RNA–Protein interactions for RNA: ENST00000487984.1

SDC3-204, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 355 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-204ENST00000487984 FRZBQ92765 325 aa8.16□□□□□ -1.1
SDC3-204ENST00000487984 CNFNQ9BYD5 112 aa8.16□□□□□ -1.1
SDC3-204ENST00000487984 TRGC1P0CF51 173 aa8.15□□□□□ -1.1
SDC3-204ENST00000487984 INAFM2P0DMQ5 153 aa8.15□□□□□ -1.1
SDC3-204ENST00000487984 RPS10P46783 165 aaKnown RBP8.15□□□□□ -1.1
SDC3-204ENST00000487984 RAB4BP61018 213 aa8.15□□□□□ -1.1
SDC3-204ENST00000487984 TWIST1Q15672 202 aa8.15□□□□□ -1.1
SDC3-204ENST00000487984 TMEM70Q9BUB7 260 aa8.15□□□□□ -1.1
SDC3-204ENST00000487984 GNB1LQ9BYB4 327 aa8.15□□□□□ -1.1
SDC3-204ENST00000487984 LECT2O14960 151 aa8.14□□□□□ -1.11
SDC3-204ENST00000487984 HLA-DQA1P01909 254 aa8.14□□□□□ -1.11
SDC3-204ENST00000487984 CAMPP49913 170 aa8.14□□□□□ -1.11
SDC3-204ENST00000487984 NIT1Q86X76 327 aa8.14□□□□□ -1.11
SDC3-204ENST00000487984 FAM30AQ9NZY2 134 aa8.14□□□□□ -1.11
SDC3-204ENST00000487984 HERC1Q15751 4861 aa8.14□□□□□ -1.11
SDC3-204ENST00000487984 DNAH8Q96JB1 4490 aa8.13□□□□□ -1.11
SDC3-204ENST00000487984 TRBV10-1A0A0K0K1A3 114 aa8.13□□□□□ -1.11
SDC3-204ENST00000487984 A0A1B0GXF2 115 aa8.13□□□□□ -1.11
SDC3-204ENST00000487984 NTF3P20783 257 aa8.13□□□□□ -1.11
SDC3-204ENST00000487984 UBE2D3P61077 147 aa8.13□□□□□ -1.11
SDC3-204ENST00000487984 UBE2D2P62837 147 aa8.13□□□□□ -1.11
SDC3-204ENST00000487984 RPL36AP83881 106 aaKnown RBP8.13□□□□□ -1.11
SDC3-204ENST00000487984 OR10AG1Q8NH19 301 aa8.13□□□□□ -1.11
SDC3-204ENST00000487984 RPL36ALQ969Q0 106 aaKnown RBP8.13□□□□□ -1.11
SDC3-204ENST00000487984 DNAJC30Q96LL9 226 aa8.13□□□□□ -1.11
SDC3-204ENST00000487984 TRAPPC1Q9Y5R8 145 aa8.13□□□□□ -1.11
SDC3-204ENST00000487984 MYCBP2O75592 4640 aa8.12□□□□□ -1.11
SDC3-204ENST00000487984 TRBV7-3A0A075B6L6 115 aa8.12□□□□□ -1.11
SDC3-204ENST00000487984 SMIM17P0DL12 118 aa8.12□□□□□ -1.11
SDC3-204ENST00000487984 AP1S3Q96PC3 154 aa8.12□□□□□ -1.11
SDC3-204ENST00000487984 KLK12Q9UKR0 248 aa8.12□□□□□ -1.11
SDC3-204ENST00000487984 SRRM2Q9UQ35 2752 aaKnown RBP8.12□□□□□ -1.11
SDC3-204ENST00000487984 DMBT1Q9UGM3 2413 aaPredicted RBP8.11□□□□□ -1.11
SDC3-204ENST00000487984 MUC21A0A0G2JKD1 596 aa8.11□□□□□ -1.11
SDC3-204ENST00000487984 MUC21A0A140T8X8 626 aa8.11□□□□□ -1.11
SDC3-204ENST00000487984 C1orf196B1AJZ1 125 aa8.11□□□□□ -1.11
SDC3-204ENST00000487984 APCSP02743 223 aa8.11□□□□□ -1.11
SDC3-204ENST00000487984 SSTP61278 116 aa8.11□□□□□ -1.11
SDC3-204ENST00000487984 ZNF56Q15929 161 aa8.11□□□□□ -1.11
SDC3-204ENST00000487984 TMEM136Q6ZRR5 245 aa8.11□□□□□ -1.11
SDC3-204ENST00000487984 GATD1Q8NB37 220 aa8.11□□□□□ -1.11
SDC3-204ENST00000487984 BAALCQ8WXS3 180 aa8.11□□□□□ -1.11
SDC3-204ENST00000487984 RMI2Q96E14 147 aa8.11□□□□□ -1.11
SDC3-204ENST00000487984 CHCHD7Q9BUK0 85 aa8.11□□□□□ -1.11
SDC3-204ENST00000487984 TMEM191AQ9H0A3 160 aa8.11□□□□□ -1.11
SDC3-204ENST00000487984 COX11Q9Y6N1 276 aa8.11□□□□□ -1.11
SDC3-204ENST00000487984 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.1□□□□□ -1.11
SDC3-204ENST00000487984 IGKV2D-24A0A075B6R9 120 aa8.1□□□□□ -1.11
SDC3-204ENST00000487984 A0A087WX48 190 aa8.1□□□□□ -1.11
SDC3-204ENST00000487984 FAM229AH3BQW9 127 aa8.1□□□□□ -1.11
SDC3-204ENST00000487984 FABP9Q0Z7S8 132 aa8.1□□□□□ -1.11
SDC3-204ENST00000487984 NEXN-AS1Q8NBZ9 246 aa8.1□□□□□ -1.11
SDC3-204ENST00000487984 MRPL18Q9H0U6 180 aaKnown RBP8.1□□□□□ -1.11
SDC3-204ENST00000487984 FLG2Q5D862 2391 aaPredicted RBP8.1□□□□□ -1.11
SDC3-204ENST00000487984 Q6ZSA8 131 aa8.09□□□□□ -1.11
SDC3-204ENST00000487984 UBE2WQ96B02 151 aa8.09□□□□□ -1.11
SDC3-204ENST00000487984 DPH3P1Q9H4G8 78 aa8.09□□□□□ -1.11
SDC3-204ENST00000487984 TRBV6-8A0A0A6YYG3 113 aa8.08□□□□□ -1.12
SDC3-204ENST00000487984 TRGC2P03986 189 aa8.08□□□□□ -1.12
SDC3-204ENST00000487984 RAB5BP61020 215 aa8.08□□□□□ -1.12
SDC3-204ENST00000487984 FAM104BQ5XKR9 115 aa8.08□□□□□ -1.12
SDC3-204ENST00000487984 TMEM262E9PQX1 116 aa8.07□□□□□ -1.12
SDC3-204ENST00000487984 PPBPP02775 128 aa8.07□□□□□ -1.12
SDC3-204ENST00000487984 LINC01620Q4KN68 170 aa8.07□□□□□ -1.12
SDC3-204ENST00000487984 Q8N976 141 aa8.07□□□□□ -1.12
SDC3-204ENST00000487984 KIF25-AS1Q9Y6Z4 181 aa8.07□□□□□ -1.12
SDC3-204ENST00000487984 F5H697 171 aa8.06□□□□□ -1.12
SDC3-204ENST00000487984 PPP1R17O96001 155 aa8.06□□□□□ -1.12
SDC3-204ENST00000487984 Q0VG73 95 aa8.06□□□□□ -1.12
SDC3-204ENST00000487984 MPV17L2Q567V2 206 aa8.06□□□□□ -1.12
SDC3-204ENST00000487984 ENHOQ6UWT2 76 aa8.06□□□□□ -1.12
SDC3-204ENST00000487984 MRAP2Q96G30 205 aa8.06□□□□□ -1.12
SDC3-204ENST00000487984 MGPP08493 103 aa8.05□□□□□ -1.12
SDC3-204ENST00000487984 CKS2P33552 79 aa8.05□□□□□ -1.12
SDC3-204ENST00000487984 AMN1Q8IY45 258 aa8.05□□□□□ -1.12
SDC3-204ENST00000487984 ORMDL3Q8N138 153 aa8.05□□□□□ -1.12
SDC3-204ENST00000487984 CHCHD5Q9BSY4 110 aa8.05□□□□□ -1.12
SDC3-204ENST00000487984 LAMTOR2Q9Y2Q5 125 aa8.05□□□□□ -1.12
SDC3-204ENST00000487984 H7C1H1 209 aa8.04□□□□□ -1.12
SDC3-204ENST00000487984 CRPP02741 224 aa8.04□□□□□ -1.12
SDC3-204ENST00000487984 ANGP03950 147 aaKnown RBP8.04□□□□□ -1.12
SDC3-204ENST00000487984 RAB4AP20338 218 aa8.04□□□□□ -1.12
SDC3-204ENST00000487984 NTM-AS1Q6ZSK4 140 aa8.04□□□□□ -1.12
SDC3-204ENST00000487984 C1orf43Q9BWL3 253 aa8.04□□□□□ -1.12
SDC3-204ENST00000487984 PKIAP61925 76 aa8.03□□□□□ -1.12
SDC3-204ENST00000487984 MRPL51Q4U2R6 128 aaKnown RBP8.03□□□□□ -1.12
SDC3-204ENST00000487984 SCXQ7RTU7 201 aa8.03□□□□□ -1.12
SDC3-204ENST00000487984 LINC00528Q8N1L1 170 aa8.03□□□□□ -1.12
SDC3-204ENST00000487984 M0QY20 66 aa8.02□□□□□ -1.13
SDC3-204ENST00000487984 PHOX2AO14813 284 aa8.02□□□□□ -1.13
SDC3-204ENST00000487984 S100A6P06703 90 aa8.02□□□□□ -1.13
SDC3-204ENST00000487984 KIAA1644Q3SXP7 199 aa8.02□□□□□ -1.13
SDC3-204ENST00000487984 TMEM97Q5BJF2 176 aa8.02□□□□□ -1.13
SDC3-204ENST00000487984 RNF185Q96GF1 192 aa8.02□□□□□ -1.13
SDC3-204ENST00000487984 PRELID3AQ96N28 172 aa8.02□□□□□ -1.13
SDC3-204ENST00000487984 ALKBH7Q9BT30 221 aaPredicted RBP8.02□□□□□ -1.13
SDC3-204ENST00000487984 D6R8Y8 96 aa8.01□□□□□ -1.13
SDC3-204ENST00000487984 PLA2G1BP04054 148 aaKnown RBP8.01□□□□□ -1.13
SDC3-204ENST00000487984 RBX1P62877 108 aa8.01□□□□□ -1.13
SDC3-204ENST00000487984 GAGE6Q13070 117 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms