RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 SULT1A3P0DMM9 295 aa2.58□□□□□ -2
BRCA1-217ENST00000487825 SULT1A4P0DMN0 295 aa2.58□□□□□ -2
BRCA1-217ENST00000487825 CRISP2P16562 243 aa2.58□□□□□ -2
BRCA1-217ENST00000487825 MYL9P24844 172 aa2.58□□□□□ -2
BRCA1-217ENST00000487825 S100PP25815 95 aa2.58□□□□□ -2
BRCA1-217ENST00000487825 RNASE4P34096 147 aaKnown RBP2.58□□□□□ -2
BRCA1-217ENST00000487825 ZNF138P52744 262 aa2.58□□□□□ -2
BRCA1-217ENST00000487825 COX6A2Q02221 97 aa2.58□□□□□ -2
BRCA1-217ENST00000487825 SMAGPQ0VAQ4 97 aa2.58□□□□□ -2
BRCA1-217ENST00000487825 ASB16-AS1Q495Z4 193 aa2.58□□□□□ -2
BRCA1-217ENST00000487825 PRR9Q5T870 116 aa2.58□□□□□ -2
BRCA1-217ENST00000487825 Q6ZN92 141 aa2.58□□□□□ -2
BRCA1-217ENST00000487825 CYB561D1Q8N8Q1 229 aa2.58□□□□□ -2
BRCA1-217ENST00000487825 MCFD2Q8NI22 146 aa2.58□□□□□ -2
BRCA1-217ENST00000487825 PGLYRP4Q96LB8 373 aa2.58□□□□□ -2
BRCA1-217ENST00000487825 C20orf85Q9H1P6 137 aa2.58□□□□□ -2
BRCA1-217ENST00000487825 WFDC1Q9HC57 220 aa2.58□□□□□ -2
BRCA1-217ENST00000487825 A0A087WX48 190 aa2.57□□□□□ -2
BRCA1-217ENST00000487825 IGHV3OR16-9A0A0B4J2B5 98 aa2.57□□□□□ -2
BRCA1-217ENST00000487825 IGKV2-24A0A0C4DH68 120 aa2.57□□□□□ -2
BRCA1-217ENST00000487825 PGPA6NDG6 321 aa2.57□□□□□ -2
BRCA1-217ENST00000487825 CEBPZOSA8MTT3 80 aa2.57□□□□□ -2
BRCA1-217ENST00000487825 SLC17A3O00476 420 aa2.57□□□□□ -2
BRCA1-217ENST00000487825 PDCD5O14737 125 aa2.57□□□□□ -2
BRCA1-217ENST00000487825 CRPP02741 224 aa2.57□□□□□ -2
BRCA1-217ENST00000487825 NMBP08949 121 aa2.57□□□□□ -2
BRCA1-217ENST00000487825 PMVKQ15126 192 aa2.57□□□□□ -2
BRCA1-217ENST00000487825 TMEM78Q5T7P6 136 aa2.57□□□□□ -2
BRCA1-217ENST00000487825 LPCAT3Q6P1A2 487 aa2.57□□□□□ -2
BRCA1-217ENST00000487825 KRTAP26-1Q6PEX3 210 aa2.57□□□□□ -2
BRCA1-217ENST00000487825 ZFAND2AQ8N6M9 145 aa2.57□□□□□ -2
BRCA1-217ENST00000487825 FER1L6-AS1Q8NA97 138 aa2.57□□□□□ -2
BRCA1-217ENST00000487825 OR1S1Q8NH92 325 aa2.57□□□□□ -2
BRCA1-217ENST00000487825 CYGBQ8WWM9 190 aa2.57□□□□□ -2
BRCA1-217ENST00000487825 DIRC1Q969H9 104 aa2.57□□□□□ -2
BRCA1-217ENST00000487825 TP53RKQ96S44 253 aa2.57□□□□□ -2
BRCA1-217ENST00000487825 HIST1H4GQ99525 98 aa2.57□□□□□ -2
BRCA1-217ENST00000487825 MND1Q9BWT6 205 aa2.57□□□□□ -2
BRCA1-217ENST00000487825 CYTL1Q9NRR1 136 aa2.57□□□□□ -2
BRCA1-217ENST00000487825 LSM2Q9Y333 95 aaKnown RBP2.57□□□□□ -2
BRCA1-217ENST00000487825 U3KQ87 197 aa2.57□□□□□ -2
BRCA1-217ENST00000487825 FLGP20930 4061 aaPredicted RBP2.56□□□□□ -2
BRCA1-217ENST00000487825 IGLV10-54A0A075B6I4 117 aa2.56□□□□□ -2
BRCA1-217ENST00000487825 TRAV1-2A0A0B4J238 106 aa2.56□□□□□ -2
BRCA1-217ENST00000487825 A0A1B0GV90 55 aa2.56□□□□□ -2
BRCA1-217ENST00000487825 MEIS3P1A6NDR6 274 aa2.56□□□□□ -2
BRCA1-217ENST00000487825 M0R2P5 195 aa2.56□□□□□ -2
BRCA1-217ENST00000487825 PDE6DO43924 150 aa2.56□□□□□ -2
BRCA1-217ENST00000487825 IFNA7P01567 189 aa2.56□□□□□ -2
BRCA1-217ENST00000487825 PMP2P02689 132 aa2.56□□□□□ -2
BRCA1-217ENST00000487825 GPX1P07203 203 aa2.56□□□□□ -2
BRCA1-217ENST00000487825 ESDP10768 282 aa2.56□□□□□ -2
BRCA1-217ENST00000487825 AKR1C3P42330 323 aa2.56□□□□□ -2
BRCA1-217ENST00000487825 UBE2D1P51668 147 aa2.56□□□□□ -2
BRCA1-217ENST00000487825 HBG1P69891 147 aa2.56□□□□□ -2
BRCA1-217ENST00000487825 HBG2P69892 147 aa2.56□□□□□ -2
BRCA1-217ENST00000487825 FABP5Q01469 135 aa2.56□□□□□ -2
BRCA1-217ENST00000487825 SURF2Q15527 256 aaPredicted RBP2.56□□□□□ -2
BRCA1-217ENST00000487825 MIAQ16674 131 aa2.56□□□□□ -2
BRCA1-217ENST00000487825 TMEM128Q5BJH2 165 aa2.56□□□□□ -2
BRCA1-217ENST00000487825 UFSP1Q6NVU6 142 aa2.56□□□□□ -2
BRCA1-217ENST00000487825 CHCHD10Q8WYQ3 142 aaPredicted RBP2.56□□□□□ -2
BRCA1-217ENST00000487825 BORCS7Q96B45 105 aa2.56□□□□□ -2
BRCA1-217ENST00000487825 LINC00477Q96M19 166 aa2.56□□□□□ -2
BRCA1-217ENST00000487825 MGLLQ99685 303 aa2.56□□□□□ -2
BRCA1-217ENST00000487825 ANAPC10Q9UM13 185 aa2.56□□□□□ -2
BRCA1-217ENST00000487825 HIGD1AQ9Y241 93 aa2.56□□□□□ -2
BRCA1-217ENST00000487825 PXMP4Q9Y6I8 212 aa2.56□□□□□ -2
BRCA1-217ENST00000487825 A0A096LNI7 61 aa2.55□□□□□ -2
BRCA1-217ENST00000487825 PFDN1O60925 122 aa2.55□□□□□ -2
BRCA1-217ENST00000487825 IGLC2P0DOY2 106 aa2.55□□□□□ -2
BRCA1-217ENST00000487825 MGST1P10620 155 aaKnown RBP2.55□□□□□ -2
BRCA1-217ENST00000487825 RAB3BP20337 219 aa2.55□□□□□ -2
BRCA1-217ENST00000487825 RCVRNP35243 200 aa2.55□□□□□ -2
BRCA1-217ENST00000487825 CTRLP40313 264 aa2.55□□□□□ -2
BRCA1-217ENST00000487825 INPP1P49441 399 aa2.55□□□□□ -2
BRCA1-217ENST00000487825 H2BFSP57053 126 aa2.55□□□□□ -2
BRCA1-217ENST00000487825 TAS2R46P59540 309 aa2.55□□□□□ -2
BRCA1-217ENST00000487825 ERCC8Q13216 396 aa2.55□□□□□ -2
BRCA1-217ENST00000487825 BATFQ16520 125 aa2.55□□□□□ -2
BRCA1-217ENST00000487825 KRTAP20-1Q3LI63 56 aa2.55□□□□□ -2
BRCA1-217ENST00000487825 KRTAP6-3Q3LI67 103 aa2.55□□□□□ -2
BRCA1-217ENST00000487825 CFAP126Q5VTH2 177 aa2.55□□□□□ -2
BRCA1-217ENST00000487825 FMC1Q96HJ9 113 aa2.55□□□□□ -2
BRCA1-217ENST00000487825 DIRAS2Q96HU8 199 aa2.55□□□□□ -2
BRCA1-217ENST00000487825 RETNLBQ9BQ08 111 aa2.55□□□□□ -2
BRCA1-217ENST00000487825 RTBDNQ9BSG5 229 aaPredicted RBP2.55□□□□□ -2
BRCA1-217ENST00000487825 MARVELD1Q9BSK0 173 aa2.55□□□□□ -2
BRCA1-217ENST00000487825 AGPAT4-IT1Q9H0P7 198 aa2.55□□□□□ -2
BRCA1-217ENST00000487825 SPANXCQ9NY87 97 aa2.55□□□□□ -2
BRCA1-217ENST00000487825 CACFD1Q9UGQ2 172 aa2.55□□□□□ -2
BRCA1-217ENST00000487825 C3orf85A0A1B0GTC6 90 aa2.54□□□□□ -2
BRCA1-217ENST00000487825 A0A1B0GV50 99 aa2.54□□□□□ -2
BRCA1-217ENST00000487825 A0A1B0GXF2 115 aa2.54□□□□□ -2
BRCA1-217ENST00000487825 MAP1LC3B2A6NCE7 125 aa2.54□□□□□ -2
BRCA1-217ENST00000487825 GYG2O15488 501 aa2.54□□□□□ -2
BRCA1-217ENST00000487825 DLEU1O43261 78 aa2.54□□□□□ -2
BRCA1-217ENST00000487825 HYPMO75409 117 aa2.54□□□□□ -2
BRCA1-217ENST00000487825 LINC00869P0C866 280 aa2.54□□□□□ -2
BRCA1-217ENST00000487825 DDTP30046 118 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms