RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 NMBP08949 121 aa0.5□□□□□ -2.33
RFC4-213ENST00000489028 CCL18P55774 89 aa0.5□□□□□ -2.33
RFC4-213ENST00000489028 PPP3R1P63098 170 aa0.5□□□□□ -2.33
RFC4-213ENST00000489028 MYOZ3Q8TDC0 251 aa0.5□□□□□ -2.33
RFC4-213ENST00000489028 DOCK11Q5JSL3 2073 aa0.5□□□□□ -2.33
RFC4-213ENST00000489028 MYOM2P54296 1465 aa0.49□□□□□ -2.33
RFC4-213ENST00000489028 PIN1P1O15428 100 aa0.49□□□□□ -2.33
RFC4-213ENST00000489028 S100A1P23297 94 aa0.49□□□□□ -2.33
RFC4-213ENST00000489028 SPAG11BQ08648 103 aa0.49□□□□□ -2.33
RFC4-213ENST00000489028 SPAG11AQ6PDA7 123 aa0.49□□□□□ -2.33
RFC4-213ENST00000489028 UBE2DNLQ8IWF7 75 aa0.49□□□□□ -2.33
RFC4-213ENST00000489028 SVBPQ8N300 66 aa0.49□□□□□ -2.33
RFC4-213ENST00000489028 SMIM4Q8WVI0 70 aa0.49□□□□□ -2.33
RFC4-213ENST00000489028 MGST2Q99735 147 aa0.49□□□□□ -2.33
RFC4-213ENST00000489028 V9GYH0 126 aa0.49□□□□□ -2.33
RFC4-213ENST00000489028 SSC5DA1L4H1 1573 aa0.49□□□□□ -2.33
RFC4-213ENST00000489028 ZMYM4Q5VZL5 1548 aa0.48□□□□□ -2.33
RFC4-213ENST00000489028 UBE2L5PA0A1B0GUS4 154 aa0.48□□□□□ -2.33
RFC4-213ENST00000489028 M0R135 149 aa0.48□□□□□ -2.33
RFC4-213ENST00000489028 PRH1P02810 166 aa0.48□□□□□ -2.33
RFC4-213ENST00000489028 ATP5EP56381 51 aaPredicted RBP0.48□□□□□ -2.33
RFC4-213ENST00000489028 UBE2L3P68036 154 aaKnown RBP0.48□□□□□ -2.33
RFC4-213ENST00000489028 COX6A2Q02221 97 aa0.48□□□□□ -2.33
RFC4-213ENST00000489028 CFAP126Q5VTH2 177 aa0.48□□□□□ -2.33
RFC4-213ENST00000489028 SPINK6Q6UWN8 80 aa0.48□□□□□ -2.33
RFC4-213ENST00000489028 CACNA1EQ15878 2313 aa0.48□□□□□ -2.33
RFC4-213ENST00000489028 SIPA1L3O60292 1781 aaPredicted RBP0.47□□□□□ -2.33
RFC4-213ENST00000489028 ARAP2Q8WZ64 1704 aa0.47□□□□□ -2.33
RFC4-213ENST00000489028 TRBV7-3A0A075B6L6 115 aa0.47□□□□□ -2.33
RFC4-213ENST00000489028 CTXND1A0A1B0GTU2 59 aa0.47□□□□□ -2.33
RFC4-213ENST00000489028 SMR3AQ99954 134 aa0.47□□□□□ -2.33
RFC4-213ENST00000489028 NPVFQ9HCQ7 196 aa0.47□□□□□ -2.33
RFC4-213ENST00000489028 DYNLRB1Q9NP97 96 aa0.47□□□□□ -2.33
RFC4-213ENST00000489028 FAM135AQ9P2D6 1515 aa0.47□□□□□ -2.33
RFC4-213ENST00000489028 ARFGEF1Q9Y6D6 1849 aa0.47□□□□□ -2.33
RFC4-213ENST00000489028 MRC1P22897 1456 aa0.47□□□□□ -2.33
RFC4-213ENST00000489028 GOLGA3Q08378 1498 aa0.47□□□□□ -2.33
RFC4-213ENST00000489028 CACNA1HO95180 2353 aa0.46□□□□□ -2.34
RFC4-213ENST00000489028 UNC13BO14795 1591 aa0.46□□□□□ -2.34
RFC4-213ENST00000489028 LOC285095A0A1B0GVY8 99 aa0.46□□□□□ -2.34
RFC4-213ENST00000489028 G3V318 75 aa0.46□□□□□ -2.34
RFC4-213ENST00000489028 IFITM1P13164 125 aa0.46□□□□□ -2.34
RFC4-213ENST00000489028 DCDP81605 110 aaKnown RBP0.46□□□□□ -2.34
RFC4-213ENST00000489028 GTF2H5Q6ZYL4 71 aa0.46□□□□□ -2.34
RFC4-213ENST00000489028 DPH3P1Q9H4G8 78 aa0.46□□□□□ -2.34
RFC4-213ENST00000489028 NDUFA4L2Q9NRX3 87 aa0.46□□□□□ -2.34
RFC4-213ENST00000489028 QRICH2Q9H0J4 1663 aa0.46□□□□□ -2.34
RFC4-213ENST00000489028 PI4KAP42356 2102 aa0.46□□□□□ -2.34
RFC4-213ENST00000489028 FRAS1Q86XX4 4008 aa0.45□□□□□ -2.34
RFC4-213ENST00000489028 APCP25054 2843 aa0.45□□□□□ -2.34
RFC4-213ENST00000489028 C20orf202A1L168 122 aa0.45□□□□□ -2.34
RFC4-213ENST00000489028 S100PP25815 95 aa0.45□□□□□ -2.34
RFC4-213ENST00000489028 COX17Q14061 63 aa0.45□□□□□ -2.34
RFC4-213ENST00000489028 TSLPQ969D9 159 aa0.45□□□□□ -2.34
RFC4-213ENST00000489028 MUC5ACP98088 5654 aa0.45□□□□□ -2.34
RFC4-213ENST00000489028 ZNF609O15014 1411 aa0.45□□□□□ -2.34
RFC4-213ENST00000489028 BDP1A6H8Y1 2624 aa0.45□□□□□ -2.34
RFC4-213ENST00000489028 MAPKBP1O60336 1514 aa0.44□□□□□ -2.34
RFC4-213ENST00000489028 PATJQ8NI35 1801 aa0.44□□□□□ -2.34
RFC4-213ENST00000489028 F8VRH5 84 aa0.44□□□□□ -2.34
RFC4-213ENST00000489028 UQCR11O14957 56 aa0.44□□□□□ -2.34
RFC4-213ENST00000489028 APOC3P02656 99 aa0.44□□□□□ -2.34
RFC4-213ENST00000489028 SPINK8P0C7L1 97 aa0.44□□□□□ -2.34
RFC4-213ENST00000489028 BAGE2Q86Y30 109 aa0.44□□□□□ -2.34
RFC4-213ENST00000489028 AMELXQ99217 191 aa0.44□□□□□ -2.34
RFC4-213ENST00000489028 TTC28Q96AY4 2481 aa0.44□□□□□ -2.34
RFC4-213ENST00000489028 A0A0D9SFI3 127 aa0.43□□□□□ -2.34
RFC4-213ENST00000489028 ZNF815PA8K554 130 aa0.43□□□□□ -2.34
RFC4-213ENST00000489028 H3BQ15 152 aa0.43□□□□□ -2.34
RFC4-213ENST00000489028 HMGN4O00479 90 aa0.43□□□□□ -2.34
RFC4-213ENST00000489028 KRTAP2-3P0C7H8 128 aa0.43□□□□□ -2.34
RFC4-213ENST00000489028 S100A3P33764 101 aa0.43□□□□□ -2.34
RFC4-213ENST00000489028 GNG11P61952 73 aa0.43□□□□□ -2.34
RFC4-213ENST00000489028 TMEM170BQ5T4T1 132 aa0.43□□□□□ -2.34
RFC4-213ENST00000489028 SSBP3-AS1Q7Z2R9 100 aa0.43□□□□□ -2.34
RFC4-213ENST00000489028 TCEAL7Q9BRU2 100 aa0.43□□□□□ -2.34
RFC4-213ENST00000489028 KRTAP2-4Q9BYR9 128 aa0.43□□□□□ -2.34
RFC4-213ENST00000489028 KRTAP2-1Q9BYU5 128 aa0.43□□□□□ -2.34
RFC4-213ENST00000489028 LINC00474Q9P2X8 69 aa0.43□□□□□ -2.34
RFC4-213ENST00000489028 UQCR10Q9UDW1 63 aa0.43□□□□□ -2.34
RFC4-213ENST00000489028 C10orf71Q711Q0 1435 aa0.43□□□□□ -2.34
RFC4-213ENST00000489028 IFT172Q9UG01 1749 aa0.43□□□□□ -2.34
RFC4-213ENST00000489028 CUL7Q14999 1698 aa0.43□□□□□ -2.34
RFC4-213ENST00000489028 PZPP20742 1482 aa0.42□□□□□ -2.34
RFC4-213ENST00000489028 DOCK1Q14185 1865 aa0.42□□□□□ -2.34
RFC4-213ENST00000489028 PRDM2Q13029 1718 aa0.42□□□□□ -2.34
RFC4-213ENST00000489028 PEG3Q9GZU2 1588 aa0.42□□□□□ -2.34
RFC4-213ENST00000489028 IGLC7A0M8Q6 106 aa0.42□□□□□ -2.34
RFC4-213ENST00000489028 CGREF1Q99674 301 aa0.42□□□□□ -2.34
RFC4-213ENST00000489028 MYH8P13535 1937 aa0.42□□□□□ -2.34
RFC4-213ENST00000489028 MEGF8Q7Z7M0 2845 aa0.42□□□□□ -2.34
RFC4-213ENST00000489028 NRKQ7Z2Y5 1582 aa0.41□□□□□ -2.34
RFC4-213ENST00000489028 SCAPERQ9BY12 1400 aa0.41□□□□□ -2.34
RFC4-213ENST00000489028 RIMS1Q86UR5 1692 aaKnown RBP0.41□□□□□ -2.34
RFC4-213ENST00000489028 NAP1L6A6NFF2 107 aa0.41□□□□□ -2.34
RFC4-213ENST00000489028 CHKB-CPT1BH3BT56 60 aa0.41□□□□□ -2.34
RFC4-213ENST00000489028 CNFNQ9BYD5 112 aa0.41□□□□□ -2.34
RFC4-213ENST00000489028 LINC01558Q9Y6Z2 57 aa0.41□□□□□ -2.34
RFC4-213ENST00000489028 TPRP12270 2363 aaKnown RBP0.41□□□□□ -2.34
RFC4-213ENST00000489028 ABCA12Q86UK0 2595 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms