RNA–Protein interactions for RNA: ENST00000489935.1

KCNC4-207, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 1,955 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-207ENST00000489935 UBE2V1Q13404 147 aa19.04■□□□□ 0.64
KCNC4-207ENST00000489935 C2CD3Q4AC94 2353 aa19.04■□□□□ 0.64
KCNC4-207ENST00000489935 PF4P02776 101 aa19.04■□□□□ 0.64
KCNC4-207ENST00000489935 FAM104AQ969W3 186 aa19.04■□□□□ 0.64
KCNC4-207ENST00000489935 FXYD2P54710 66 aa19.03■□□□□ 0.64
KCNC4-207ENST00000489935 VAMP3Q15836 100 aa19.03■□□□□ 0.64
KCNC4-207ENST00000489935 Q6ZTI0 123 aa19.03■□□□□ 0.64
KCNC4-207ENST00000489935 OR4C5Q8NGB2 326 aa19.03■□□□□ 0.64
KCNC4-207ENST00000489935 DNAJC30Q96LL9 226 aa19.03■□□□□ 0.64
KCNC4-207ENST00000489935 FN1P02751 2386 aaKnown RBP19.03■□□□□ 0.64
KCNC4-207ENST00000489935 H3BRM9 83 aa19.02■□□□□ 0.64
KCNC4-207ENST00000489935 ZNF479Q96JC4 524 aa19.02■□□□□ 0.64
KCNC4-207ENST00000489935 PTTG1IPP53801 180 aa19.02■□□□□ 0.64
KCNC4-207ENST00000489935 CSNK1G2-AS1Q8NCQ2 148 aa19.02■□□□□ 0.64
KCNC4-207ENST00000489935 CHCHD7Q9BUK0 85 aa19.02■□□□□ 0.64
KCNC4-207ENST00000489935 IGHV3-38A0A0C4DH36 116 aa19.01■□□□□ 0.63
KCNC4-207ENST00000489935 CEND1Q8N111 149 aa19.01■□□□□ 0.63
KCNC4-207ENST00000489935 PHLDA1Q8WV24 401 aaPredicted RBP19.01■□□□□ 0.63
KCNC4-207ENST00000489935 PYGO1Q9Y3Y4 419 aa19.01■□□□□ 0.63
KCNC4-207ENST00000489935 TMEM170BQ5T4T1 132 aa19■□□□□ 0.63
KCNC4-207ENST00000489935 CEMP1Q6PRD7 247 aaPredicted RBP19■□□□□ 0.63
KCNC4-207ENST00000489935 NFE4Q86UQ8 179 aa19■□□□□ 0.63
KCNC4-207ENST00000489935 TM2D2Q9BX73 214 aa19■□□□□ 0.63
KCNC4-207ENST00000489935 NOP10Q9NPE3 64 aaKnown RBP19■□□□□ 0.63
KCNC4-207ENST00000489935 PLAC8L1A1L4L8 177 aa18.99■□□□□ 0.63
KCNC4-207ENST00000489935 VCX2Q9H322 139 aa18.99■□□□□ 0.63
KCNC4-207ENST00000489935 HIVEP1P15822 2718 aa18.99■□□□□ 0.63
KCNC4-207ENST00000489935 AMMECR1LQ6DCA0 310 aa18.99■□□□□ 0.63
KCNC4-207ENST00000489935 HERVK_113P61574 105 aa18.97■□□□□ 0.63
KCNC4-207ENST00000489935 C9orf118A6NHY6 69 aa18.97■□□□□ 0.63
KCNC4-207ENST00000489935 ZNF815PA8K554 130 aa18.97■□□□□ 0.63
KCNC4-207ENST00000489935 DAZ2Q13117 558 aaKnown RBP18.97■□□□□ 0.63
KCNC4-207ENST00000489935 TAL2Q16559 108 aa18.97■□□□□ 0.63
KCNC4-207ENST00000489935 SPATA3Q8NHX4 192 aa18.97■□□□□ 0.63
KCNC4-207ENST00000489935 RAB37Q96AX2 223 aa18.97■□□□□ 0.63
KCNC4-207ENST00000489935 C1QTNF4Q9BXJ3 329 aa18.96■□□□□ 0.63
KCNC4-207ENST00000489935 AMELXQ99217 191 aa18.95■□□□□ 0.62
KCNC4-207ENST00000489935 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.95■□□□□ 0.62
KCNC4-207ENST00000489935 TRAV4A0A0B4J268 109 aa18.95■□□□□ 0.62
KCNC4-207ENST00000489935 A0A0J9YXV3 536 aa18.95■□□□□ 0.62
KCNC4-207ENST00000489935 IGKV2-29A2NJV5 120 aaPredicted RBP18.95■□□□□ 0.62
KCNC4-207ENST00000489935 PLEKHB2Q96CS7 222 aa18.95■□□□□ 0.62
KCNC4-207ENST00000489935 C16orf74Q96GX8 76 aa18.95■□□□□ 0.62
KCNC4-207ENST00000489935 HIST1H4GQ99525 98 aa18.95■□□□□ 0.62
KCNC4-207ENST00000489935 TRBV7-3A0A075B6L6 115 aa18.94■□□□□ 0.62
KCNC4-207ENST00000489935 TSPEAR-AS2P59090 65 aa18.94■□□□□ 0.62
KCNC4-207ENST00000489935 UBE2D4Q9Y2X8 147 aa18.94■□□□□ 0.62
KCNC4-207ENST00000489935 COTL1Q14019 142 aa18.93■□□□□ 0.62
KCNC4-207ENST00000489935 NAA38Q9BRA0 125 aaKnown RBP18.93■□□□□ 0.62
KCNC4-207ENST00000489935 SMIM13P0DJ93 91 aa18.93■□□□□ 0.62
KCNC4-207ENST00000489935 RNASE13Q5GAN3 156 aaKnown RBP18.92■□□□□ 0.62
KCNC4-207ENST00000489935 TMEM223A0PJW6 202 aa18.92■□□□□ 0.62
KCNC4-207ENST00000489935 H3BUT2 72 aa18.92■□□□□ 0.62
KCNC4-207ENST00000489935 ZNF22P17026 224 aaPredicted RBP18.92■□□□□ 0.62
KCNC4-207ENST00000489935 K7ERJ3 54 aa18.91■□□□□ 0.62
KCNC4-207ENST00000489935 VWFP04275 2813 aa18.91■□□□□ 0.62
KCNC4-207ENST00000489935 K7EQD1 137 aa18.9■□□□□ 0.62
KCNC4-207ENST00000489935 CRYBA4P53673 196 aa18.9■□□□□ 0.62
KCNC4-207ENST00000489935 RRN3P1Q2M238 152 aa18.9■□□□□ 0.62
KCNC4-207ENST00000489935 SPANXA1Q9NS26 97 aa18.9■□□□□ 0.62
KCNC4-207ENST00000489935 SLC25A29Q8N8R3 303 aa18.9■□□□□ 0.62
KCNC4-207ENST00000489935 NHP2Q9NX24 153 aaKnown RBP18.9■□□□□ 0.62
KCNC4-207ENST00000489935 GAGE12BA1L429 117 aa18.89■□□□□ 0.61
KCNC4-207ENST00000489935 CRLF1O75462 422 aa18.89■□□□□ 0.61
KCNC4-207ENST00000489935 GAGE7O76087 117 aa18.89■□□□□ 0.61
KCNC4-207ENST00000489935 GAGE12FP0CL80 117 aa18.89■□□□□ 0.61
KCNC4-207ENST00000489935 GAGE12GP0CL81 117 aa18.89■□□□□ 0.61
KCNC4-207ENST00000489935 GAGE12IP0CL82 117 aa18.89■□□□□ 0.61
KCNC4-207ENST00000489935 FOSL1P15407 271 aa18.89■□□□□ 0.61
KCNC4-207ENST00000489935 OVOL2Q9BRP0 275 aa18.89■□□□□ 0.61
KCNC4-207ENST00000489935 SCGB1D4Q6XE38 83 aa18.88■□□□□ 0.61
KCNC4-207ENST00000489935 TENM1Q9UKZ4 2725 aa18.88■□□□□ 0.61
KCNC4-207ENST00000489935 TRBV10-1A0A0K0K1A3 114 aa18.88■□□□□ 0.61
KCNC4-207ENST00000489935 J3QQQ9 107 aa18.86■□□□□ 0.61
KCNC4-207ENST00000489935 MRPS36P82909 103 aaKnown RBP18.86■□□□□ 0.61
KCNC4-207ENST00000489935 RPL36AP83881 106 aaKnown RBP18.86■□□□□ 0.61
KCNC4-207ENST00000489935 RPL36ALQ969Q0 106 aaKnown RBP18.86■□□□□ 0.61
KCNC4-207ENST00000489935 TRGV2A0A075B6R0 118 aa18.85■□□□□ 0.61
KCNC4-207ENST00000489935 Q6ZUT4 128 aa18.85■□□□□ 0.61
KCNC4-207ENST00000489935 LEPROTO15243 131 aa18.84■□□□□ 0.61
KCNC4-207ENST00000489935 IGHV3-64A0A075B6Q5 118 aa18.84■□□□□ 0.61
KCNC4-207ENST00000489935 A0A0J9YY99 117 aa18.84■□□□□ 0.61
KCNC4-207ENST00000489935 INSL3P51460 131 aa18.84■□□□□ 0.61
KCNC4-207ENST00000489935 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.84■□□□□ 0.61
KCNC4-207ENST00000489935 GAGE12JA6NER3 117 aa18.83■□□□□ 0.61
KCNC4-207ENST00000489935 UBE2D3P61077 147 aa18.83■□□□□ 0.61
KCNC4-207ENST00000489935 UBE2D2P62837 147 aa18.83■□□□□ 0.61
KCNC4-207ENST00000489935 GAGE4Q13068 117 aa18.83■□□□□ 0.61
KCNC4-207ENST00000489935 GAGE5Q13069 117 aa18.83■□□□□ 0.61
KCNC4-207ENST00000489935 C12orf74Q32Q52 190 aa18.83■□□□□ 0.61
KCNC4-207ENST00000489935 GAGE13Q4V321 117 aa18.83■□□□□ 0.61
KCNC4-207ENST00000489935 C9orf66Q5T8R8 295 aa18.83■□□□□ 0.61
KCNC4-207ENST00000489935 NTM-AS1Q6ZSK4 140 aa18.83■□□□□ 0.61
KCNC4-207ENST00000489935 LGALS3P17931 250 aaKnown RBP18.82■□□□□ 0.6
KCNC4-207ENST00000489935 A0A1W2PPM0 123 aa18.81■□□□□ 0.6
KCNC4-207ENST00000489935 DAZ4Q86SG3 579 aaKnown RBP18.81■□□□□ 0.6
KCNC4-207ENST00000489935 CITED1Q99966 193 aa18.81■□□□□ 0.6
KCNC4-207ENST00000489935 DAZ3Q9NR90 486 aaKnown RBP18.81■□□□□ 0.6
KCNC4-207ENST00000489935 GAGE10A6NGK3 116 aa18.81■□□□□ 0.6
KCNC4-207ENST00000489935 SAMD5Q5TGI4 173 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms