RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 PLEKHB2Q96CS7 222 aa13.47□□□□□ -0.25
COL16A1-215ENST00000488897 IGHV3-16A0A0C4DH30 117 aa13.46□□□□□ -0.25
COL16A1-215ENST00000488897 SNRPD3P62318 126 aaKnown RBP13.46□□□□□ -0.25
COL16A1-215ENST00000488897 SHISA2Q6UWI4 295 aa13.46□□□□□ -0.25
COL16A1-215ENST00000488897 AMTNQ6UX39 209 aa13.46□□□□□ -0.25
COL16A1-215ENST00000488897 PGPEP1Q9NXJ5 209 aa13.45□□□□□ -0.26
COL16A1-215ENST00000488897 A0A0J9YX75 114 aa13.45□□□□□ -0.26
COL16A1-215ENST00000488897 ZNF688P0C7X2 276 aa13.45□□□□□ -0.26
COL16A1-215ENST00000488897 RPL39P62891 51 aaKnown RBP13.45□□□□□ -0.26
COL16A1-215ENST00000488897 MRPL16Q9NX20 251 aaKnown RBP13.45□□□□□ -0.26
COL16A1-215ENST00000488897 UBE2D1P51668 147 aa13.44□□□□□ -0.26
COL16A1-215ENST00000488897 PRO0461Q9UI25 63 aa13.44□□□□□ -0.26
COL16A1-215ENST00000488897 ZNF876PQ49A33 203 aa13.43□□□□□ -0.26
COL16A1-215ENST00000488897 FAM74A4Q5TZK3 123 aa13.43□□□□□ -0.26
COL16A1-215ENST00000488897 EMP1P54849 157 aa13.43□□□□□ -0.26
COL16A1-215ENST00000488897 FHL3Q13643 280 aa13.43□□□□□ -0.26
COL16A1-215ENST00000488897 A0A0J9YY99 117 aa13.42□□□□□ -0.26
COL16A1-215ENST00000488897 K7EQG2 157 aa13.42□□□□□ -0.26
COL16A1-215ENST00000488897 RHOHQ15669 191 aa13.42□□□□□ -0.26
COL16A1-215ENST00000488897 ETDBQ3ZM63 59 aa13.42□□□□□ -0.26
COL16A1-215ENST00000488897 MDFICQ9P1T7 246 aa13.42□□□□□ -0.26
COL16A1-215ENST00000488897 IGHV1OR15-1A0A075B7D0 117 aa13.42□□□□□ -0.26
COL16A1-215ENST00000488897 M0QY20 66 aa13.42□□□□□ -0.26
COL16A1-215ENST00000488897 ZNF56Q15929 161 aa13.42□□□□□ -0.26
COL16A1-215ENST00000488897 TMEM170BQ5T4T1 132 aa13.42□□□□□ -0.26
COL16A1-215ENST00000488897 OXLD1Q5BKU9 147 aa13.41□□□□□ -0.26
COL16A1-215ENST00000488897 TRPT1Q86TN4 253 aaKnown RBP13.41□□□□□ -0.26
COL16A1-215ENST00000488897 Q8N1Y9 231 aa13.41□□□□□ -0.26
COL16A1-215ENST00000488897 LINC00482Q8N8I6 264 aa13.41□□□□□ -0.26
COL16A1-215ENST00000488897 DEFB104AQ8WTQ1 72 aa13.41□□□□□ -0.26
COL16A1-215ENST00000488897 ZNF256Q9Y2P7 627 aaPredicted RBP13.41□□□□□ -0.26
COL16A1-215ENST00000488897 TRAV12-2A0A075B6T6 113 aa13.41□□□□□ -0.26
COL16A1-215ENST00000488897 TMEM238C9JI98 176 aa13.41□□□□□ -0.26
COL16A1-215ENST00000488897 SH2D6Q7Z4S9 175 aa13.41□□□□□ -0.26
COL16A1-215ENST00000488897 IGKV3-20P01619 116 aa13.4□□□□□ -0.26
COL16A1-215ENST00000488897 ZNRF2Q8NHG8 242 aa13.4□□□□□ -0.26
COL16A1-215ENST00000488897 LYRM7Q5U5X0 104 aa13.39□□□□□ -0.27
COL16A1-215ENST00000488897 NFE4Q86UQ8 179 aa13.39□□□□□ -0.27
COL16A1-215ENST00000488897 SIGMAR1Q99720 223 aa13.39□□□□□ -0.27
COL16A1-215ENST00000488897 SLC25A29Q8N8R3 303 aa13.39□□□□□ -0.27
COL16A1-215ENST00000488897 SPAG8Q99932 426 aaPredicted RBP13.39□□□□□ -0.27
COL16A1-215ENST00000488897 TSPAN13O95857 204 aa13.38□□□□□ -0.27
COL16A1-215ENST00000488897 GAGE12HA6NDE8 117 aa13.38□□□□□ -0.27
COL16A1-215ENST00000488897 SPINK13Q1W4C9 94 aa13.38□□□□□ -0.27
COL16A1-215ENST00000488897 J3QQQ9 107 aa13.37□□□□□ -0.27
COL16A1-215ENST00000488897 APOMO95445 188 aa13.37□□□□□ -0.27
COL16A1-215ENST00000488897 TRGV11A0A075B6L2 103 aa13.37□□□□□ -0.27
COL16A1-215ENST00000488897 IGHV3-30P01768 117 aa13.37□□□□□ -0.27
COL16A1-215ENST00000488897 IGHV3-30-5P0DP03 117 aa13.37□□□□□ -0.27
COL16A1-215ENST00000488897 LGALS3P17931 250 aaKnown RBP13.37□□□□□ -0.27
COL16A1-215ENST00000488897 TSPEAR-AS2P59090 65 aa13.37□□□□□ -0.27
COL16A1-215ENST00000488897 MTURNQ8N3F0 131 aa13.37□□□□□ -0.27
COL16A1-215ENST00000488897 LOC107984156A0A0G2JMH3 177 aa13.36□□□□□ -0.27
COL16A1-215ENST00000488897 I3L3M4 83 aa13.36□□□□□ -0.27
COL16A1-215ENST00000488897 UBE2D3P61077 147 aa13.36□□□□□ -0.27
COL16A1-215ENST00000488897 UBE2D2P62837 147 aa13.36□□□□□ -0.27
COL16A1-215ENST00000488897 ARL17AQ8IVW1 177 aa13.36□□□□□ -0.27
COL16A1-215ENST00000488897 SCGB1A1P11684 91 aa13.35□□□□□ -0.27
COL16A1-215ENST00000488897 CFAP126Q5VTH2 177 aa13.35□□□□□ -0.27
COL16A1-215ENST00000488897 C20orf203Q8NBC4 194 aa13.35□□□□□ -0.27
COL16A1-215ENST00000488897 SPATA25Q9BR10 227 aa13.35□□□□□ -0.27
COL16A1-215ENST00000488897 PRB2P02812 416 aaPredicted RBP13.35□□□□□ -0.27
COL16A1-215ENST00000488897 LEPROTO15243 131 aa13.34□□□□□ -0.27
COL16A1-215ENST00000488897 P0DMU3 169 aa13.34□□□□□ -0.27
COL16A1-215ENST00000488897 FAM231AP0DMU4 169 aa13.34□□□□□ -0.27
COL16A1-215ENST00000488897 FAM231CP0DMU5 169 aa13.34□□□□□ -0.27
COL16A1-215ENST00000488897 PSMB2P49721 201 aa13.34□□□□□ -0.27
COL16A1-215ENST00000488897 ATP6V0E2Q8NHE4 81 aa13.34□□□□□ -0.27
COL16A1-215ENST00000488897 AMELXQ99217 191 aa13.34□□□□□ -0.27
COL16A1-215ENST00000488897 AZU1P20160 251 aa13.34□□□□□ -0.27
COL16A1-215ENST00000488897 TMEM223A0PJW6 202 aa13.33□□□□□ -0.27
COL16A1-215ENST00000488897 GTSF1LQ9H1H1 148 aa13.33□□□□□ -0.27
COL16A1-215ENST00000488897 CFC1BP0CG36 223 aa13.32□□□□□ -0.28
COL16A1-215ENST00000488897 CFC1P0CG37 223 aa13.32□□□□□ -0.28
COL16A1-215ENST00000488897 OPRPNQ99935 248 aaPredicted RBP13.32□□□□□ -0.28
COL16A1-215ENST00000488897 TRBV20-1A0A075B6N2 111 aa13.32□□□□□ -0.28
COL16A1-215ENST00000488897 C1QTNF4Q9BXJ3 329 aa13.32□□□□□ -0.28
COL16A1-215ENST00000488897 C10orf126Q8N4M7 172 aa13.31□□□□□ -0.28
COL16A1-215ENST00000488897 VCX2Q9H322 139 aa13.31□□□□□ -0.28
COL16A1-215ENST00000488897 EDA2RQ9HAV5 297 aa13.31□□□□□ -0.28
COL16A1-215ENST00000488897 SMCPP49901 116 aaPredicted RBP13.3□□□□□ -0.28
COL16A1-215ENST00000488897 FOXI1Q12951 378 aa13.3□□□□□ -0.28
COL16A1-215ENST00000488897 SFTA2Q6UW10 78 aa13.3□□□□□ -0.28
COL16A1-215ENST00000488897 PRO1854Q9UHT4 67 aa13.3□□□□□ -0.28
COL16A1-215ENST00000488897 RHODO00212 210 aa13.3□□□□□ -0.28
COL16A1-215ENST00000488897 ZNF22P17026 224 aaPredicted RBP13.3□□□□□ -0.28
COL16A1-215ENST00000488897 TMEM61Q8N0U2 210 aa13.3□□□□□ -0.28
COL16A1-215ENST00000488897 IGLV4-3A0A075B6K6 122 aa13.29□□□□□ -0.28
COL16A1-215ENST00000488897 INSL3P51460 131 aa13.29□□□□□ -0.28
COL16A1-215ENST00000488897 SMAGPQ0VAQ4 97 aa13.29□□□□□ -0.28
COL16A1-215ENST00000488897 KRTAP21-3Q3LHN1 58 aa13.29□□□□□ -0.28
COL16A1-215ENST00000488897 DYNLRB2Q8TF09 96 aa13.28□□□□□ -0.28
COL16A1-215ENST00000488897 PEMTQ9UBM1 199 aa13.28□□□□□ -0.28
COL16A1-215ENST00000488897 PYGO1Q9Y3Y4 419 aa13.28□□□□□ -0.28
COL16A1-215ENST00000488897 NBEAL2Q6ZNJ1 2754 aa13.28□□□□□ -0.28
COL16A1-215ENST00000488897 DEFB114Q30KQ6 69 aa13.28□□□□□ -0.28
COL16A1-215ENST00000488897 WFDC9Q8NEX5 89 aa13.28□□□□□ -0.28
COL16A1-215ENST00000488897 TCL1BO95988 128 aa13.27□□□□□ -0.29
COL16A1-215ENST00000488897 A0A0J9YXV3 536 aa13.27□□□□□ -0.29
COL16A1-215ENST00000488897 CRYBA4P53673 196 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms