RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 ATRAIDQ6UW56 229 aa9.42□□□□□ -0.9
COL9A2-208ENST00000488463 KLK12Q9UKR0 248 aa9.42□□□□□ -0.9
COL9A2-208ENST00000488463 VPS13BQ7Z7G8 4022 aa9.41□□□□□ -0.9
COL9A2-208ENST00000488463 H7C1H1 209 aa9.41□□□□□ -0.9
COL9A2-208ENST00000488463 IQCJQ1A5X6 159 aa9.41□□□□□ -0.9
COL9A2-208ENST00000488463 MPV17L2Q567V2 206 aa9.41□□□□□ -0.9
COL9A2-208ENST00000488463 GATD1Q8NB37 220 aa9.41□□□□□ -0.9
COL9A2-208ENST00000488463 NIT2Q9NQR4 276 aa9.41□□□□□ -0.9
COL9A2-208ENST00000488463 SRRM2Q9UQ35 2752 aaKnown RBP9.4□□□□□ -0.9
COL9A2-208ENST00000488463 A0A087WX48 190 aa9.4□□□□□ -0.9
COL9A2-208ENST00000488463 PSCAO43653 123 aa9.4□□□□□ -0.9
COL9A2-208ENST00000488463 KRTAP10-1P60331 282 aa9.4□□□□□ -0.9
COL9A2-208ENST00000488463 COX19Q49B96 90 aa9.4□□□□□ -0.9
COL9A2-208ENST00000488463 TMEM97Q5BJF2 176 aa9.4□□□□□ -0.9
COL9A2-208ENST00000488463 ATP5L2Q7Z4Y8 100 aa9.4□□□□□ -0.9
COL9A2-208ENST00000488463 NUP35Q8NFH5 326 aa9.4□□□□□ -0.9
COL9A2-208ENST00000488463 TM2D2Q9BX73 214 aa9.4□□□□□ -0.9
COL9A2-208ENST00000488463 URGCP-MRPS24S4R325 110 aa9.4□□□□□ -0.9
COL9A2-208ENST00000488463 TRAV26-2A0A0B4J265 109 aa9.39□□□□□ -0.91
COL9A2-208ENST00000488463 ENHOQ6UWT2 76 aa9.39□□□□□ -0.91
COL9A2-208ENST00000488463 Q8N814 137 aa9.39□□□□□ -0.91
COL9A2-208ENST00000488463 Q8N976 141 aa9.38□□□□□ -0.91
COL9A2-208ENST00000488463 FRZBQ92765 325 aa9.38□□□□□ -0.91
COL9A2-208ENST00000488463 UBE2WQ96B02 151 aa9.38□□□□□ -0.91
COL9A2-208ENST00000488463 CHCHD5Q9BSY4 110 aa9.38□□□□□ -0.91
COL9A2-208ENST00000488463 TRBV25-1A0A075B6N4 114 aa9.37□□□□□ -0.91
COL9A2-208ENST00000488463 TMEM262E9PQX1 116 aa9.37□□□□□ -0.91
COL9A2-208ENST00000488463 RBX1P62877 108 aa9.37□□□□□ -0.91
COL9A2-208ENST00000488463 HBBP68871 147 aa9.37□□□□□ -0.91
COL9A2-208ENST00000488463 ELOBQ15370 118 aa9.37□□□□□ -0.91
COL9A2-208ENST00000488463 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.37□□□□□ -0.91
COL9A2-208ENST00000488463 PRR34Q9NV39 138 aa9.37□□□□□ -0.91
COL9A2-208ENST00000488463 IGHV1-24A0A0C4DH33 117 aa9.36□□□□□ -0.91
COL9A2-208ENST00000488463 GAS8-AS1O95177 125 aa9.36□□□□□ -0.91
COL9A2-208ENST00000488463 XGP55808 180 aa9.36□□□□□ -0.91
COL9A2-208ENST00000488463 GAGE6Q13070 117 aa9.36□□□□□ -0.91
COL9A2-208ENST00000488463 MRPL54Q6P161 138 aaKnown RBP9.36□□□□□ -0.91
COL9A2-208ENST00000488463 NTN5Q8WTR8 489 aaPredicted RBP9.36□□□□□ -0.91
COL9A2-208ENST00000488463 RPL39LQ96EH5 51 aaKnown RBP9.36□□□□□ -0.91
COL9A2-208ENST00000488463 COX11Q9Y6N1 276 aa9.36□□□□□ -0.91
COL9A2-208ENST00000488463 LECT2O14960 151 aa9.35□□□□□ -0.91
COL9A2-208ENST00000488463 CAMPP49913 170 aa9.35□□□□□ -0.91
COL9A2-208ENST00000488463 KRTAP26-1Q6PEX3 210 aa9.35□□□□□ -0.91
COL9A2-208ENST00000488463 DEFB104AQ8WTQ1 72 aa9.35□□□□□ -0.91
COL9A2-208ENST00000488463 BAALCQ8WXS3 180 aa9.35□□□□□ -0.91
COL9A2-208ENST00000488463 RNF185Q96GF1 192 aa9.35□□□□□ -0.91
COL9A2-208ENST00000488463 TMEM191AQ9H0A3 160 aa9.35□□□□□ -0.91
COL9A2-208ENST00000488463 IGKV2D-24A0A075B6R9 120 aa9.34□□□□□ -0.91
COL9A2-208ENST00000488463 GCSHP23434 173 aa9.34□□□□□ -0.91
COL9A2-208ENST00000488463 PKIAP61925 76 aa9.34□□□□□ -0.91
COL9A2-208ENST00000488463 Q0VG73 95 aa9.34□□□□□ -0.91
COL9A2-208ENST00000488463 C20orf203Q8NBC4 194 aa9.34□□□□□ -0.91
COL9A2-208ENST00000488463 RMI2Q96E14 147 aa9.34□□□□□ -0.91
COL9A2-208ENST00000488463 TRBV24-1A0A075B6N3 115 aa9.33□□□□□ -0.92
COL9A2-208ENST00000488463 IGLV5-52A0A0A0MRZ9 124 aa9.33□□□□□ -0.92
COL9A2-208ENST00000488463 TRBV6-5A0A0K0K1A5 114 aa9.33□□□□□ -0.92
COL9A2-208ENST00000488463 A0A1B0GUV1 79 aa9.33□□□□□ -0.92
COL9A2-208ENST00000488463 ANGP03950 147 aaKnown RBP9.33□□□□□ -0.92
COL9A2-208ENST00000488463 CBLN2Q8IUK8 224 aa9.33□□□□□ -0.92
COL9A2-208ENST00000488463 Q8N1X5 172 aa9.33□□□□□ -0.92
COL9A2-208ENST00000488463 TMEM243Q9BU79 118 aa9.33□□□□□ -0.92
COL9A2-208ENST00000488463 IGLV4-60A0A075B6I1 120 aa9.32□□□□□ -0.92
COL9A2-208ENST00000488463 MT-ND6P03923 174 aa9.32□□□□□ -0.92
COL9A2-208ENST00000488463 RAB4AP20338 218 aa9.32□□□□□ -0.92
COL9A2-208ENST00000488463 LINC00269Q8N2A0 174 aa9.32□□□□□ -0.92
COL9A2-208ENST00000488463 SDHAF1A6NFY7 115 aa9.31□□□□□ -0.92
COL9A2-208ENST00000488463 PPP1R17O96001 155 aa9.31□□□□□ -0.92
COL9A2-208ENST00000488463 HLA-DQA1P01909 254 aa9.31□□□□□ -0.92
COL9A2-208ENST00000488463 RPS10P46783 165 aaKnown RBP9.31□□□□□ -0.92
COL9A2-208ENST00000488463 COTL1Q14019 142 aa9.31□□□□□ -0.92
COL9A2-208ENST00000488463 MIAQ16674 131 aa9.31□□□□□ -0.92
COL9A2-208ENST00000488463 GNB1LQ9BYB4 327 aa9.31□□□□□ -0.92
COL9A2-208ENST00000488463 TGIF2-C20orf24A0A0A6YYL0 155 aa9.3□□□□□ -0.92
COL9A2-208ENST00000488463 A0A1B0GXF2 115 aa9.3□□□□□ -0.92
COL9A2-208ENST00000488463 CRPP02741 224 aa9.3□□□□□ -0.92
COL9A2-208ENST00000488463 CLPSL2Q6UWE3 100 aa9.3□□□□□ -0.92
COL9A2-208ENST00000488463 AMN1Q8IY45 258 aa9.3□□□□□ -0.92
COL9A2-208ENST00000488463 C1orf43Q9BWL3 253 aa9.3□□□□□ -0.92
COL9A2-208ENST00000488463 FAM30AQ9NZY2 134 aa9.3□□□□□ -0.92
COL9A2-208ENST00000488463 NCR2O95944 276 aa9.29□□□□□ -0.92
COL9A2-208ENST00000488463 APCSP02743 223 aa9.29□□□□□ -0.92
COL9A2-208ENST00000488463 PPBPP02775 128 aa9.29□□□□□ -0.92
COL9A2-208ENST00000488463 AMTP48728 403 aa9.29□□□□□ -0.92
COL9A2-208ENST00000488463 POLR2KP53803 58 aaKnown RBP9.29□□□□□ -0.92
COL9A2-208ENST00000488463 TMEM70Q9BUB7 260 aa9.29□□□□□ -0.92
COL9A2-208ENST00000488463 TRAPPC1Q9Y5R8 145 aa9.29□□□□□ -0.92
COL9A2-208ENST00000488463 MYCBP2O75592 4640 aa9.28□□□□□ -0.92
COL9A2-208ENST00000488463 HERC1Q15751 4861 aa9.28□□□□□ -0.92
COL9A2-208ENST00000488463 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.28□□□□□ -0.92
COL9A2-208ENST00000488463 SCO1O75880 301 aa9.28□□□□□ -0.92
COL9A2-208ENST00000488463 REG3AQ06141 175 aa9.28□□□□□ -0.92
COL9A2-208ENST00000488463 FAM104BQ5XKR9 115 aa9.28□□□□□ -0.92
COL9A2-208ENST00000488463 Q6ZSA8 131 aa9.28□□□□□ -0.92
COL9A2-208ENST00000488463 NRACQ8N912 160 aa9.28□□□□□ -0.92
COL9A2-208ENST00000488463 MRAP2Q96G30 205 aa9.28□□□□□ -0.92
COL9A2-208ENST00000488463 SMKR1H3BMG3 65 aa9.27□□□□□ -0.93
COL9A2-208ENST00000488463 I3L3M4 83 aa9.27□□□□□ -0.93
COL9A2-208ENST00000488463 TSHBP01222 138 aa9.27□□□□□ -0.93
COL9A2-208ENST00000488463 ESDP10768 282 aa9.27□□□□□ -0.93
COL9A2-208ENST00000488463 CKS2P33552 79 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms