RNA–Protein interactions for RNA: ENST00000490393.1

RIPPLY3-203, Transcript of ripply transcriptional repressor 3, humanhuman

TSL 1 (best)

Gene RIPPLY3, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-203ENST00000490393 TRRAPQ9Y4A5 3859 aa9.69□□□□□ -0.86
RIPPLY3-203ENST00000490393 TRBV6-4A0A1B0GX49 114 aa9.69□□□□□ -0.86
RIPPLY3-203ENST00000490393 GAGE12BA1L429 117 aa9.69□□□□□ -0.86
RIPPLY3-203ENST00000490393 CYSRT1A8MQ03 144 aa9.69□□□□□ -0.86
RIPPLY3-203ENST00000490393 GAGE7O76087 117 aa9.69□□□□□ -0.86
RIPPLY3-203ENST00000490393 GAGE12FP0CL80 117 aa9.69□□□□□ -0.86
RIPPLY3-203ENST00000490393 GAGE12GP0CL81 117 aa9.69□□□□□ -0.86
RIPPLY3-203ENST00000490393 GAGE12IP0CL82 117 aa9.69□□□□□ -0.86
RIPPLY3-203ENST00000490393 SHISA2Q6UWI4 295 aa9.69□□□□□ -0.86
RIPPLY3-203ENST00000490393 SLC25A29Q8N8R3 303 aa9.69□□□□□ -0.86
RIPPLY3-203ENST00000490393 TRGV2A0A075B6R0 118 aa9.68□□□□□ -0.86
RIPPLY3-203ENST00000490393 RPL36AP83881 106 aaKnown RBP9.68□□□□□ -0.86
RIPPLY3-203ENST00000490393 COTL1Q14019 142 aa9.68□□□□□ -0.86
RIPPLY3-203ENST00000490393 C2orf91Q6ZV80 131 aa9.68□□□□□ -0.86
RIPPLY3-203ENST00000490393 DAZ4Q86SG3 579 aaKnown RBP9.68□□□□□ -0.86
RIPPLY3-203ENST00000490393 ZNRF2Q8NHG8 242 aa9.68□□□□□ -0.86
RIPPLY3-203ENST00000490393 RPL36ALQ969Q0 106 aaKnown RBP9.68□□□□□ -0.86
RIPPLY3-203ENST00000490393 DAZ3Q9NR90 486 aaKnown RBP9.68□□□□□ -0.86
RIPPLY3-203ENST00000490393 IGKV2D-26A0A0A0MRZ7 120 aa9.68□□□□□ -0.86
RIPPLY3-203ENST00000490393 IGLV4-69A0A075B6H9 119 aa9.67□□□□□ -0.86
RIPPLY3-203ENST00000490393 NMUP48645 174 aa9.67□□□□□ -0.86
RIPPLY3-203ENST00000490393 UBE2D3P61077 147 aa9.67□□□□□ -0.86
RIPPLY3-203ENST00000490393 UBE2D2P62837 147 aa9.67□□□□□ -0.86
RIPPLY3-203ENST00000490393 PCP2Q8IVA1 136 aa9.67□□□□□ -0.86
RIPPLY3-203ENST00000490393 TP73-AS1Q9UF72 201 aa9.67□□□□□ -0.86
RIPPLY3-203ENST00000490393 IGLV4-3A0A075B6K6 122 aa9.66□□□□□ -0.86
RIPPLY3-203ENST00000490393 PRIMA1Q86XR5 153 aa9.66□□□□□ -0.86
RIPPLY3-203ENST00000490393 C3orf56Q8N813 242 aa9.66□□□□□ -0.86
RIPPLY3-203ENST00000490393 FAM104AQ969W3 186 aa9.66□□□□□ -0.86
RIPPLY3-203ENST00000490393 AMELXQ99217 191 aa9.66□□□□□ -0.86
RIPPLY3-203ENST00000490393 SPANXA1Q9NS26 97 aa9.66□□□□□ -0.86
RIPPLY3-203ENST00000490393 BAHCC1Q9P281 2608 aa9.66□□□□□ -0.86
RIPPLY3-203ENST00000490393 FHL2Q14192 279 aa9.66□□□□□ -0.86
RIPPLY3-203ENST00000490393 COL5A1-AS1Q5SY13 56 aa9.66□□□□□ -0.86
RIPPLY3-203ENST00000490393 C12orf54Q6X4T0 127 aa9.66□□□□□ -0.86
RIPPLY3-203ENST00000490393 NFE4Q86UQ8 179 aa9.66□□□□□ -0.86
RIPPLY3-203ENST00000490393 TIMM21Q9BVV7 248 aa9.66□□□□□ -0.86
RIPPLY3-203ENST00000490393 VCX2Q9H322 139 aa9.66□□□□□ -0.86
RIPPLY3-203ENST00000490393 PHLDA1Q8WV24 401 aaPredicted RBP9.65□□□□□ -0.86
RIPPLY3-203ENST00000490393 UBE2D4Q9Y2X8 147 aa9.65□□□□□ -0.86
RIPPLY3-203ENST00000490393 IGHV3-38A0A0C4DH36 116 aa9.64□□□□□ -0.87
RIPPLY3-203ENST00000490393 C11orf86A6NJI1 115 aa9.64□□□□□ -0.87
RIPPLY3-203ENST00000490393 LYRM9A8MSI8 78 aa9.64□□□□□ -0.87
RIPPLY3-203ENST00000490393 E9PLD3 99 aa9.64□□□□□ -0.87
RIPPLY3-203ENST00000490393 HINT1P49773 126 aaPredicted RBP9.64□□□□□ -0.87
RIPPLY3-203ENST00000490393 OPRPNQ99935 248 aaPredicted RBP9.64□□□□□ -0.87
RIPPLY3-203ENST00000490393 GTSF1LQ9H1H1 148 aa9.64□□□□□ -0.87
RIPPLY3-203ENST00000490393 HIGD1BQ9P298 99 aa9.64□□□□□ -0.87
RIPPLY3-203ENST00000490393 TRGV4A0A0C4DH28 118 aa9.64□□□□□ -0.87
RIPPLY3-203ENST00000490393 EGFEM1PQ0D2K5 195 aa9.64□□□□□ -0.87
RIPPLY3-203ENST00000490393 MPV17L2Q567V2 206 aa9.64□□□□□ -0.87
RIPPLY3-203ENST00000490393 CMYA5Q8N3K9 4069 aa9.63□□□□□ -0.87
RIPPLY3-203ENST00000490393 IGHV4-30-4P0DP06 118 aa9.63□□□□□ -0.87
RIPPLY3-203ENST00000490393 TCTAP57738 103 aa9.63□□□□□ -0.87
RIPPLY3-203ENST00000490393 MRPS36P82909 103 aaKnown RBP9.63□□□□□ -0.87
RIPPLY3-203ENST00000490393 BATFQ16520 125 aa9.63□□□□□ -0.87
RIPPLY3-203ENST00000490393 ZMAT5Q9UDW3 170 aaKnown RBP9.63□□□□□ -0.87
RIPPLY3-203ENST00000490393 A0A1B0GV90 55 aa9.62□□□□□ -0.87
RIPPLY3-203ENST00000490393 A8MZ25 164 aa9.62□□□□□ -0.87
RIPPLY3-203ENST00000490393 EMP1P54849 157 aa9.62□□□□□ -0.87
RIPPLY3-203ENST00000490393 TMEM97Q5BJF2 176 aa9.62□□□□□ -0.87
RIPPLY3-203ENST00000490393 BVES-AS1Q5T3Y7 98 aa9.62□□□□□ -0.87
RIPPLY3-203ENST00000490393 PRADC1Q9BSG0 188 aa9.62□□□□□ -0.87
RIPPLY3-203ENST00000490393 CSDC2Q9Y534 153 aaKnown RBP9.62□□□□□ -0.87
RIPPLY3-203ENST00000490393 GAGE12JA6NER3 117 aa9.62□□□□□ -0.87
RIPPLY3-203ENST00000490393 MIFP14174 115 aa9.62□□□□□ -0.87
RIPPLY3-203ENST00000490393 GAGE1Q13065 139 aa9.62□□□□□ -0.87
RIPPLY3-203ENST00000490393 GAGE4Q13068 117 aa9.62□□□□□ -0.87
RIPPLY3-203ENST00000490393 GAGE5Q13069 117 aa9.62□□□□□ -0.87
RIPPLY3-203ENST00000490393 DEFB135Q30KP9 77 aa9.62□□□□□ -0.87
RIPPLY3-203ENST00000490393 GAGE13Q4V321 117 aa9.62□□□□□ -0.87
RIPPLY3-203ENST00000490393 NTM-AS1Q6ZSK4 140 aa9.62□□□□□ -0.87
RIPPLY3-203ENST00000490393 OR11H2Q8NH07 326 aa9.62□□□□□ -0.87
RIPPLY3-203ENST00000490393 RNF183Q96D59 192 aa9.62□□□□□ -0.87
RIPPLY3-203ENST00000490393 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.61□□□□□ -0.87
RIPPLY3-203ENST00000490393 IGKV2-29A2NJV5 120 aaPredicted RBP9.61□□□□□ -0.87
RIPPLY3-203ENST00000490393 LINC00694P0DN24 101 aa9.61□□□□□ -0.87
RIPPLY3-203ENST00000490393 HERVK_113P61574 105 aa9.61□□□□□ -0.87
RIPPLY3-203ENST00000490393 OXLD1Q5BKU9 147 aa9.61□□□□□ -0.87
RIPPLY3-203ENST00000490393 LURAP1LQ8IV03 231 aa9.61□□□□□ -0.87
RIPPLY3-203ENST00000490393 SBSPONQ8IVN8 264 aa9.61□□□□□ -0.87
RIPPLY3-203ENST00000490393 MAPKAPK5-AS1Q8N8E1 139 aa9.61□□□□□ -0.87
RIPPLY3-203ENST00000490393 FBN1P35555 2871 aaKnown RBP9.61□□□□□ -0.87
RIPPLY3-203ENST00000490393 TRBV25-1A0A075B6N4 114 aa9.6□□□□□ -0.87
RIPPLY3-203ENST00000490393 DEFB130BP0DP73 79 aa9.6□□□□□ -0.87
RIPPLY3-203ENST00000490393 DEFB130AP0DP74 79 aa9.6□□□□□ -0.87
RIPPLY3-203ENST00000490393 TRAV8-6A0A0B4J262 113 aa9.59□□□□□ -0.87
RIPPLY3-203ENST00000490393 H7C423 109 aa9.59□□□□□ -0.87
RIPPLY3-203ENST00000490393 KRTAP10-11P60412 298 aa9.59□□□□□ -0.87
RIPPLY3-203ENST00000490393 HSD52Q0P140 79 aa9.59□□□□□ -0.87
RIPPLY3-203ENST00000490393 SMAGPQ0VAQ4 97 aa9.59□□□□□ -0.87
RIPPLY3-203ENST00000490393 TTTY13Q9BZ97 58 aa9.59□□□□□ -0.87
RIPPLY3-203ENST00000490393 MYMXA0A1B0GTQ4 84 aa9.59□□□□□ -0.87
RIPPLY3-203ENST00000490393 FAM222AQ5U5X8 452 aa9.59□□□□□ -0.87
RIPPLY3-203ENST00000490393 CEMP1Q6PRD7 247 aaPredicted RBP9.59□□□□□ -0.87
RIPPLY3-203ENST00000490393 Q8NAQ8 132 aa9.59□□□□□ -0.87
RIPPLY3-203ENST00000490393 IGHV4-28A0A0C4DH34 117 aa9.58□□□□□ -0.88
RIPPLY3-203ENST00000490393 CHAC1Q9BUX1 264 aa9.58□□□□□ -0.88
RIPPLY3-203ENST00000490393 A0A0J9YXV3 536 aa9.57□□□□□ -0.88
RIPPLY3-203ENST00000490393 LOC100131303A0A0U1RQF7 123 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms