RNA–Protein interactions for RNA: ENST00000488536.1

UBA7-208, Transcript of ubiquitin like modifier activating enzyme 7, human

TSL 2

Gene UBA7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA7-208	ENST00000488536	TRBV7-3	A0A075B6L6	115 aa		10.1	□□□□□ -0.79
UBA7-208	ENST00000488536		K7EQD1	137 aa		10.1	□□□□□ -0.79
UBA7-208	ENST00000488536	CITED1	Q99966	193 aa		10.1	□□□□□ -0.79
UBA7-208	ENST00000488536	GCN1	Q92616	2671 aa	Known RBP	10.1	□□□□□ -0.79
UBA7-208	ENST00000488536	TRBV6-4	A0A1B0GX49	114 aa		10.09	□□□□□ -0.79
UBA7-208	ENST00000488536		Q6ZSN1	163 aa		10.09	□□□□□ -0.79
UBA7-208	ENST00000488536	CEND1	Q8N111	149 aa		10.09	□□□□□ -0.79
UBA7-208	ENST00000488536	CHCHD7	Q9BUK0	85 aa		10.09	□□□□□ -0.79
UBA7-208	ENST00000488536	ANK3	Q12955	4377 aa	Known RBP	10.09	□□□□□ -0.79
UBA7-208	ENST00000488536	PRM2	P04554	102 aa		10.08	□□□□□ -0.8
UBA7-208	ENST00000488536	RPL35A	P18077	110 aa	Known RBP	10.08	□□□□□ -0.8
UBA7-208	ENST00000488536	UBE2V1	Q13404	147 aa		10.08	□□□□□ -0.8
UBA7-208	ENST00000488536	KIR2DL5B	Q8NHK3	375 aa		10.08	□□□□□ -0.8
UBA7-208	ENST00000488536	PLEKHB2	Q96CS7	222 aa		10.08	□□□□□ -0.8
UBA7-208	ENST00000488536	GTSF1L	Q9H1H1	148 aa		10.08	□□□□□ -0.8
UBA7-208	ENST00000488536	CSDC2	Q9Y534	153 aa	Known RBP	10.08	□□□□□ -0.8
UBA7-208	ENST00000488536	PLAC8L1	A1L4L8	177 aa		10.07	□□□□□ -0.8
UBA7-208	ENST00000488536		H7C423	109 aa		10.07	□□□□□ -0.8
UBA7-208	ENST00000488536	LEPROT	O15243	131 aa		10.07	□□□□□ -0.8
UBA7-208	ENST00000488536	SMIM13	P0DJ93	91 aa		10.07	□□□□□ -0.8
UBA7-208	ENST00000488536	TMEM170B	Q5T4T1	132 aa		10.07	□□□□□ -0.8
UBA7-208	ENST00000488536		Q6ZTI0	123 aa		10.07	□□□□□ -0.8
UBA7-208	ENST00000488536	MAPKAPK5-AS1	Q8N8E1	139 aa		10.07	□□□□□ -0.8
UBA7-208	ENST00000488536	NOP10	Q9NPE3	64 aa	Known RBP	10.07	□□□□□ -0.8
UBA7-208	ENST00000488536	UBE2D4	Q9Y2X8	147 aa		10.07	□□□□□ -0.8
UBA7-208	ENST00000488536	MTOR	P42345	2549 aa		10.06	□□□□□ -0.8
UBA7-208	ENST00000488536	TMEM238L	A0A1B0GVL6	79 aa		10.06	□□□□□ -0.8
UBA7-208	ENST00000488536	TINCR	A0A1B0GVN0	87 aa		10.06	□□□□□ -0.8
UBA7-208	ENST00000488536	TMEM223	A0PJW6	202 aa		10.06	□□□□□ -0.8
UBA7-208	ENST00000488536	C9orf118	A6NHY6	69 aa		10.06	□□□□□ -0.8
UBA7-208	ENST00000488536		A6NJY4	79 aa		10.06	□□□□□ -0.8
UBA7-208	ENST00000488536	ZNF815P	A8K554	130 aa		10.06	□□□□□ -0.8
UBA7-208	ENST00000488536	WIPF1	O43516	503 aa		10.06	□□□□□ -0.8
UBA7-208	ENST00000488536	TCTA	P57738	103 aa		10.06	□□□□□ -0.8
UBA7-208	ENST00000488536	NBPF19	A0A087WUL8	3843 aa		10.05	□□□□□ -0.8
UBA7-208	ENST00000488536	TRGV2	A0A075B6R0	118 aa		10.05	□□□□□ -0.8
UBA7-208	ENST00000488536	GCSH	P23434	173 aa		10.05	□□□□□ -0.8
UBA7-208	ENST00000488536	PTTG1IP	P53801	180 aa		10.05	□□□□□ -0.8
UBA7-208	ENST00000488536	UBE2D3	P61077	147 aa		10.05	□□□□□ -0.8
UBA7-208	ENST00000488536	UBE2D2	P62837	147 aa		10.05	□□□□□ -0.8
UBA7-208	ENST00000488536	VAMP3	Q15836	100 aa		10.05	□□□□□ -0.8
UBA7-208	ENST00000488536	WFDC9	Q8NEX5	89 aa		10.05	□□□□□ -0.8
UBA7-208	ENST00000488536	ZNRF2	Q8NHG8	242 aa		10.05	□□□□□ -0.8
UBA7-208	ENST00000488536	ZNF479	Q96JC4	524 aa		10.05	□□□□□ -0.8
UBA7-208	ENST00000488536	HIST1H4G	Q99525	98 aa		10.05	□□□□□ -0.8
UBA7-208	ENST00000488536	SPANXB1	Q9NS25	103 aa	Predicted RBP	10.05	□□□□□ -0.8
UBA7-208	ENST00000488536	ZNF469	Q96JG9	3925 aa	Predicted RBP	10.05	□□□□□ -0.8
UBA7-208	ENST00000488536	LGALS3	P17931	250 aa	Known RBP	10.04	□□□□□ -0.8
UBA7-208	ENST00000488536	APOC4	P55056	127 aa		10.04	□□□□□ -0.8
UBA7-208	ENST00000488536	LINC00612	Q8N6U2	182 aa		10.04	□□□□□ -0.8
UBA7-208	ENST00000488536	WFDC10A	Q9H1F0	79 aa		10.04	□□□□□ -0.8
UBA7-208	ENST00000488536	AKAP9	Q99996	3911 aa		10.04	□□□□□ -0.8
UBA7-208	ENST00000488536		J3QQQ9	107 aa		10.03	□□□□□ -0.8
UBA7-208	ENST00000488536	ZNF22	P17026	224 aa	Predicted RBP	10.03	□□□□□ -0.8
UBA7-208	ENST00000488536	TIRAP	P58753	221 aa		10.03	□□□□□ -0.8
UBA7-208	ENST00000488536	DGAT2L7P	Q6IED9	249 aa		10.03	□□□□□ -0.8
UBA7-208	ENST00000488536	SCGB1D4	Q6XE38	83 aa		10.03	□□□□□ -0.8
UBA7-208	ENST00000488536	GTF2H5	Q6ZYL4	71 aa		10.03	□□□□□ -0.8
UBA7-208	ENST00000488536	FAM19A3	Q7Z5A8	133 aa		10.03	□□□□□ -0.8
UBA7-208	ENST00000488536	TTTY13	Q9BZ97	58 aa		10.03	□□□□□ -0.8
UBA7-208	ENST00000488536	HECTD1	Q9ULT8	2610 aa		10.03	□□□□□ -0.8
UBA7-208	ENST00000488536	NACA	E9PAV3	2078 aa		10.02	□□□□□ -0.81
UBA7-208	ENST00000488536	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	10.02	□□□□□ -0.81
UBA7-208	ENST00000488536	SLC25A29	Q8N8R3	303 aa		10.02	□□□□□ -0.81
UBA7-208	ENST00000488536	TRGV4	A0A0C4DH28	118 aa		10.01	□□□□□ -0.81
UBA7-208	ENST00000488536		A0A0J9YXV3	536 aa		10.01	□□□□□ -0.81
UBA7-208	ENST00000488536		A0A1B0GWB2	263 aa		10.01	□□□□□ -0.81
UBA7-208	ENST00000488536	GAGE12B	A1L429	117 aa		10.01	□□□□□ -0.81
UBA7-208	ENST00000488536	LYRM9	A8MSI8	78 aa		10.01	□□□□□ -0.81
UBA7-208	ENST00000488536	GAGE7	O76087	117 aa		10.01	□□□□□ -0.81
UBA7-208	ENST00000488536	GAGE12F	P0CL80	117 aa		10.01	□□□□□ -0.81
UBA7-208	ENST00000488536	GAGE12G	P0CL81	117 aa		10.01	□□□□□ -0.81
UBA7-208	ENST00000488536	GAGE12I	P0CL82	117 aa		10.01	□□□□□ -0.81
UBA7-208	ENST00000488536	NF1	P21359	2839 aa		10	□□□□□ -0.81
UBA7-208	ENST00000488536	IGLV5-45	A0A087WSX0	123 aa		10	□□□□□ -0.81
UBA7-208	ENST00000488536	FXYD2	P54710	66 aa		10	□□□□□ -0.81
UBA7-208	ENST00000488536	OR5A1	Q8NGJ0	315 aa		10	□□□□□ -0.81
UBA7-208	ENST00000488536	PHLDA1	Q8WV24	401 aa	Predicted RBP	10	□□□□□ -0.81
UBA7-208	ENST00000488536	FAM104A	Q969W3	186 aa		10	□□□□□ -0.81
UBA7-208	ENST00000488536	OPRPN	Q99935	248 aa	Predicted RBP	10	□□□□□ -0.81
UBA7-208	ENST00000488536	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	9.99	□□□□□ -0.81
UBA7-208	ENST00000488536		A0A0J9YY99	117 aa		9.99	□□□□□ -0.81
UBA7-208	ENST00000488536	IGKV2-29	A2NJV5	120 aa	Predicted RBP	9.99	□□□□□ -0.81
UBA7-208	ENST00000488536	UBE2D1	P51668	147 aa		9.99	□□□□□ -0.81
UBA7-208	ENST00000488536	EMP1	P54849	157 aa		9.99	□□□□□ -0.81
UBA7-208	ENST00000488536	SBSPON	Q8IVN8	264 aa		9.99	□□□□□ -0.81
UBA7-208	ENST00000488536	DEFB104A	Q8WTQ1	72 aa		9.99	□□□□□ -0.81
UBA7-208	ENST00000488536	TMEM101	Q96IK0	257 aa		9.99	□□□□□ -0.81
UBA7-208	ENST00000488536	TMEM243	Q9BU79	118 aa		9.99	□□□□□ -0.81
UBA7-208	ENST00000488536	GEMIN7	Q9H840	131 aa	Known RBP	9.99	□□□□□ -0.81
UBA7-208	ENST00000488536	WNK1	Q9H4A3	2382 aa		9.99	□□□□□ -0.81
UBA7-208	ENST00000488536	IGHV1-58	A0A0C4DH39	117 aa		9.98	□□□□□ -0.81
UBA7-208	ENST00000488536	FABP2	P12104	132 aa		9.98	□□□□□ -0.81
UBA7-208	ENST00000488536	HERVK_113	P63121	156 aa		9.98	□□□□□ -0.81
UBA7-208	ENST00000488536	SRSF9	Q13242	221 aa	Known RBP eCLIP	9.98	□□□□□ -0.81
UBA7-208	ENST00000488536	FHL2	Q14192	279 aa		9.98	□□□□□ -0.81
UBA7-208	ENST00000488536		Q9UF83	564 aa		9.98	□□□□□ -0.81
UBA7-208	ENST00000488536	OTOG	Q6ZRI0	2925 aa		9.98	□□□□□ -0.81
UBA7-208	ENST00000488536	IGHV3-38	A0A0C4DH36	116 aa		9.97	□□□□□ -0.81
UBA7-208	ENST00000488536		A0A1W2PPM0	123 aa		9.97	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 42 ms