RNA–Protein interactions for RNA: ENST00000488774.1

PTPRD-212, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 3

Gene PTPRD, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-212ENST00000488774 TMEM218A2RU14 115 aa4.29□□□□□ -1.72
PTPRD-212ENST00000488774 XKRY2A2RUG3 117 aa4.29□□□□□ -1.72
PTPRD-212ENST00000488774 LINC00862A6NCI5 91 aa4.29□□□□□ -1.72
PTPRD-212ENST00000488774 TRGC1P0CF51 173 aa4.29□□□□□ -1.72
PTPRD-212ENST00000488774 SMIM17P0DL12 118 aa4.29□□□□□ -1.72
PTPRD-212ENST00000488774 CAMPP49913 170 aa4.29□□□□□ -1.72
PTPRD-212ENST00000488774 POLR2KP53803 58 aaKnown RBP4.29□□□□□ -1.72
PTPRD-212ENST00000488774 RBX1P62877 108 aa4.29□□□□□ -1.72
PTPRD-212ENST00000488774 SH2D6Q7Z4S9 175 aa4.29□□□□□ -1.72
PTPRD-212ENST00000488774 TMEM191AQ9H0A3 160 aa4.29□□□□□ -1.72
PTPRD-212ENST00000488774 SMDT1Q9H4I9 107 aa4.29□□□□□ -1.72
PTPRD-212ENST00000488774 SDHAF1A6NFY7 115 aa4.28□□□□□ -1.72
PTPRD-212ENST00000488774 BTF3P20290 206 aaKnown RBP4.28□□□□□ -1.72
PTPRD-212ENST00000488774 IQCJQ1A5X6 159 aa4.28□□□□□ -1.72
PTPRD-212ENST00000488774 C10orf91Q5T1B1 145 aa4.28□□□□□ -1.72
PTPRD-212ENST00000488774 FAM104BQ5XKR9 115 aa4.28□□□□□ -1.72
PTPRD-212ENST00000488774 C15orf54Q8N8G6 183 aa4.28□□□□□ -1.72
PTPRD-212ENST00000488774 BAALCQ8WXS3 180 aa4.28□□□□□ -1.72
PTPRD-212ENST00000488774 TMEM70Q9BUB7 260 aa4.28□□□□□ -1.72
PTPRD-212ENST00000488774 TMEM242Q9NWH2 141 aa4.28□□□□□ -1.72
PTPRD-212ENST00000488774 FAM30AQ9NZY2 134 aa4.28□□□□□ -1.72
PTPRD-212ENST00000488774 SRRM2Q9UQ35 2752 aaKnown RBP4.28□□□□□ -1.72
PTPRD-212ENST00000488774 TRBV6-5A0A0K0K1A5 114 aa4.27□□□□□ -1.73
PTPRD-212ENST00000488774 NPYP01303 97 aa4.27□□□□□ -1.73
PTPRD-212ENST00000488774 ESDP10768 282 aa4.27□□□□□ -1.73
PTPRD-212ENST00000488774 XGP55808 180 aa4.27□□□□□ -1.73
PTPRD-212ENST00000488774 LINC00269Q8N2A0 174 aa4.27□□□□□ -1.73
PTPRD-212ENST00000488774 UBE2WQ96B02 151 aa4.27□□□□□ -1.73
PTPRD-212ENST00000488774 CHCHD5Q9BSY4 110 aa4.27□□□□□ -1.73
PTPRD-212ENST00000488774 PRR34Q9NV39 138 aa4.27□□□□□ -1.73
PTPRD-212ENST00000488774 NAT8BQ9UHF3 227 aa4.27□□□□□ -1.73
PTPRD-212ENST00000488774 IGLV10-54A0A075B6I4 117 aa4.26□□□□□ -1.73
PTPRD-212ENST00000488774 A0A087WWC5 75 aa4.26□□□□□ -1.73
PTPRD-212ENST00000488774 IGHV1-24A0A0C4DH33 117 aa4.26□□□□□ -1.73
PTPRD-212ENST00000488774 C16orf90A8MZG2 172 aa4.26□□□□□ -1.73
PTPRD-212ENST00000488774 D6R8Y8 96 aa4.26□□□□□ -1.73
PTPRD-212ENST00000488774 TMEM262E9PQX1 116 aa4.26□□□□□ -1.73
PTPRD-212ENST00000488774 SLPIP03973 132 aa4.26□□□□□ -1.73
PTPRD-212ENST00000488774 RAB14P61106 215 aa4.26□□□□□ -1.73
PTPRD-212ENST00000488774 RNASE13Q5GAN3 156 aaKnown RBP4.26□□□□□ -1.73
PTPRD-212ENST00000488774 Q8N814 137 aa4.26□□□□□ -1.73
PTPRD-212ENST00000488774 MYCBP2O75592 4640 aa4.25□□□□□ -1.73
PTPRD-212ENST00000488774 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.25□□□□□ -1.73
PTPRD-212ENST00000488774 TRBV25-1A0A075B6N4 114 aa4.25□□□□□ -1.73
PTPRD-212ENST00000488774 IGKV2D-24A0A075B6R9 120 aa4.25□□□□□ -1.73
PTPRD-212ENST00000488774 F8W036 122 aa4.25□□□□□ -1.73
PTPRD-212ENST00000488774 PANO1I0J062 215 aa4.25□□□□□ -1.73
PTPRD-212ENST00000488774 ANGP03950 147 aaKnown RBP4.25□□□□□ -1.73
PTPRD-212ENST00000488774 AMTP48728 403 aa4.25□□□□□ -1.73
PTPRD-212ENST00000488774 RPL39P62891 51 aaKnown RBP4.25□□□□□ -1.73
PTPRD-212ENST00000488774 RIGQ13278 110 aa4.25□□□□□ -1.73
PTPRD-212ENST00000488774 LAGE3Q14657 143 aa4.25□□□□□ -1.73
PTPRD-212ENST00000488774 TMEM136Q6ZRR5 245 aa4.25□□□□□ -1.73
PTPRD-212ENST00000488774 SLC7A5P1Q8MH63 180 aa4.25□□□□□ -1.73
PTPRD-212ENST00000488774 OPRPNQ99935 248 aaPredicted RBP4.25□□□□□ -1.73
PTPRD-212ENST00000488774 TMEM243Q9BU79 118 aa4.25□□□□□ -1.73
PTPRD-212ENST00000488774 TRAV9-2A0A087WT02 112 aa4.24□□□□□ -1.73
PTPRD-212ENST00000488774 A0A087WX48 190 aa4.24□□□□□ -1.73
PTPRD-212ENST00000488774 TRBV27A0A0K0K1C4 114 aa4.24□□□□□ -1.73
PTPRD-212ENST00000488774 C7orf77A4D0Y5 90 aa4.24□□□□□ -1.73
PTPRD-212ENST00000488774 H7C1H1 209 aa4.24□□□□□ -1.73
PTPRD-212ENST00000488774 TCAPO15273 167 aa4.24□□□□□ -1.73
PTPRD-212ENST00000488774 TNFRSF6BO95407 300 aa4.24□□□□□ -1.73
PTPRD-212ENST00000488774 FGF6P10767 208 aa4.24□□□□□ -1.73
PTPRD-212ENST00000488774 HBBP68871 147 aa4.24□□□□□ -1.73
PTPRD-212ENST00000488774 COTL1Q14019 142 aa4.24□□□□□ -1.73
PTPRD-212ENST00000488774 KIAA1644Q3SXP7 199 aa4.24□□□□□ -1.73
PTPRD-212ENST00000488774 ZC2HC1BQ5TFG8 222 aa4.24□□□□□ -1.73
PTPRD-212ENST00000488774 UQCC3Q6UW78 93 aa4.24□□□□□ -1.73
PTPRD-212ENST00000488774 C10orf126Q8N4M7 172 aa4.24□□□□□ -1.73
PTPRD-212ENST00000488774 MRAP2Q96G30 205 aa4.24□□□□□ -1.73
PTPRD-212ENST00000488774 IMMP2LQ96T52 175 aa4.24□□□□□ -1.73
PTPRD-212ENST00000488774 SEC11CQ9BY50 192 aa4.24□□□□□ -1.73
PTPRD-212ENST00000488774 CARHSP1Q9Y2V2 147 aaKnown RBP4.24□□□□□ -1.73
PTPRD-212ENST00000488774 URGCP-MRPS24S4R325 110 aa4.24□□□□□ -1.73
PTPRD-212ENST00000488774 LRP1Q07954 4544 aaKnown RBP4.24□□□□□ -1.73
PTPRD-212ENST00000488774 TRBV24-1A0A075B6N3 115 aa4.23□□□□□ -1.73
PTPRD-212ENST00000488774 IGKV3OR2-268A0A0C4DH90 116 aa4.23□□□□□ -1.73
PTPRD-212ENST00000488774 A0A1B0GUV1 79 aa4.23□□□□□ -1.73
PTPRD-212ENST00000488774 I3L3M4 83 aa4.23□□□□□ -1.73
PTPRD-212ENST00000488774 PRSS1P07477 247 aa4.23□□□□□ -1.73
PTPRD-212ENST00000488774 PMCHP20382 165 aa4.23□□□□□ -1.73
PTPRD-212ENST00000488774 SUMO2P61956 95 aaKnown RBP4.23□□□□□ -1.73
PTPRD-212ENST00000488774 REG3AQ06141 175 aa4.23□□□□□ -1.73
PTPRD-212ENST00000488774 NFE4Q86UQ8 179 aa4.23□□□□□ -1.73
PTPRD-212ENST00000488774 C15orf56Q8N910 161 aa4.23□□□□□ -1.73
PTPRD-212ENST00000488774 CLRN3Q8NCR9 226 aa4.23□□□□□ -1.73
PTPRD-212ENST00000488774 YPEL4Q96NS1 127 aa4.23□□□□□ -1.73
PTPRD-212ENST00000488774 ST20Q9HBF5 79 aa4.23□□□□□ -1.73
PTPRD-212ENST00000488774 TRAV8-3A0A0A6YYJ7 113 aa4.22□□□□□ -1.73
PTPRD-212ENST00000488774 TGIF2-C20orf24A0A0A6YYL0 155 aa4.22□□□□□ -1.73
PTPRD-212ENST00000488774 LOC389332A0A1B0GUA5 103 aa4.22□□□□□ -1.73
PTPRD-212ENST00000488774 USP17L23D6RBM5 183 aa4.22□□□□□ -1.73
PTPRD-212ENST00000488774 K7EP13 123 aa4.22□□□□□ -1.73
PTPRD-212ENST00000488774 PSCAO43653 123 aa4.22□□□□□ -1.73
PTPRD-212ENST00000488774 HLA-DQA1P01909 254 aa4.22□□□□□ -1.73
PTPRD-212ENST00000488774 APCSP02743 223 aa4.22□□□□□ -1.73
PTPRD-212ENST00000488774 MT-ND4LP03901 98 aa4.22□□□□□ -1.73
PTPRD-212ENST00000488774 CKS2P33552 79 aa4.22□□□□□ -1.73
PTPRD-212ENST00000488774 PNRC1Q12796 327 aaPredicted RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms