RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 GNG5P63218 68 aa5.57□□□□□ -1.52
SSBP1-212ENST00000489378 RPL36AP83881 106 aaKnown RBP5.57□□□□□ -1.52
SSBP1-212ENST00000489378 OR2D3Q8NGH3 330 aa5.57□□□□□ -1.52
SSBP1-212ENST00000489378 CMTM2Q8TAZ6 248 aa5.57□□□□□ -1.52
SSBP1-212ENST00000489378 RPL36ALQ969Q0 106 aaKnown RBP5.57□□□□□ -1.52
SSBP1-212ENST00000489378 IGKV3D-20A0A0C4DH25 116 aa5.56□□□□□ -1.52
SSBP1-212ENST00000489378 TRBV10-1A0A0K0K1A3 114 aa5.56□□□□□ -1.52
SSBP1-212ENST00000489378 PRYO14603 147 aa5.56□□□□□ -1.52
SSBP1-212ENST00000489378 EIF3GO75821 320 aaKnown RBP eCLIP5.56□□□□□ -1.527e-6■□□□□ 9.1
SSBP1-212ENST00000489378 S100A11P31949 105 aa5.56□□□□□ -1.52
SSBP1-212ENST00000489378 RPS10P46783 165 aaKnown RBP5.56□□□□□ -1.52
SSBP1-212ENST00000489378 SULT1A1P50225 295 aa5.56□□□□□ -1.52
SSBP1-212ENST00000489378 DEFA1P59665 94 aa5.56□□□□□ -1.52
SSBP1-212ENST00000489378 DEFA3P59666 94 aa5.56□□□□□ -1.52
SSBP1-212ENST00000489378 GAGE6Q13070 117 aa5.56□□□□□ -1.52
SSBP1-212ENST00000489378 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.56□□□□□ -1.52
SSBP1-212ENST00000489378 THAP6Q8TBB0 222 aa5.56□□□□□ -1.52
SSBP1-212ENST00000489378 GFRA4Q9GZZ7 299 aa5.56□□□□□ -1.52
SSBP1-212ENST00000489378 G3V3Q6 166 aa5.55□□□□□ -1.52
SSBP1-212ENST00000489378 S100A4P26447 101 aaKnown RBP5.55□□□□□ -1.52
SSBP1-212ENST00000489378 NKX2-5P52952 324 aaPredicted RBP5.55□□□□□ -1.52
SSBP1-212ENST00000489378 REG3AQ06141 175 aa5.55□□□□□ -1.52
SSBP1-212ENST00000489378 GAGE2BQ13066 116 aa5.55□□□□□ -1.52
SSBP1-212ENST00000489378 GAGE2EQ4V326 116 aa5.55□□□□□ -1.52
SSBP1-212ENST00000489378 GAGE2AQ6NT46 116 aa5.55□□□□□ -1.52
SSBP1-212ENST00000489378 NTM-AS1Q6ZSK4 140 aa5.55□□□□□ -1.52
SSBP1-212ENST00000489378 ZFP82Q8N141 532 aa5.55□□□□□ -1.52
SSBP1-212ENST00000489378 C15orf56Q8N910 161 aa5.55□□□□□ -1.52
SSBP1-212ENST00000489378 NDFIP1Q9BT67 221 aa5.55□□□□□ -1.52
SSBP1-212ENST00000489378 OR5AC2Q9NZP5 309 aa5.55□□□□□ -1.52
SSBP1-212ENST00000489378 GAGE2DQ9UEU5 116 aa5.55□□□□□ -1.52
SSBP1-212ENST00000489378 H3BVH4 76 aa5.54□□□□□ -1.52
SSBP1-212ENST00000489378 M0QXV9 152 aa5.54□□□□□ -1.52
SSBP1-212ENST00000489378 M0R036 132 aa5.54□□□□□ -1.52
SSBP1-212ENST00000489378 PKIAP61925 76 aa5.54□□□□□ -1.52
SSBP1-212ENST00000489378 TMEM252Q8N6L7 170 aa5.54□□□□□ -1.52
SSBP1-212ENST00000489378 OR10G8Q8NGN5 311 aa5.54□□□□□ -1.52
SSBP1-212ENST00000489378 LYRM2Q9NU23 88 aaPredicted RBP5.54□□□□□ -1.52
SSBP1-212ENST00000489378 SIX6O95475 246 aa5.53□□□□□ -1.52
SSBP1-212ENST00000489378 HBG1P69891 147 aa5.53□□□□□ -1.52
SSBP1-212ENST00000489378 HBG2P69892 147 aa5.53□□□□□ -1.52
SSBP1-212ENST00000489378 ATP6V1FQ16864 119 aa5.53□□□□□ -1.52
SSBP1-212ENST00000489378 HIGD2BQ4VC39 106 aa5.53□□□□□ -1.52
SSBP1-212ENST00000489378 NEXN-AS1Q8NBZ9 246 aa5.53□□□□□ -1.52
SSBP1-212ENST00000489378 SFRP2Q96HF1 295 aa5.53□□□□□ -1.52
SSBP1-212ENST00000489378 IL36BQ9NZH7 164 aa5.53□□□□□ -1.52
SSBP1-212ENST00000489378 H2BFSP57053 126 aa5.52□□□□□ -1.53
SSBP1-212ENST00000489378 IL15RAQ13261 267 aa5.52□□□□□ -1.53
SSBP1-212ENST00000489378 Q5BKY6 102 aa5.52□□□□□ -1.53
SSBP1-212ENST00000489378 FAM74A1Q5RGS3 127 aa5.52□□□□□ -1.53
SSBP1-212ENST00000489378 PSG8Q9UQ74 426 aa5.52□□□□□ -1.53
SSBP1-212ENST00000489378 TRAV8-4A0A0B4J246 113 aa5.51□□□□□ -1.53
SSBP1-212ENST00000489378 P01737 135 aa5.51□□□□□ -1.53
SSBP1-212ENST00000489378 ARMS2P0C7Q2 107 aa5.51□□□□□ -1.53
SSBP1-212ENST00000489378 RPL13AP40429 203 aaKnown RBP5.51□□□□□ -1.53
SSBP1-212ENST00000489378 KHDC3LQ587J8 217 aa5.51□□□□□ -1.53
SSBP1-212ENST00000489378 C20orf203Q8NBC4 194 aa5.51□□□□□ -1.53
SSBP1-212ENST00000489378 OR11H4Q8NGC9 324 aa5.51□□□□□ -1.53
SSBP1-212ENST00000489378 ISOC2Q96AB3 205 aa5.51□□□□□ -1.53
SSBP1-212ENST00000489378 V9GYY9 64 aa5.51□□□□□ -1.53
SSBP1-212ENST00000489378 M0R381 172 aa5.5□□□□□ -1.53
SSBP1-212ENST00000489378 GZMBP10144 247 aa5.5□□□□□ -1.53
SSBP1-212ENST00000489378 ZFP69Q49AA0 526 aa5.5□□□□□ -1.53
SSBP1-212ENST00000489378 PRNTQ86SH4 94 aa5.5□□□□□ -1.53
SSBP1-212ENST00000489378 LINC00474Q9P2X8 69 aa5.5□□□□□ -1.53
SSBP1-212ENST00000489378 IGLV4-60A0A075B6I1 120 aa5.49□□□□□ -1.53
SSBP1-212ENST00000489378 IGLV1-50A0A075B6I6 118 aa5.49□□□□□ -1.53
SSBP1-212ENST00000489378 GAGE12HA6NDE8 117 aa5.49□□□□□ -1.53
SSBP1-212ENST00000489378 H0YIZ8 118 aa5.49□□□□□ -1.53
SSBP1-212ENST00000489378 MT-ND6P03923 174 aa5.49□□□□□ -1.53
SSBP1-212ENST00000489378 TCRAP04437 139 aa5.49□□□□□ -1.53
SSBP1-212ENST00000489378 PVALBP20472 110 aaPredicted RBP5.49□□□□□ -1.53
SSBP1-212ENST00000489378 NHLH2Q02577 135 aa5.49□□□□□ -1.53
SSBP1-212ENST00000489378 DERL1Q9BUN8 251 aa5.49□□□□□ -1.53
SSBP1-212ENST00000489378 TRBV25-1A0A075B6N4 114 aa5.48□□□□□ -1.53
SSBP1-212ENST00000489378 TRBV6-1A0A0K0K1D8 114 aa5.48□□□□□ -1.53
SSBP1-212ENST00000489378 GRIFINA4D1Z8 144 aa5.48□□□□□ -1.53
SSBP1-212ENST00000489378 B4DEV8 164 aa5.48□□□□□ -1.53
SSBP1-212ENST00000489378 KRTAP1-4P0C5Y4 121 aa5.48□□□□□ -1.53
SSBP1-212ENST00000489378 TAS2R45P59539 299 aa5.48□□□□□ -1.53
SSBP1-212ENST00000489378 FLI1Q01543 452 aaPredicted RBP5.48□□□□□ -1.53
SSBP1-212ENST00000489378 C1orf137Q5JT78 98 aa5.48□□□□□ -1.53
SSBP1-212ENST00000489378 LINC00518Q8N0U6 118 aa5.48□□□□□ -1.53
SSBP1-212ENST00000489378 FER1L6-AS1Q8NA97 138 aa5.48□□□□□ -1.53
SSBP1-212ENST00000489378 OR5C1Q8NGR4 320 aa5.48□□□□□ -1.53
SSBP1-212ENST00000489378 DIRC1Q969H9 104 aa5.48□□□□□ -1.53
SSBP1-212ENST00000489378 WDR61Q9GZS3 305 aaKnown RBP5.48□□□□□ -1.53
SSBP1-212ENST00000489378 KCNIP2Q9NS61 270 aa5.48□□□□□ -1.53
SSBP1-212ENST00000489378 GVQW2A0A096LPI5 108 aaPredicted RBP5.48□□□□□ -1.53
SSBP1-212ENST00000489378 TSPAN13O95857 204 aa5.48□□□□□ -1.53
SSBP1-212ENST00000489378 RAB2AP61019 212 aa5.48□□□□□ -1.53
SSBP1-212ENST00000489378 PNRC1Q12796 327 aaPredicted RBP5.48□□□□□ -1.53
SSBP1-212ENST00000489378 DNLZQ5SXM8 178 aa5.48□□□□□ -1.53
SSBP1-212ENST00000489378 PHLDA3Q9Y5J5 127 aa5.48□□□□□ -1.53
SSBP1-212ENST00000489378 A0A1W2PNN7 141 aa5.47□□□□□ -1.53
SSBP1-212ENST00000489378 FABP5P3A8MUU1 101 aa5.47□□□□□ -1.53
SSBP1-212ENST00000489378 KRBOX1C9JBD0 128 aa5.47□□□□□ -1.53
SSBP1-212ENST00000489378 H0Y9J4 135 aa5.47□□□□□ -1.53
SSBP1-212ENST00000489378 ZNF56Q15929 161 aa5.47□□□□□ -1.53
SSBP1-212ENST00000489378 IQCJQ1A5X6 159 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms