K1C4 114 aa9.87□□□□□ -0.83
SMPD4-219ENST00000491128 RHODO00212 210 aa9.87□□□□□ -0.83
SMPD4-219ENST00000491128 PIK3CD-AS1Q5SR53 167 aa9.87□□□□□ -0.83
SMPD4-219ENST00000491128 Q8NAQ8 132 aa9.87□□□□□ -0.83
SMPD4-219ENST00000491128 RNF183Q96D59 192 aa9.87□□□□□ -0.83
SMPD4-219ENST00000491128 OPRPNQ99935 248 aaPredicted RBP9.87□□□□□ -0.83
SMPD4-219ENST00000491128 TRBV6-5A0A0K0K1A5 114 aa9.87□□□□□ -0.83
SMPD4-219ENST00000491128 H7C1H1 209 aa9.87□□□□□ -0.83
SMPD4-219ENST00000491128 TSHBP01222 138 aa9.87□□□□□ -0.83
SMPD4-219ENST00000491128 IGLC3P0DOY3 106 aa9.87□□□□□ -0.83
SMPD4-219ENST00000491128 TP53TG1Q9Y2A0 90 aa9.87□□□□□ -0.83
SMPD4-219ENST00000491128 C20orf202A1L168 122 aa9.86□□□□□ -0.83
SMPD4-219ENST00000491128 PRSS1P07477 247 aa9.86□□□□□ -0.83
SMPD4-219ENST00000491128 ORAOV1Q8WV07 137 aa9.86□□□□□ -0.83
SMPD4-219ENST00000491128 DKK2Q9UBU2 259 aa9.86□□□□□ -0.83
SMPD4-219ENST00000491128 UQCR10Q9UDW1 63 aa9.86□□□□□ -0.83
SMPD4-219ENST00000491128 ORMDL2Q53FV1 153 aa9.86□□□□□ -0.83
SMPD4-219ENST00000491128 CEMP1Q6PRD7 247 aaPredicted RBP9.86□□□□□ -0.83
SMPD4-219ENST00000491128 Q6ZVH6 145 aa9.86□□□□□ -0.83
SMPD4-219ENST00000491128 hDV102S1A0JD36 115 aa9.85□□□□□ -0.83
SMPD4-219ENST00000491128 I3L3M4 83 aa9.85□□□□□ -0.83
SMPD4-219ENST00000491128 FHL2Q14192 279 aa9.85□□□□□ -0.83
SMPD4-219ENST00000491128 SCGB3A1Q96QR1 104 aa9.85□□□□□ -0.83
SMPD4-219ENST00000491128 A0A096LPF7 62 aa9.85□□□□□ -0.83
SMPD4-219ENST00000491128 K7EQD1 137 aa9.85□□□□□ -0.83
SMPD4-219ENST00000491128 HTN3P15516 51 aa9.85□□□□□ -0.83
SMPD4-219ENST00000491128 PTTG1IPP53801 180 aa9.85□□□□□ -0.83
SMPD4-219ENST00000491128 Q6ZN92 141 aa9.85□□□□□ -0.83
SMPD4-219ENST00000491128 SBSPONQ8IVN8 264 aa9.85□□□□□ -0.83
SMPD4-219ENST00000491128 TP73-AS1Q9UF72 201 aa9.85□□□□□ -0.83
SMPD4-219ENST00000491128 SMIM9A6NGZ8 99 aa9.84□□□□□ -0.83
SMPD4-219ENST00000491128 HNRNPA3P51991 378 aaKnown RBP9.84□□□□□ -0.83
SMPD4-219ENST00000491128 TOMM6Q96B49 74 aa9.84□□□□□ -0.83
SMPD4-219ENST00000491128 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.83□□□□□ -0.84
SMPD4-219ENST00000491128 A0A0J9YY99 117 aa9.83□□□□□ -0.84
SMPD4-219ENST00000491128 IGKV2-29A2NJV5 120 aaPredicted RBP9.83□□□□□ -0.84
SMPD4-219ENST00000491128 K7EIL1 84 aa9.83□□□□□ -0.84
SMPD4-219ENST00000491128 RNASE13Q5GAN3 156 aaKnown RBP9.83□□□□□ -0.84
SMPD4-219ENST00000491128 TRBV7-3A0A075B6L6 115 aa9.82□□□□□ -0.84
SMPD4-219ENST00000491128 K7EP13 123 aa9.82□□□□□ -0.84
SMPD4-219ENST00000491128 UBE2V1Q13404 147 aa9.82□□□□□ -0.84
SMPD4-219ENST00000491128 HHLA3Q9XRX5 114 aa9.82□□□□□ -0.84
SMPD4-219ENST00000491128 CYSLTR1Q9Y271 337 aa9.82□□□□□ -0.84
SMPD4-219ENST00000491128 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.81□□□□□ -0.84
SMPD4-219ENST00000491128 MIFP14174 115 aa9.81□□□□□ -0.84
SMPD4-219ENST00000491128 HINT1P49773 126 aaPredicted RBP9.81□□□□□ -0.84
SMPD4-219ENST00000491128 DAD1P61803 113 aa9.81□□□□□ -0.84
SMPD4-219ENST00000491128 PET117Q6UWS5 81 aa9.81□□□□□ -0.84
SMPD4-219ENST00000491128 COX11Q9Y6N1 276 aa9.81□□□□□ -0.84
SMPD4-219ENST00000491128 RPL32P62910 135 aaKnown RBP9.81□□□□□ -0.84
SMPD4-219ENST00000491128 LINC01545Q5VT33 79 aa9.81□□□□□ -0.84
SMPD4-219ENST00000491128 RPL36AP83881 106 aaKnown RBP9.8□□□□□ -0.84
SMPD4-219ENST00000491128 RPL36ALQ969Q0 106 aaKnown RBP9.8□□□□□ -0.84
SMPD4-219ENST00000491128 EDA2RQ9HAV5 297 aa9.8□□□□□ -0.84
SMPD4-219ENST00000491128 ODF1Q14990 250 aa9.79□□□□□ -0.84
SMPD4-219ENST00000491128 NTM-AS1Q6ZSK4 140 aa9.79□□□□□ -0.84
SMPD4-219ENST00000491128 LINC00612Q8N6U2 182 aa9.79□□□□□ -0.84
SMPD4-219ENST00000491128 C20orf203Q8NBC4 194 aa9.79□□□□□ -0.84
SMPD4-219ENST00000491128 BAALCQ8WXS3 180 aa9.79□□□□□ -0.84
SMPD4-219ENST00000491128 MRPL35Q9NZE8 188 aaKnown RBP9.79□□□□□ -0.84
SMPD4-219ENST00000491128 CHCHD7Q9BUK0 85 aa9.79□□□□□ -0.84
SMPD4-219ENST00000491128 MRPS16Q9Y3D3 137 aaKnown RBP9.79□□□□□ -0.84
SMPD4-219ENST00000491128 HUWE1Q7Z6Z7 4374 aaKnown RBP9.78□□□□□ -0.84
SMPD4-219ENST00000491128 PRSS29PA6NIE9 313 aa9.78□□□□□ -0.84
SMPD4-219ENST00000491128 IGIPA6NJ69 53 aa9.78□□□□□ -0.84
SMPD4-219ENST00000491128 LYRM9A8MSI8 78 aa9.78□□□□□ -0.84
SMPD4-219ENST00000491128 A8MZ25 164 aa9.78□□□□□ -0.84
SMPD4-219ENST00000491128 F5H768 121 aa9.78□□□□□ -0.84
SMPD4-219ENST00000491128 ATP5LO75964 103 aa9.78□□□□□ -0.84
SMPD4-219ENST00000491128 GYPEP15421 78 aa9.78□□□□□ -0.84
SMPD4-219ENST00000491128 ERASQ7Z444 233 aa9.78□□□□□ -0.84
SMPD4-219ENST00000491128 COL7A1Q02388 2944 aa9.78□□□□□ -0.84
SMPD4-219ENST00000491128 A0A0J9YWU9 116 aa9.78□□□□□ -0.84
SMPD4-219ENST00000491128 SPART-AS1P0CW21 52 aa9.78□□□□□ -0.84
SMPD4-219ENST00000491128 LINC00694P0DN24 101 aa9.78□□□□□ -0.84
SMPD4-219ENST00000491128 UBE2D3P61077 147 aa9.78□□□□□ -0.84
SMPD4-219ENST00000491128 UBE2D2P62837 147 aa9.78□□□□□ -0.84
SMPD4-219ENST00000491128 TRBV6-4A0A1B0GX49 114 aa9.77□□□□□ -0.84
SMPD4-219ENST00000491128 DNAJC30Q96LL9 226 aa9.77□□□□□ -0.84
SMPD4-219ENST00000491128 K7EMI3 77 aa9.77□□□□□ -0.85
SMPD4-219ENST00000491128 TRAV9-2A0A087WT02 112 aa9.76□□□□□ -0.85
SMPD4-219ENST00000491128 TRAV26-1A0A087WT03 109 aa9.76□□□□□ -0.85
SMPD4-219ENST00000491128 CRYBA4P53673 196 aa9.76□□□□□ -0.85
SMPD4-219ENST00000491128 RHOHQ15669 191 aa9.76□□□□□ -0.85
SMPD4-219ENST00000491128 TRBV10-1A0A0K0K1A3 114 aa9.76□□□□□ -0.85
SMPD4-219ENST00000491128 LGALS9CQ6DKI2 356 aa9.76□□□□□ -0.85
SMPD4-219ENST00000491128 PRADC1Q9BSG0 188 aa9.76□□□□□ -0.85
SMPD4-219ENST00000491128 C12orf74Q32Q52 190 aa9.75□□□□□ -0.85
SMPD4-219ENST00000491128 VSIG2Q96IQ7 327 aa9.75□□□□□ -0.85
SMPD4-219ENST00000491128 PAX4O43316 350 aa9.75□□□□□ -0.85
SMPD4-219ENST00000491128 FAM104AQ969W3 186 aa9.75□□□□□ -0.85
SMPD4-219ENST00000491128 RNF151Q2KHN1 245 aa9.74□□□□□ -0.85
SMPD4-219ENST00000491128 Q6ZTC4 211 aa9.74□□□□□ -0.85
SMPD4-219ENST00000491128 ZMAT4Q9H898 229 aa9.74□□□□□ -0.85
SMPD4-219ENST00000491128 A0A087WX48 190 aa9.74□□□□□ -0.85
SMPD4-219ENST00000491128 NANOS2P60321 138 aaKnown RBP9.74□□□□□ -0.85
SMPD4-219ENST00000491128 TTTY13Q9BZ97 58 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 309.6 ms