RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 CHAC1Q9BUX1 264 aa14.65□□□□□ -0.06
HPS3-206ENST00000486530 JMJD1CQ15652 2540 aa14.64□□□□□ -0.07
HPS3-206ENST00000486530 CITED1Q99966 193 aa14.64□□□□□ -0.07
HPS3-206ENST00000486530 PYGO1Q9Y3Y4 419 aa14.64□□□□□ -0.07
HPS3-206ENST00000486530 TRAV4A0A0B4J268 109 aa14.63□□□□□ -0.07
HPS3-206ENST00000486530 TAX1BP3O14907 124 aa14.63□□□□□ -0.07
HPS3-206ENST00000486530 Q6ZTI0 123 aa14.63□□□□□ -0.07
HPS3-206ENST00000486530 MAPKAPK5-AS1Q8N8E1 139 aa14.63□□□□□ -0.07
HPS3-206ENST00000486530 Q9UF83 564 aa14.63□□□□□ -0.07
HPS3-206ENST00000486530 HERVK_113P61574 105 aa14.63□□□□□ -0.07
HPS3-206ENST00000486530 IGLV4-3A0A075B6K6 122 aa14.62□□□□□ -0.07
HPS3-206ENST00000486530 A6NDN8 102 aa14.62□□□□□ -0.07
HPS3-206ENST00000486530 C9orf66Q5T8R8 295 aa14.62□□□□□ -0.07
HPS3-206ENST00000486530 Q6ZVH6 145 aa14.62□□□□□ -0.07
HPS3-206ENST00000486530 PRADC1Q9BSG0 188 aa14.62□□□□□ -0.07
HPS3-206ENST00000486530 NOP10Q9NPE3 64 aaKnown RBP14.62□□□□□ -0.07
HPS3-206ENST00000486530 TEP1Q99973 2627 aaKnown RBP14.62□□□□□ -0.07
HPS3-206ENST00000486530 PLAC8L1A1L4L8 177 aa14.61□□□□□ -0.07
HPS3-206ENST00000486530 NPSP0C0P6 89 aa14.61□□□□□ -0.07
HPS3-206ENST00000486530 RRN3P1Q2M238 152 aa14.61□□□□□ -0.07
HPS3-206ENST00000486530 ZNF479Q96JC4 524 aa14.61□□□□□ -0.07
HPS3-206ENST00000486530 EMP1P54849 157 aa14.61□□□□□ -0.07
HPS3-206ENST00000486530 NFE4Q86UQ8 179 aa14.61□□□□□ -0.07
HPS3-206ENST00000486530 OPRPNQ99935 248 aaPredicted RBP14.61□□□□□ -0.07
HPS3-206ENST00000486530 TRBV10-1A0A0K0K1A3 114 aa14.6□□□□□ -0.07
HPS3-206ENST00000486530 MYMXA0A1B0GTQ4 84 aa14.6□□□□□ -0.07
HPS3-206ENST00000486530 CRYBA4P53673 196 aa14.6□□□□□ -0.07
HPS3-206ENST00000486530 COTL1Q14019 142 aa14.6□□□□□ -0.07
HPS3-206ENST00000486530 CHCHD7Q9BUK0 85 aa14.6□□□□□ -0.07
HPS3-206ENST00000486530 K7EQD1 137 aa14.59□□□□□ -0.07
HPS3-206ENST00000486530 SPATA3Q8NHX4 192 aa14.59□□□□□ -0.07
HPS3-206ENST00000486530 VCX2Q9H322 139 aa14.59□□□□□ -0.07
HPS3-206ENST00000486530 MAST4O15021 2626 aa14.59□□□□□ -0.07
HPS3-206ENST00000486530 ZNRF2Q8NHG8 242 aa14.59□□□□□ -0.07
HPS3-206ENST00000486530 OVOL2Q9BRP0 275 aa14.59□□□□□ -0.07
HPS3-206ENST00000486530 SPANXA1Q9NS26 97 aa14.58□□□□□ -0.08
HPS3-206ENST00000486530 TRBV7-3A0A075B6L6 115 aa14.57□□□□□ -0.08
HPS3-206ENST00000486530 TAL2Q16559 108 aa14.57□□□□□ -0.08
HPS3-206ENST00000486530 TMEM170BQ5T4T1 132 aa14.57□□□□□ -0.08
HPS3-206ENST00000486530 PHLDA1Q8WV24 401 aaPredicted RBP14.57□□□□□ -0.08
HPS3-206ENST00000486530 IGHV3-38A0A0C4DH36 116 aa14.57□□□□□ -0.08
HPS3-206ENST00000486530 CIDEAO60543 219 aa14.57□□□□□ -0.08
HPS3-206ENST00000486530 RPL36AP83881 106 aaKnown RBP14.57□□□□□ -0.08
HPS3-206ENST00000486530 RPL36ALQ969Q0 106 aaKnown RBP14.57□□□□□ -0.08
HPS3-206ENST00000486530 AMELXQ99217 191 aa14.57□□□□□ -0.08
HPS3-206ENST00000486530 GCSHP23434 173 aa14.55□□□□□ -0.08
HPS3-206ENST00000486530 UBE2D4Q9Y2X8 147 aa14.55□□□□□ -0.08
HPS3-206ENST00000486530 TENM1Q9UKZ4 2725 aa14.55□□□□□ -0.08
HPS3-206ENST00000486530 H3BRM9 83 aa14.55□□□□□ -0.08
HPS3-206ENST00000486530 FAM104AQ969W3 186 aa14.55□□□□□ -0.08
HPS3-206ENST00000486530 TRGV2A0A075B6R0 118 aa14.54□□□□□ -0.08
HPS3-206ENST00000486530 ZNF815PA8K554 130 aa14.54□□□□□ -0.08
HPS3-206ENST00000486530 CEND1Q8N111 149 aa14.54□□□□□ -0.08
HPS3-206ENST00000486530 TM2D2Q9BX73 214 aa14.54□□□□□ -0.08
HPS3-206ENST00000486530 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.53□□□□□ -0.08
HPS3-206ENST00000486530 GAGE12BA1L429 117 aa14.53□□□□□ -0.08
HPS3-206ENST00000486530 IGKV2-29A2NJV5 120 aaPredicted RBP14.53□□□□□ -0.08
HPS3-206ENST00000486530 GAGE7O76087 117 aa14.53□□□□□ -0.08
HPS3-206ENST00000486530 GAGE12FP0CL80 117 aa14.53□□□□□ -0.08
HPS3-206ENST00000486530 GAGE12GP0CL81 117 aa14.53□□□□□ -0.08
HPS3-206ENST00000486530 GAGE12IP0CL82 117 aa14.53□□□□□ -0.08
HPS3-206ENST00000486530 SLC25A29Q8N8R3 303 aa14.53□□□□□ -0.08
HPS3-206ENST00000486530 DAZ4Q86SG3 579 aaKnown RBP14.52□□□□□ -0.08
HPS3-206ENST00000486530 DAZ3Q9NR90 486 aaKnown RBP14.52□□□□□ -0.08
HPS3-206ENST00000486530 NOTCH3Q9UM47 2321 aa14.52□□□□□ -0.08
HPS3-206ENST00000486530 FXYD2P54710 66 aa14.52□□□□□ -0.09
HPS3-206ENST00000486530 KRTAP24-1Q3LI83 254 aa14.52□□□□□ -0.09
HPS3-206ENST00000486530 CEMP1Q6PRD7 247 aaPredicted RBP14.52□□□□□ -0.09
HPS3-206ENST00000486530 A0A0J9YXV3 536 aa14.51□□□□□ -0.09
HPS3-206ENST00000486530 ZNF22P17026 224 aaPredicted RBP14.51□□□□□ -0.09
HPS3-206ENST00000486530 VAMP3Q15836 100 aa14.51□□□□□ -0.09
HPS3-206ENST00000486530 PRIMA1Q86XR5 153 aa14.51□□□□□ -0.09
HPS3-206ENST00000486530 TMEM223A0PJW6 202 aa14.5□□□□□ -0.09
HPS3-206ENST00000486530 UBE2D3P61077 147 aa14.5□□□□□ -0.09
HPS3-206ENST00000486530 UBE2D2P62837 147 aa14.5□□□□□ -0.09
HPS3-206ENST00000486530 MRPS36P82909 103 aaKnown RBP14.5□□□□□ -0.09
HPS3-206ENST00000486530 UBE2V1Q13404 147 aa14.5□□□□□ -0.09
HPS3-206ENST00000486530 HIST1H4GQ99525 98 aa14.5□□□□□ -0.09
HPS3-206ENST00000486530 TIMM21Q9BVV7 248 aa14.5□□□□□ -0.09
HPS3-206ENST00000486530 TRBV6-4A0A1B0GX49 114 aa14.5□□□□□ -0.09
HPS3-206ENST00000486530 PTTG1IPP53801 180 aa14.5□□□□□ -0.09
HPS3-206ENST00000486530 ATRQ13535 2644 aa14.49□□□□□ -0.09
HPS3-206ENST00000486530 SCGB1D4Q6XE38 83 aa14.49□□□□□ -0.09
HPS3-206ENST00000486530 C9orf118A6NHY6 69 aa14.48□□□□□ -0.09
HPS3-206ENST00000486530 WFDC9Q8NEX5 89 aa14.48□□□□□ -0.09
HPS3-206ENST00000486530 VWFP04275 2813 aa14.48□□□□□ -0.09
HPS3-206ENST00000486530 GAGE12JA6NER3 117 aa14.48□□□□□ -0.09
HPS3-206ENST00000486530 LEPROTO15243 131 aa14.48□□□□□ -0.09
HPS3-206ENST00000486530 SMIM13P0DJ93 91 aa14.48□□□□□ -0.09
HPS3-206ENST00000486530 GAGE4Q13068 117 aa14.48□□□□□ -0.09
HPS3-206ENST00000486530 GAGE5Q13069 117 aa14.48□□□□□ -0.09
HPS3-206ENST00000486530 GAGE13Q4V321 117 aa14.48□□□□□ -0.09
HPS3-206ENST00000486530 Q6ZUT4 128 aa14.48□□□□□ -0.09
HPS3-206ENST00000486530 J3QQQ9 107 aa14.47□□□□□ -0.09
HPS3-206ENST00000486530 K7EP13 123 aa14.47□□□□□ -0.09
HPS3-206ENST00000486530 LGALS3P17931 250 aaKnown RBP14.47□□□□□ -0.09
HPS3-206ENST00000486530 TSPEAR-AS2P59090 65 aa14.47□□□□□ -0.09
HPS3-206ENST00000486530 TRGV4A0A0C4DH28 118 aa14.46□□□□□ -0.09
HPS3-206ENST00000486530 SMIM9A6NGZ8 99 aa14.46□□□□□ -0.09
HPS3-206ENST00000486530 RNASE13Q5GAN3 156 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms