RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 GTSF1Q8WW33 167 aa8.17□□□□□ -1.1
SRRM1-216ENST00000489130 TMEM243Q9BU79 118 aa8.17□□□□□ -1.1
SRRM1-216ENST00000489130 SRRM2Q9UQ35 2752 aaKnown RBP8.16□□□□□ -1.1
SRRM1-216ENST00000489130 REG3AQ06141 175 aa8.16□□□□□ -1.1
SRRM1-216ENST00000489130 FAM231DQ6ZW35 169 aa8.16□□□□□ -1.1
SRRM1-216ENST00000489130 CHAC1Q9BUX1 264 aa8.16□□□□□ -1.1
SRRM1-216ENST00000489130 NDUFS6O75380 124 aaKnown RBP8.15□□□□□ -1.1
SRRM1-216ENST00000489130 PLA2G1BP04054 148 aaKnown RBP8.15□□□□□ -1.1
SRRM1-216ENST00000489130 PRSS1P07477 247 aa8.15□□□□□ -1.1
SRRM1-216ENST00000489130 GATD1Q8NB37 220 aa8.15□□□□□ -1.1
SRRM1-216ENST00000489130 IGLV4-60A0A075B6I1 120 aa8.14□□□□□ -1.11
SRRM1-216ENST00000489130 TRAV8-4A0A0B4J246 113 aa8.14□□□□□ -1.11
SRRM1-216ENST00000489130 TRAV26-2A0A0B4J265 109 aa8.14□□□□□ -1.11
SRRM1-216ENST00000489130 GATCO43716 136 aaKnown RBP8.14□□□□□ -1.11
SRRM1-216ENST00000489130 COTL1Q14019 142 aa8.14□□□□□ -1.11
SRRM1-216ENST00000489130 CT83Q5H943 113 aa8.14□□□□□ -1.11
SRRM1-216ENST00000489130 DGAT2L7PQ6IED9 249 aa8.14□□□□□ -1.11
SRRM1-216ENST00000489130 IGLV10-54A0A075B6I4 117 aa8.13□□□□□ -1.11
SRRM1-216ENST00000489130 A8MWL6 223 aa8.13□□□□□ -1.11
SRRM1-216ENST00000489130 UBE2L6O14933 153 aa8.13□□□□□ -1.11
SRRM1-216ENST00000489130 AMTP48728 403 aa8.13□□□□□ -1.11
SRRM1-216ENST00000489130 FOXA3P55318 350 aaPredicted RBP8.13□□□□□ -1.11
SRRM1-216ENST00000489130 SMIM15Q7Z3B0 74 aa8.13□□□□□ -1.11
SRRM1-216ENST00000489130 CIRBP-AS1Q8TBR5 109 aa8.13□□□□□ -1.11
SRRM1-216ENST00000489130 DEFB104AQ8WTQ1 72 aa8.13□□□□□ -1.11
SRRM1-216ENST00000489130 GFRA4Q9GZZ7 299 aa8.13□□□□□ -1.11
SRRM1-216ENST00000489130 LORP23490 312 aaPredicted RBP8.12□□□□□ -1.11
SRRM1-216ENST00000489130 CEBPGP53567 150 aa8.12□□□□□ -1.11
SRRM1-216ENST00000489130 TEX261Q6UWH6 196 aa8.12□□□□□ -1.11
SRRM1-216ENST00000489130 LINC01551Q86U37 167 aa8.12□□□□□ -1.11
SRRM1-216ENST00000489130 CLRN3Q8NCR9 226 aa8.12□□□□□ -1.11
SRRM1-216ENST00000489130 RPL39LQ96EH5 51 aaKnown RBP8.12□□□□□ -1.11
SRRM1-216ENST00000489130 FAM210AQ96ND0 272 aa8.12□□□□□ -1.11
SRRM1-216ENST00000489130 EIF5A2Q9GZV4 153 aaKnown RBP8.12□□□□□ -1.11
SRRM1-216ENST00000489130 HERC1Q15751 4861 aa8.11□□□□□ -1.11
SRRM1-216ENST00000489130 DMBT1Q9UGM3 2413 aaPredicted RBP8.11□□□□□ -1.11
SRRM1-216ENST00000489130 FLG2Q5D862 2391 aaPredicted RBP8.11□□□□□ -1.11
SRRM1-216ENST00000489130 NCR2O95944 276 aa8.11□□□□□ -1.11
SRRM1-216ENST00000489130 C9orf163Q8N9P6 203 aa8.11□□□□□ -1.11
SRRM1-216ENST00000489130 SMIM7Q9BQ49 75 aa8.11□□□□□ -1.11
SRRM1-216ENST00000489130 KRTAP10-4P60372 401 aaPredicted RBP8.1□□□□□ -1.11
SRRM1-216ENST00000489130 CNBPP62633 177 aaKnown RBP8.1□□□□□ -1.11
SRRM1-216ENST00000489130 TSKUQ8WUA8 353 aa8.1□□□□□ -1.11
SRRM1-216ENST00000489130 TRBV6-5A0A0K0K1A5 114 aa8.09□□□□□ -1.11
SRRM1-216ENST00000489130 FAM231BA6NCW3 169 aa8.09□□□□□ -1.11
SRRM1-216ENST00000489130 SDHAF1A6NFY7 115 aa8.09□□□□□ -1.11
SRRM1-216ENST00000489130 ZNF727A8MUV8 499 aa8.09□□□□□ -1.11
SRRM1-216ENST00000489130 HIGD1CA8MV81 97 aa8.09□□□□□ -1.11
SRRM1-216ENST00000489130 H7C423 109 aa8.09□□□□□ -1.11
SRRM1-216ENST00000489130 SRP19P09132 144 aaKnown RBP8.09□□□□□ -1.11
SRRM1-216ENST00000489130 BORCS7Q96B45 105 aa8.09□□□□□ -1.11
SRRM1-216ENST00000489130 OSTCQ9NRP0 149 aa8.09□□□□□ -1.11
SRRM1-216ENST00000489130 A0A1B0GUT8 65 aa8.08□□□□□ -1.12
SRRM1-216ENST00000489130 A0A1B0GVG6 124 aa8.08□□□□□ -1.12
SRRM1-216ENST00000489130 APCSP02743 223 aa8.08□□□□□ -1.12
SRRM1-216ENST00000489130 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.07□□□□□ -1.12
SRRM1-216ENST00000489130 hDV102S1A0JD36 115 aa8.07□□□□□ -1.12
SRRM1-216ENST00000489130 IGKV2-29A2NJV5 120 aaPredicted RBP8.07□□□□□ -1.12
SRRM1-216ENST00000489130 I3L3M4 83 aa8.07□□□□□ -1.12
SRRM1-216ENST00000489130 AMMECR1LQ6DCA0 310 aa8.07□□□□□ -1.12
SRRM1-216ENST00000489130 SDIM1Q6ZPB5 146 aa8.07□□□□□ -1.12
SRRM1-216ENST00000489130 TMEM191AQ9H0A3 160 aa8.07□□□□□ -1.12
SRRM1-216ENST00000489130 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.07□□□□□ -1.12
SRRM1-216ENST00000489130 KRTAP29-1A8MX34 341 aaPredicted RBP8.06□□□□□ -1.12
SRRM1-216ENST00000489130 GAS8-AS1O95177 125 aa8.06□□□□□ -1.12
SRRM1-216ENST00000489130 FGF6P10767 208 aa8.06□□□□□ -1.12
SRRM1-216ENST00000489130 RNF185Q96GF1 192 aa8.06□□□□□ -1.12
SRRM1-216ENST00000489130 V9GYV3 84 aa8.06□□□□□ -1.12
SRRM1-216ENST00000489130 PANO1I0J062 215 aa8.05□□□□□ -1.12
SRRM1-216ENST00000489130 SLPIP03973 132 aa8.05□□□□□ -1.12
SRRM1-216ENST00000489130 ZNF25P17030 456 aaPredicted RBP8.05□□□□□ -1.12
SRRM1-216ENST00000489130 PMCHP20382 165 aa8.05□□□□□ -1.12
SRRM1-216ENST00000489130 CIRBPQ14011 172 aaKnown RBP8.05□□□□□ -1.12
SRRM1-216ENST00000489130 FAM74A3Q4VXF1 159 aa8.05□□□□□ -1.12
SRRM1-216ENST00000489130 C15orf56Q8N910 161 aa8.05□□□□□ -1.12
SRRM1-216ENST00000489130 ISOC2Q96AB3 205 aa8.05□□□□□ -1.12
SRRM1-216ENST00000489130 ST20Q9HBF5 79 aa8.05□□□□□ -1.12
SRRM1-216ENST00000489130 AP5S1Q9NUS5 200 aa8.05□□□□□ -1.12
SRRM1-216ENST00000489130 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.04□□□□□ -1.12
SRRM1-216ENST00000489130 IGKV3OR2-268A0A0C4DH90 116 aa8.04□□□□□ -1.12
SRRM1-216ENST00000489130 GAGE12HA6NDE8 117 aa8.04□□□□□ -1.12
SRRM1-216ENST00000489130 J3QL48 77 aa8.04□□□□□ -1.12
SRRM1-216ENST00000489130 TSHBP01222 138 aa8.04□□□□□ -1.12
SRRM1-216ENST00000489130 ESDP10768 282 aa8.04□□□□□ -1.12
SRRM1-216ENST00000489130 RAB4AP20338 218 aa8.04□□□□□ -1.12
SRRM1-216ENST00000489130 RPS10P46783 165 aaKnown RBP8.04□□□□□ -1.12
SRRM1-216ENST00000489130 POLR2KP53803 58 aaKnown RBP8.04□□□□□ -1.12
SRRM1-216ENST00000489130 RNASEKQ6P5S7 137 aaKnown RBP8.04□□□□□ -1.12
SRRM1-216ENST00000489130 AMN1Q8IY45 258 aa8.04□□□□□ -1.12
SRRM1-216ENST00000489130 NUP35Q8NFH5 326 aa8.04□□□□□ -1.12
SRRM1-216ENST00000489130 CHCHD10Q8WYQ3 142 aaPredicted RBP8.04□□□□□ -1.12
SRRM1-216ENST00000489130 MRAP2Q96G30 205 aa8.04□□□□□ -1.12
SRRM1-216ENST00000489130 TRBV27A0A0K0K1C4 114 aa8.03□□□□□ -1.12
SRRM1-216ENST00000489130 RPL23P62829 140 aaKnown RBP8.03□□□□□ -1.12
SRRM1-216ENST00000489130 TMEM241Q24JQ0 296 aa8.03□□□□□ -1.12
SRRM1-216ENST00000489130 CFAP161Q6P656 301 aa8.03□□□□□ -1.12
SRRM1-216ENST00000489130 OR5A1Q8NGJ0 315 aa8.03□□□□□ -1.12
SRRM1-216ENST00000489130 TMEM242Q9NWH2 141 aa8.03□□□□□ -1.12
SRRM1-216ENST00000489130 IGHV3-64A0A075B6Q5 118 aa8.02□□□□□ -1.13
SRRM1-216ENST00000489130 C9JQL5 133 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms