RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 TMEM136Q6ZRR5 245 aa11.49□□□□□ -0.57
SHROOM1-205ENST00000488072 IMMP2LQ96T52 175 aa11.49□□□□□ -0.57
SHROOM1-205ENST00000488072 TRAV9-2A0A087WT02 112 aa11.48□□□□□ -0.57
SHROOM1-205ENST00000488072 TNFRSF6BO95407 300 aa11.48□□□□□ -0.57
SHROOM1-205ENST00000488072 RBX1P62877 108 aa11.48□□□□□ -0.57
SHROOM1-205ENST00000488072 RHEBQ15382 184 aa11.48□□□□□ -0.57
SHROOM1-205ENST00000488072 CLPSL2Q6UWE3 100 aa11.48□□□□□ -0.57
SHROOM1-205ENST00000488072 FRZBQ92765 325 aa11.48□□□□□ -0.57
SHROOM1-205ENST00000488072 TMEM243Q9BU79 118 aa11.48□□□□□ -0.57
SHROOM1-205ENST00000488072 CHCHD7Q9BUK0 85 aa11.48□□□□□ -0.57
SHROOM1-205ENST00000488072 DYNC1H1Q14204 4646 aaKnown RBP11.48□□□□□ -0.57
SHROOM1-205ENST00000488072 HECTD4Q9Y4D8 3996 aa11.47□□□□□ -0.57
SHROOM1-205ENST00000488072 IGLV4-60A0A075B6I1 120 aa11.47□□□□□ -0.57
SHROOM1-205ENST00000488072 A0A087WX48 190 aa11.47□□□□□ -0.57
SHROOM1-205ENST00000488072 I3L3M4 83 aa11.47□□□□□ -0.57
SHROOM1-205ENST00000488072 S100A8P05109 93 aa11.47□□□□□ -0.57
SHROOM1-205ENST00000488072 KIAA1644Q3SXP7 199 aa11.47□□□□□ -0.57
SHROOM1-205ENST00000488072 KCNIP4Q6PIL6 250 aa11.47□□□□□ -0.57
SHROOM1-205ENST00000488072 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.47□□□□□ -0.57
SHROOM1-205ENST00000488072 TGIF2-C20orf24A0A0A6YYL0 155 aa11.46□□□□□ -0.57
SHROOM1-205ENST00000488072 SUMO2P61956 95 aaKnown RBP11.46□□□□□ -0.57
SHROOM1-205ENST00000488072 UBE2WQ96B02 151 aa11.46□□□□□ -0.57
SHROOM1-205ENST00000488072 TMEM97Q5BJF2 176 aa11.45□□□□□ -0.58
SHROOM1-205ENST00000488072 ENHOQ6UWT2 76 aa11.45□□□□□ -0.58
SHROOM1-205ENST00000488072 LINC00336Q6ZUF6 198 aa11.45□□□□□ -0.58
SHROOM1-205ENST00000488072 SVBPQ8N300 66 aa11.45□□□□□ -0.58
SHROOM1-205ENST00000488072 C10orf126Q8N4M7 172 aa11.45□□□□□ -0.58
SHROOM1-205ENST00000488072 C20orf203Q8NBC4 194 aa11.45□□□□□ -0.58
SHROOM1-205ENST00000488072 PRELID3AQ96N28 172 aa11.45□□□□□ -0.58
SHROOM1-205ENST00000488072 SNAPINO95295 136 aa11.44□□□□□ -0.58
SHROOM1-205ENST00000488072 APCSP02743 223 aa11.44□□□□□ -0.58
SHROOM1-205ENST00000488072 ANGP03950 147 aaKnown RBP11.44□□□□□ -0.58
SHROOM1-205ENST00000488072 MAPKAPK5-AS1Q8N8E1 139 aa11.44□□□□□ -0.58
SHROOM1-205ENST00000488072 TRBV24-1A0A075B6N3 115 aa11.43□□□□□ -0.58
SHROOM1-205ENST00000488072 TRBV27A0A0K0K1C4 114 aa11.43□□□□□ -0.58
SHROOM1-205ENST00000488072 LOC389332A0A1B0GUA5 103 aa11.43□□□□□ -0.58
SHROOM1-205ENST00000488072 ESDP10768 282 aa11.43□□□□□ -0.58
SHROOM1-205ENST00000488072 S100PP25815 95 aa11.43□□□□□ -0.58
SHROOM1-205ENST00000488072 WFDC2Q14508 124 aa11.43□□□□□ -0.58
SHROOM1-205ENST00000488072 NDUFA5Q16718 116 aa11.43□□□□□ -0.58
SHROOM1-205ENST00000488072 ORMDL3Q8N138 153 aa11.43□□□□□ -0.58
SHROOM1-205ENST00000488072 VCYO14598 125 aa11.42□□□□□ -0.58
SHROOM1-205ENST00000488072 TCAPO15273 167 aa11.42□□□□□ -0.58
SHROOM1-205ENST00000488072 ELOBQ15370 118 aa11.42□□□□□ -0.58
SHROOM1-205ENST00000488072 LINC00269Q8N2A0 174 aa11.42□□□□□ -0.58
SHROOM1-205ENST00000488072 BIRC6Q9NR09 4857 aa11.41□□□□□ -0.58
SHROOM1-205ENST00000488072 CBLN2Q8IUK8 224 aa11.41□□□□□ -0.58
SHROOM1-205ENST00000488072 SMIM2Q9BVW6 85 aa11.41□□□□□ -0.58
SHROOM1-205ENST00000488072 DNAH5Q8TE73 4624 aa11.4□□□□□ -0.58
SHROOM1-205ENST00000488072 TRAV9-1A0A075B6T8 112 aa11.4□□□□□ -0.58
SHROOM1-205ENST00000488072 K7EP13 123 aa11.4□□□□□ -0.58
SHROOM1-205ENST00000488072 UBE2L6O14933 153 aa11.4□□□□□ -0.58
SHROOM1-205ENST00000488072 LECT2O14960 151 aa11.4□□□□□ -0.58
SHROOM1-205ENST00000488072 FGF6P10767 208 aa11.4□□□□□ -0.58
SHROOM1-205ENST00000488072 KRTAP10-2P60368 255 aa11.4□□□□□ -0.58
SHROOM1-205ENST00000488072 YPEL4Q96NS1 127 aa11.4□□□□□ -0.58
SHROOM1-205ENST00000488072 C20orf78Q9BR46 151 aa11.4□□□□□ -0.58
SHROOM1-205ENST00000488072 IGKV2D-24A0A075B6R9 120 aa11.39□□□□□ -0.59
SHROOM1-205ENST00000488072 A0A087WTM6 91 aa11.39□□□□□ -0.59
SHROOM1-205ENST00000488072 PPBPP02775 128 aa11.39□□□□□ -0.59
SHROOM1-205ENST00000488072 FCER1GP30273 86 aa11.39□□□□□ -0.59
SHROOM1-205ENST00000488072 RNASEKQ6P5S7 137 aaKnown RBP11.39□□□□□ -0.59
SHROOM1-205ENST00000488072 NFE4Q86UQ8 179 aa11.39□□□□□ -0.59
SHROOM1-205ENST00000488072 IGLV10-54A0A075B6I4 117 aa11.38□□□□□ -0.59
SHROOM1-205ENST00000488072 IGKV3OR2-268A0A0C4DH90 116 aa11.38□□□□□ -0.59
SHROOM1-205ENST00000488072 LRCOL1A6NCL2 159 aa11.38□□□□□ -0.59
SHROOM1-205ENST00000488072 PPP1R17O96001 155 aa11.38□□□□□ -0.59
SHROOM1-205ENST00000488072 BTF3P20290 206 aaKnown RBP11.38□□□□□ -0.59
SHROOM1-205ENST00000488072 LAGE3Q14657 143 aa11.38□□□□□ -0.59
SHROOM1-205ENST00000488072 TRAV8-3A0A0A6YYJ7 113 aa11.37□□□□□ -0.59
SHROOM1-205ENST00000488072 RPL39P62891 51 aaKnown RBP11.37□□□□□ -0.59
SHROOM1-205ENST00000488072 RNASE13Q5GAN3 156 aaKnown RBP11.37□□□□□ -0.59
SHROOM1-205ENST00000488072 SPATA12Q7Z6I5 190 aa11.37□□□□□ -0.59
SHROOM1-205ENST00000488072 BAALCQ8WXS3 180 aa11.37□□□□□ -0.59
SHROOM1-205ENST00000488072 GNB1LQ9BYB4 327 aa11.37□□□□□ -0.59
SHROOM1-205ENST00000488072 MRPL18Q9H0U6 180 aaKnown RBP11.37□□□□□ -0.59
SHROOM1-205ENST00000488072 PKHD1P08F94 4074 aa11.36□□□□□ -0.59
SHROOM1-205ENST00000488072 A0A1B0GUV1 79 aa11.36□□□□□ -0.59
SHROOM1-205ENST00000488072 PHOX2AO14813 284 aa11.36□□□□□ -0.59
SHROOM1-205ENST00000488072 PSCAO43653 123 aa11.36□□□□□ -0.59
SHROOM1-205ENST00000488072 RPL32P62910 135 aaKnown RBP11.36□□□□□ -0.59
SHROOM1-205ENST00000488072 REG3AQ06141 175 aa11.36□□□□□ -0.59
SHROOM1-205ENST00000488072 AMMECR1LQ6DCA0 310 aa11.36□□□□□ -0.59
SHROOM1-205ENST00000488072 KRTAP26-1Q6PEX3 210 aa11.36□□□□□ -0.59
SHROOM1-205ENST00000488072 PRR34Q9NV39 138 aa11.36□□□□□ -0.59
SHROOM1-205ENST00000488072 SCO1O75880 301 aa11.35□□□□□ -0.59
SHROOM1-205ENST00000488072 HLA-DQA1P01909 254 aa11.35□□□□□ -0.59
SHROOM1-205ENST00000488072 CRPP02741 224 aa11.35□□□□□ -0.59
SHROOM1-205ENST00000488072 FABP9Q0Z7S8 132 aa11.35□□□□□ -0.59
SHROOM1-205ENST00000488072 KIR2DL4Q99706 377 aa11.35□□□□□ -0.59
SHROOM1-205ENST00000488072 OPRPNQ99935 248 aaPredicted RBP11.35□□□□□ -0.59
SHROOM1-205ENST00000488072 LRP1BQ9NZR2 4599 aa11.34□□□□□ -0.59
SHROOM1-205ENST00000488072 IFI27P40305 119 aaPredicted RBP11.34□□□□□ -0.59
SHROOM1-205ENST00000488072 PKIAP61925 76 aa11.34□□□□□ -0.59
SHROOM1-205ENST00000488072 FAM104AQ969W3 186 aa11.34□□□□□ -0.59
SHROOM1-205ENST00000488072 ALKBH7Q9BT30 221 aaPredicted RBP11.34□□□□□ -0.59
SHROOM1-205ENST00000488072 MAP1LC3AQ9H492 121 aa11.34□□□□□ -0.59
SHROOM1-205ENST00000488072 PRSS47A8MTI9 375 aa11.33□□□□□ -0.6
SHROOM1-205ENST00000488072 UBE2D4Q9Y2X8 147 aa11.33□□□□□ -0.6
SHROOM1-205ENST00000488072 Q6ZUT4 128 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms