RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 C20orf78Q9BR46 151 aa4.9□□□□□ -1.63
UBR4-214ENST00000486515 EDA2RQ9HAV5 297 aa4.9□□□□□ -1.63
UBR4-214ENST00000486515 NXT2Q9NPJ8 142 aaKnown RBP4.9□□□□□ -1.63
UBR4-214ENST00000486515 KIF25-AS1Q9Y6Z4 181 aa4.9□□□□□ -1.63
UBR4-214ENST00000486515 LOC389332A0A1B0GUA5 103 aa4.89□□□□□ -1.63
UBR4-214ENST00000486515 SDHAF1A6NFY7 115 aa4.89□□□□□ -1.63
UBR4-214ENST00000486515 SMKR1H3BMG3 65 aa4.89□□□□□ -1.63
UBR4-214ENST00000486515 UBE2L6O14933 153 aa4.89□□□□□ -1.63
UBR4-214ENST00000486515 HOXA5P20719 270 aa4.89□□□□□ -1.63
UBR4-214ENST00000486515 CCL18P55774 89 aa4.89□□□□□ -1.63
UBR4-214ENST00000486515 PKIAP61925 76 aa4.89□□□□□ -1.63
UBR4-214ENST00000486515 RBX1P62877 108 aa4.89□□□□□ -1.63
UBR4-214ENST00000486515 UFSP1Q6NVU6 142 aa4.89□□□□□ -1.63
UBR4-214ENST00000486515 NEXN-AS1Q8NBZ9 246 aa4.89□□□□□ -1.63
UBR4-214ENST00000486515 YPEL4Q96NS1 127 aa4.89□□□□□ -1.63
UBR4-214ENST00000486515 HECTD4Q9Y4D8 3996 aa4.89□□□□□ -1.63
UBR4-214ENST00000486515 DNAH7Q8WXX0 4024 aa4.88□□□□□ -1.63
UBR4-214ENST00000486515 A0A096LPF7 62 aa4.88□□□□□ -1.63
UBR4-214ENST00000486515 TRAV8-6A0A0B4J262 113 aa4.88□□□□□ -1.63
UBR4-214ENST00000486515 TRBV6-5A0A0K0K1A5 114 aa4.88□□□□□ -1.63
UBR4-214ENST00000486515 TMEM238C9JI98 176 aa4.88□□□□□ -1.63
UBR4-214ENST00000486515 I3L3M4 83 aa4.88□□□□□ -1.63
UBR4-214ENST00000486515 DLEU1O43261 78 aa4.88□□□□□ -1.63
UBR4-214ENST00000486515 NPYP01303 97 aa4.88□□□□□ -1.63
UBR4-214ENST00000486515 LINC00315P59091 139 aa4.88□□□□□ -1.63
UBR4-214ENST00000486515 UBE2DNLQ8IWF7 75 aa4.88□□□□□ -1.63
UBR4-214ENST00000486515 RPL39LQ96EH5 51 aaKnown RBP4.88□□□□□ -1.63
UBR4-214ENST00000486515 ALKBH7Q9BT30 221 aaPredicted RBP4.88□□□□□ -1.63
UBR4-214ENST00000486515 TRBV25-1A0A075B6N4 114 aa4.87□□□□□ -1.63
UBR4-214ENST00000486515 IGHV1-24A0A0C4DH33 117 aa4.87□□□□□ -1.63
UBR4-214ENST00000486515 LOC100131303A0A0U1RQF7 123 aa4.87□□□□□ -1.63
UBR4-214ENST00000486515 LINC01549A6NIU2 74 aa4.87□□□□□ -1.63
UBR4-214ENST00000486515 K7EMI3 77 aa4.87□□□□□ -1.63
UBR4-214ENST00000486515 K7EP13 123 aa4.87□□□□□ -1.63
UBR4-214ENST00000486515 P0DMU3 169 aa4.87□□□□□ -1.63
UBR4-214ENST00000486515 FAM231AP0DMU4 169 aa4.87□□□□□ -1.63
UBR4-214ENST00000486515 FAM231CP0DMU5 169 aa4.87□□□□□ -1.63
UBR4-214ENST00000486515 AMTP48728 403 aa4.87□□□□□ -1.63
UBR4-214ENST00000486515 ORMDL2Q53FV1 153 aa4.87□□□□□ -1.63
UBR4-214ENST00000486515 ZFAND6Q6FIF0 208 aa4.87□□□□□ -1.63
UBR4-214ENST00000486515 RNASEKQ6P5S7 137 aaKnown RBP4.87□□□□□ -1.63
UBR4-214ENST00000486515 Q6ZSN1 163 aa4.87□□□□□ -1.63
UBR4-214ENST00000486515 TMEM70Q9BUB7 260 aa4.87□□□□□ -1.63
UBR4-214ENST00000486515 SMIM2Q9BVW6 85 aa4.87□□□□□ -1.63
UBR4-214ENST00000486515 GTSF1LQ9H1H1 148 aa4.87□□□□□ -1.63
UBR4-214ENST00000486515 IGHV3-38A0A0C4DH36 116 aa4.86□□□□□ -1.63
UBR4-214ENST00000486515 TRBV27A0A0K0K1C4 114 aa4.86□□□□□ -1.63
UBR4-214ENST00000486515 TMEM262E9PQX1 116 aa4.86□□□□□ -1.63
UBR4-214ENST00000486515 TSTD3H0UI37 97 aa4.86□□□□□ -1.63
UBR4-214ENST00000486515 HSBP1O75506 76 aa4.86□□□□□ -1.63
UBR4-214ENST00000486515 DDTP30046 118 aa4.86□□□□□ -1.63
UBR4-214ENST00000486515 UBE2D3P61077 147 aa4.86□□□□□ -1.63
UBR4-214ENST00000486515 UBE2D2P62837 147 aa4.86□□□□□ -1.63
UBR4-214ENST00000486515 RPL32P62910 135 aaKnown RBP4.86□□□□□ -1.63
UBR4-214ENST00000486515 AMMECR1LQ6DCA0 310 aa4.86□□□□□ -1.63
UBR4-214ENST00000486515 DGAT2L7PQ6IED9 249 aa4.86□□□□□ -1.63
UBR4-214ENST00000486515 Q8N8P6 123 aa4.86□□□□□ -1.63
UBR4-214ENST00000486515 TMEM101Q96IK0 257 aa4.86□□□□□ -1.63
UBR4-214ENST00000486515 VSIG2Q96IQ7 327 aa4.86□□□□□ -1.63
UBR4-214ENST00000486515 CHCHD5Q9BSY4 110 aa4.86□□□□□ -1.63
UBR4-214ENST00000486515 AP5S1Q9NUS5 200 aa4.86□□□□□ -1.63
UBR4-214ENST00000486515 PGPEP1Q9NXJ5 209 aa4.86□□□□□ -1.63
UBR4-214ENST00000486515 A0A087WX48 190 aa4.85□□□□□ -1.63
UBR4-214ENST00000486515 IFI27P40305 119 aaPredicted RBP4.85□□□□□ -1.63
UBR4-214ENST00000486515 Q0VG73 95 aa4.85□□□□□ -1.63
UBR4-214ENST00000486515 LAGE3Q14657 143 aa4.85□□□□□ -1.63
UBR4-214ENST00000486515 NRACQ8N912 160 aa4.85□□□□□ -1.63
UBR4-214ENST00000486515 CHCHD1Q96BP2 118 aaKnown RBP4.85□□□□□ -1.63
UBR4-214ENST00000486515 TMEM243Q9BU79 118 aa4.85□□□□□ -1.63
UBR4-214ENST00000486515 TRAV9-2A0A087WT02 112 aa4.84□□□□□ -1.63
UBR4-214ENST00000486515 TRBV6-8A0A0A6YYG3 113 aa4.84□□□□□ -1.63
UBR4-214ENST00000486515 S100A2P29034 98 aa4.84□□□□□ -1.63
UBR4-214ENST00000486515 POLR2KP53803 58 aaKnown RBP4.84□□□□□ -1.63
UBR4-214ENST00000486515 NDUFA6P56556 154 aa4.84□□□□□ -1.63
UBR4-214ENST00000486515 IQCJQ1A5X6 159 aa4.84□□□□□ -1.63
UBR4-214ENST00000486515 LELP1Q5T871 98 aa4.84□□□□□ -1.63
UBR4-214ENST00000486515 LYPD5Q6UWN5 251 aa4.84□□□□□ -1.63
UBR4-214ENST00000486515 Q6ZN92 141 aa4.84□□□□□ -1.63
UBR4-214ENST00000486515 NIT1Q86X76 327 aa4.84□□□□□ -1.63
UBR4-214ENST00000486515 C18orf32Q8TCD1 76 aa4.84□□□□□ -1.63
UBR4-214ENST00000486515 STARD9Q9P2P6 4700 aa4.84□□□□□ -1.63
UBR4-214ENST00000486515 H7C423 109 aa4.83□□□□□ -1.64
UBR4-214ENST00000486515 J3QL48 77 aa4.83□□□□□ -1.64
UBR4-214ENST00000486515 HIST1H2BKO60814 126 aa4.83□□□□□ -1.64
UBR4-214ENST00000486515 HIST1H2BJP06899 126 aa4.83□□□□□ -1.64
UBR4-214ENST00000486515 HIST1H2BOP23527 126 aa4.83□□□□□ -1.64
UBR4-214ENST00000486515 HIST1H2BBP33778 126 aa4.83□□□□□ -1.64
UBR4-214ENST00000486515 TIRAPP58753 221 aa4.83□□□□□ -1.64
UBR4-214ENST00000486515 HIST1H2BDP58876 126 aa4.83□□□□□ -1.64
UBR4-214ENST00000486515 HIST1H2BCP62807 126 aa4.83□□□□□ -1.64
UBR4-214ENST00000486515 HIST2H2BEQ16778 126 aa4.83□□□□□ -1.64
UBR4-214ENST00000486515 PAPPA-AS1Q5QFB9 102 aa4.83□□□□□ -1.64
UBR4-214ENST00000486515 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.83□□□□□ -1.64
UBR4-214ENST00000486515 DEFB104AQ8WTQ1 72 aa4.83□□□□□ -1.64
UBR4-214ENST00000486515 HIST1H2BHQ93079 126 aa4.83□□□□□ -1.64
UBR4-214ENST00000486515 HIST1H2BNQ99877 126 aa4.83□□□□□ -1.64
UBR4-214ENST00000486515 HIST1H2BMQ99879 126 aa4.83□□□□□ -1.64
UBR4-214ENST00000486515 CYSLTR1Q9Y271 337 aa4.83□□□□□ -1.64
UBR4-214ENST00000486515 DMBT1Q9UGM3 2413 aaPredicted RBP4.82□□□□□ -1.64
UBR4-214ENST00000486515 GAS8-AS1O95177 125 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms