RNA–Protein interactions for RNA: ENST00000488175.5

GCOM1-210, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,601 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-210ENST00000488175 NRGNQ92686 78 aa11.97□□□□□ -0.49
GCOM1-210ENST00000488175 NDUFA12Q9UI09 145 aa11.97□□□□□ -0.49
GCOM1-210ENST00000488175 UTP20O75691 2785 aaKnown RBP11.97□□□□□ -0.49
GCOM1-210ENST00000488175 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.96□□□□□ -0.49
GCOM1-210ENST00000488175 IGKV2-29A2NJV5 120 aaPredicted RBP11.96□□□□□ -0.49
GCOM1-210ENST00000488175 FLNCQ14315 2725 aa11.96□□□□□ -0.5
GCOM1-210ENST00000488175 HOXD3P31249 432 aaPredicted RBP11.96□□□□□ -0.5
GCOM1-210ENST00000488175 ZFAND6Q6FIF0 208 aa11.96□□□□□ -0.5
GCOM1-210ENST00000488175 PYGO1Q9Y3Y4 419 aa11.96□□□□□ -0.5
GCOM1-210ENST00000488175 IGHV3-38A0A0C4DH36 116 aa11.95□□□□□ -0.5
GCOM1-210ENST00000488175 IGHV1-58A0A0C4DH39 117 aa11.95□□□□□ -0.5
GCOM1-210ENST00000488175 TEX29Q8N6K0 151 aa11.95□□□□□ -0.5
GCOM1-210ENST00000488175 B4DSR2 109 aa11.95□□□□□ -0.5
GCOM1-210ENST00000488175 CRLF1O75462 422 aa11.95□□□□□ -0.5
GCOM1-210ENST00000488175 DEFB131AP59861 70 aa11.94□□□□□ -0.5
GCOM1-210ENST00000488175 MAPK1IP1LQ8NDC0 245 aa11.94□□□□□ -0.5
GCOM1-210ENST00000488175 ANAPC13Q9BS18 74 aa11.94□□□□□ -0.5
GCOM1-210ENST00000488175 CFAP46Q8IYW2 2715 aa11.94□□□□□ -0.5
GCOM1-210ENST00000488175 TRBV30A0A0K0K1B3 111 aa11.94□□□□□ -0.5
GCOM1-210ENST00000488175 DAND5Q8N907 189 aa11.94□□□□□ -0.5
GCOM1-210ENST00000488175 DUX3Q96PT4 197 aa11.94□□□□□ -0.5
GCOM1-210ENST00000488175 PRRC2AP48634 2157 aaKnown RBP11.94□□□□□ -0.5
GCOM1-210ENST00000488175 TRAV4A0A0B4J268 109 aa11.93□□□□□ -0.5
GCOM1-210ENST00000488175 DEFB136Q30KP8 78 aa11.93□□□□□ -0.5
GCOM1-210ENST00000488175 VSIG2Q96IQ7 327 aa11.93□□□□□ -0.5
GCOM1-210ENST00000488175 M0QXV9 152 aa11.93□□□□□ -0.5
GCOM1-210ENST00000488175 CITED1Q99966 193 aa11.93□□□□□ -0.5
GCOM1-210ENST00000488175 ICOSQ9Y6W8 199 aa11.93□□□□□ -0.5
GCOM1-210ENST00000488175 TRBV10-2A0A0K0K1G8 114 aa11.92□□□□□ -0.5
GCOM1-210ENST00000488175 CHCHD7Q9BUK0 85 aa11.92□□□□□ -0.5
GCOM1-210ENST00000488175 C18orf65Q6ZTR6 163 aa11.92□□□□□ -0.5
GCOM1-210ENST00000488175 CLEC2BQ92478 149 aa11.92□□□□□ -0.5
GCOM1-210ENST00000488175 UBE2D4Q9Y2X8 147 aa11.92□□□□□ -0.5
GCOM1-210ENST00000488175 RBMY1BA6NDE4 496 aaKnown RBP11.91□□□□□ -0.5
GCOM1-210ENST00000488175 RBMY1EA6NEQ0 496 aaKnown RBP11.91□□□□□ -0.5
GCOM1-210ENST00000488175 RBMY1DP0C7P1 496 aaKnown RBP11.91□□□□□ -0.5
GCOM1-210ENST00000488175 LINC00467Q9BRT7 94 aa11.91□□□□□ -0.5
GCOM1-210ENST00000488175 C2orf82Q6UX34 121 aa11.91□□□□□ -0.5
GCOM1-210ENST00000488175 POLQO75417 2590 aa11.91□□□□□ -0.5
GCOM1-210ENST00000488175 SNCGO76070 127 aa11.9□□□□□ -0.5
GCOM1-210ENST00000488175 SLURP1P55000 103 aa11.9□□□□□ -0.5
GCOM1-210ENST00000488175 MIAQ16674 131 aa11.9□□□□□ -0.5
GCOM1-210ENST00000488175 TINCRA0A1B0GVN0 87 aa11.9□□□□□ -0.5
GCOM1-210ENST00000488175 H7C423 109 aa11.9□□□□□ -0.5
GCOM1-210ENST00000488175 GAGE2BQ13066 116 aa11.9□□□□□ -0.51
GCOM1-210ENST00000488175 GAGE2EQ4V326 116 aa11.9□□□□□ -0.51
GCOM1-210ENST00000488175 SPANXDQ9BXN6 97 aa11.9□□□□□ -0.51
GCOM1-210ENST00000488175 SPANXCQ9NY87 97 aa11.9□□□□□ -0.51
GCOM1-210ENST00000488175 GAGE2DQ9UEU5 116 aa11.9□□□□□ -0.51
GCOM1-210ENST00000488175 MXRA5Q9NR99 2828 aa11.89□□□□□ -0.51
GCOM1-210ENST00000488175 USP9XQ93008 2570 aaPredicted RBP11.89□□□□□ -0.51
GCOM1-210ENST00000488175 H3BMM0 161 aa11.89□□□□□ -0.51
GCOM1-210ENST00000488175 HIST2H2BDQ6DRA6 164 aa11.89□□□□□ -0.51
GCOM1-210ENST00000488175 CDKN2A-AS1Q9UH64 79 aa11.89□□□□□ -0.51
GCOM1-210ENST00000488175 TRAV8-4A0A0B4J246 113 aa11.89□□□□□ -0.51
GCOM1-210ENST00000488175 RNF152Q8N8N0 203 aa11.89□□□□□ -0.51
GCOM1-210ENST00000488175 UBE2WQ96B02 151 aa11.89□□□□□ -0.51
GCOM1-210ENST00000488175 EDA2RQ9HAV5 297 aa11.88□□□□□ -0.51
GCOM1-210ENST00000488175 NHLRC4P0CG21 123 aaPredicted RBP11.88□□□□□ -0.51
GCOM1-210ENST00000488175 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.88□□□□□ -0.51
GCOM1-210ENST00000488175 CENPEQ02224 2701 aa11.87□□□□□ -0.51
GCOM1-210ENST00000488175 A0A0U1RRA0 63 aa11.87□□□□□ -0.51
GCOM1-210ENST00000488175 TMEM89A2RUT3 159 aa11.87□□□□□ -0.51
GCOM1-210ENST00000488175 RPL13AP40429 203 aaKnown RBP11.87□□□□□ -0.51
GCOM1-210ENST00000488175 SPANXA1Q9NS26 97 aa11.87□□□□□ -0.51
GCOM1-210ENST00000488175 COX6CP09669 75 aa11.87□□□□□ -0.51
GCOM1-210ENST00000488175 TMEM61Q8N0U2 210 aa11.87□□□□□ -0.51
GCOM1-210ENST00000488175 LINC01587Q99440 93 aa11.87□□□□□ -0.51
GCOM1-210ENST00000488175 PKD1L2Q7Z442 2459 aa11.87□□□□□ -0.51
GCOM1-210ENST00000488175 ZNF625Q96I27 306 aaPredicted RBP11.86□□□□□ -0.51
GCOM1-210ENST00000488175 UBE2E2Q96LR5 201 aa11.86□□□□□ -0.51
GCOM1-210ENST00000488175 PRORYQ9H606 182 aa11.86□□□□□ -0.51
GCOM1-210ENST00000488175 C15orf53Q8NAA6 179 aa11.85□□□□□ -0.51
GCOM1-210ENST00000488175 COX6A2Q02221 97 aa11.85□□□□□ -0.51
GCOM1-210ENST00000488175 ZNF415Q09FC8 603 aa11.85□□□□□ -0.51
GCOM1-210ENST00000488175 TMEM101Q96IK0 257 aa11.85□□□□□ -0.51
GCOM1-210ENST00000488175 ZNF702PQ9H963 129 aa11.85□□□□□ -0.51
GCOM1-210ENST00000488175 DOPEY1Q5JWR5 2465 aa11.84□□□□□ -0.51
GCOM1-210ENST00000488175 NDUFV3P56181 108 aaKnown RBP11.84□□□□□ -0.51
GCOM1-210ENST00000488175 SS18L2Q9UHA2 77 aa11.84□□□□□ -0.51
GCOM1-210ENST00000488175 VPREB3Q9UKI3 123 aa11.84□□□□□ -0.51
GCOM1-210ENST00000488175 B5MCH6 92 aa11.83□□□□□ -0.52
GCOM1-210ENST00000488175 TTC32Q5I0X7 151 aa11.83□□□□□ -0.52
GCOM1-210ENST00000488175 DGAT2L7PQ6IED9 249 aa11.83□□□□□ -0.52
GCOM1-210ENST00000488175 LINC01356Q8N9X3 169 aa11.83□□□□□ -0.52
GCOM1-210ENST00000488175 LINC01600Q96MT4 127 aa11.83□□□□□ -0.52
GCOM1-210ENST00000488175 NACAE9PAV3 2078 aa11.83□□□□□ -0.52
GCOM1-210ENST00000488175 LST1O00453 97 aa11.83□□□□□ -0.52
GCOM1-210ENST00000488175 NDUFA7O95182 113 aa11.83□□□□□ -0.52
GCOM1-210ENST00000488175 MYO9AB2RTY4 2548 aa11.83□□□□□ -0.52
GCOM1-210ENST00000488175 IGHV3-53P01767 116 aa11.82□□□□□ -0.52
GCOM1-210ENST00000488175 C11orf72Q8NBR9 251 aa11.82□□□□□ -0.52
GCOM1-210ENST00000488175 YAE1D1Q9NRH1 226 aa11.82□□□□□ -0.52
GCOM1-210ENST00000488175 GAGE5Q13069 117 aa11.81□□□□□ -0.52
GCOM1-210ENST00000488175 GAGE6Q13070 117 aa11.81□□□□□ -0.52
GCOM1-210ENST00000488175 CITED2Q99967 270 aaPredicted RBP11.81□□□□□ -0.52
GCOM1-210ENST00000488175 MYO18BQ8IUG5 2567 aa11.81□□□□□ -0.52
GCOM1-210ENST00000488175 Q9H8V8 135 aa11.81□□□□□ -0.52
GCOM1-210ENST00000488175 IGHV3OR16-12A0A075B7B8 117 aa11.8□□□□□ -0.52
GCOM1-210ENST00000488175 H3BT86 120 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms