RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 TRBV7-3A0A075B6L6 115 aa3.89□□□□□ -1.79
COPS3-208ENST00000486032 TRAV9-1A0A075B6T8 112 aa3.89□□□□□ -1.79
COPS3-208ENST00000486032 TRBV10-1A0A0K0K1A3 114 aa3.89□□□□□ -1.79
COPS3-208ENST00000486032 LOC389332A0A1B0GUA5 103 aa3.89□□□□□ -1.79
COPS3-208ENST00000486032 APCSP02743 223 aa3.89□□□□□ -1.79
COPS3-208ENST00000486032 PMCHP20382 165 aa3.89□□□□□ -1.79
COPS3-208ENST00000486032 RPS10P46783 165 aaKnown RBP3.89□□□□□ -1.79
COPS3-208ENST00000486032 CCL18P55774 89 aa3.89□□□□□ -1.79
COPS3-208ENST00000486032 ESRGQ1W209 222 aa3.89□□□□□ -1.79
COPS3-208ENST00000486032 LYPD5Q6UWN5 251 aa3.89□□□□□ -1.79
COPS3-208ENST00000486032 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.89□□□□□ -1.79
COPS3-208ENST00000486032 MRAP2Q96G30 205 aa3.89□□□□□ -1.79
COPS3-208ENST00000486032 NIT2Q9NQR4 276 aa3.89□□□□□ -1.79
COPS3-208ENST00000486032 TRAPPC1Q9Y5R8 145 aa3.89□□□□□ -1.79
COPS3-208ENST00000486032 DNAH11Q96DT5 4516 aa3.89□□□□□ -1.79
COPS3-208ENST00000486032 DYNC1H1Q14204 4646 aaKnown RBP3.88□□□□□ -1.79
COPS3-208ENST00000486032 BIRC6Q9NR09 4857 aa3.88□□□□□ -1.79
COPS3-208ENST00000486032 FRAS1Q86XX4 4008 aa3.88□□□□□ -1.79
COPS3-208ENST00000486032 IGLV2-18A0A075B6J9 118 aa3.88□□□□□ -1.79
COPS3-208ENST00000486032 H3BNG1 76 aa3.88□□□□□ -1.79
COPS3-208ENST00000486032 NPYP01303 97 aa3.88□□□□□ -1.79
COPS3-208ENST00000486032 HLA-DQA1P01909 254 aa3.88□□□□□ -1.79
COPS3-208ENST00000486032 TCTAP57738 103 aa3.88□□□□□ -1.79
COPS3-208ENST00000486032 UBE2D3P61077 147 aa3.88□□□□□ -1.79
COPS3-208ENST00000486032 UBE2D2P62837 147 aa3.88□□□□□ -1.79
COPS3-208ENST00000486032 COX19Q49B96 90 aa3.88□□□□□ -1.79
COPS3-208ENST00000486032 ORMDL3Q8N138 153 aa3.88□□□□□ -1.79
COPS3-208ENST00000486032 DNAJC30Q96LL9 226 aa3.88□□□□□ -1.79
COPS3-208ENST00000486032 PRELID3AQ96N28 172 aa3.88□□□□□ -1.79
COPS3-208ENST00000486032 GTSF1LQ9H1H1 148 aa3.88□□□□□ -1.79
COPS3-208ENST00000486032 ST20Q9HBF5 79 aa3.88□□□□□ -1.79
COPS3-208ENST00000486032 LINC00588Q9Y4M8 146 aa3.88□□□□□ -1.79
COPS3-208ENST00000486032 TRBV24-1A0A075B6N3 115 aa3.87□□□□□ -1.79
COPS3-208ENST00000486032 SDHAF1A6NFY7 115 aa3.87□□□□□ -1.79
COPS3-208ENST00000486032 TMEM262E9PQX1 116 aa3.87□□□□□ -1.79
COPS3-208ENST00000486032 M0R2N4 97 aa3.87□□□□□ -1.79
COPS3-208ENST00000486032 TNFRSF6BO95407 300 aa3.87□□□□□ -1.79
COPS3-208ENST00000486032 IGHV3-30P01768 117 aa3.87□□□□□ -1.79
COPS3-208ENST00000486032 IGHV3-33P01772 117 aa3.87□□□□□ -1.79
COPS3-208ENST00000486032 IGHV3-30-3P0DP02 117 aa3.87□□□□□ -1.79
COPS3-208ENST00000486032 IGHV3-30-5P0DP03 117 aa3.87□□□□□ -1.79
COPS3-208ENST00000486032 COTL1Q14019 142 aa3.87□□□□□ -1.79
COPS3-208ENST00000486032 SH2D6Q7Z4S9 175 aa3.87□□□□□ -1.79
COPS3-208ENST00000486032 LINC00476Q8WZB0 136 aa3.87□□□□□ -1.79
COPS3-208ENST00000486032 YPEL4Q96NS1 127 aa3.87□□□□□ -1.79
COPS3-208ENST00000486032 GNB1LQ9BYB4 327 aa3.87□□□□□ -1.79
COPS3-208ENST00000486032 PLA2G2DQ9UNK4 145 aa3.87□□□□□ -1.79
COPS3-208ENST00000486032 TRAV8-6A0A0B4J262 113 aa3.86□□□□□ -1.79
COPS3-208ENST00000486032 TCAPO15273 167 aa3.86□□□□□ -1.79
COPS3-208ENST00000486032 PPP1R17O96001 155 aa3.86□□□□□ -1.79
COPS3-208ENST00000486032 PPBPP02775 128 aa3.86□□□□□ -1.79
COPS3-208ENST00000486032 MT-ND6P03923 174 aa3.86□□□□□ -1.79
COPS3-208ENST00000486032 LINC00694P0DN24 101 aa3.86□□□□□ -1.79
COPS3-208ENST00000486032 FCER1GP30273 86 aa3.86□□□□□ -1.79
COPS3-208ENST00000486032 AMTP48728 403 aa3.86□□□□□ -1.79
COPS3-208ENST00000486032 SUMO2P61956 95 aaKnown RBP3.86□□□□□ -1.79
COPS3-208ENST00000486032 GAGE6Q13070 117 aa3.86□□□□□ -1.79
COPS3-208ENST00000486032 IQCJQ1A5X6 159 aa3.86□□□□□ -1.79
COPS3-208ENST00000486032 LELP1Q5T871 98 aa3.86□□□□□ -1.79
COPS3-208ENST00000486032 LGALS9CQ6DKI2 356 aa3.86□□□□□ -1.79
COPS3-208ENST00000486032 NTM-AS1Q6ZSK4 140 aa3.86□□□□□ -1.79
COPS3-208ENST00000486032 DAZ4Q86SG3 579 aaKnown RBP3.86□□□□□ -1.79
COPS3-208ENST00000486032 WFDC10BQ8IUB3 73 aa3.86□□□□□ -1.79
COPS3-208ENST00000486032 NRACQ8N912 160 aa3.86□□□□□ -1.79
COPS3-208ENST00000486032 CHCHD5Q9BSY4 110 aa3.86□□□□□ -1.79
COPS3-208ENST00000486032 TMEM70Q9BUB7 260 aa3.86□□□□□ -1.79
COPS3-208ENST00000486032 MAP1LC3AQ9H492 121 aa3.86□□□□□ -1.79
COPS3-208ENST00000486032 DAZ3Q9NR90 486 aaKnown RBP3.86□□□□□ -1.79
COPS3-208ENST00000486032 MRPS16Q9Y3D3 137 aaKnown RBP3.86□□□□□ -1.79
COPS3-208ENST00000486032 TRBV25-1A0A075B6N4 114 aa3.85□□□□□ -1.79
COPS3-208ENST00000486032 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.85□□□□□ -1.79
COPS3-208ENST00000486032 TRBV6-8A0A0A6YYG3 113 aa3.85□□□□□ -1.79
COPS3-208ENST00000486032 IGHV1-24A0A0C4DH33 117 aa3.85□□□□□ -1.79
COPS3-208ENST00000486032 TRBV6-5A0A0K0K1A5 114 aa3.85□□□□□ -1.79
COPS3-208ENST00000486032 LCE6AA0A183 80 aa3.85□□□□□ -1.79
COPS3-208ENST00000486032 IGKV2-29A2NJV5 120 aaPredicted RBP3.85□□□□□ -1.79
COPS3-208ENST00000486032 COLCA2A8K830 154 aa3.85□□□□□ -1.79
COPS3-208ENST00000486032 I3L3M4 83 aa3.85□□□□□ -1.79
COPS3-208ENST00000486032 VCYO14598 125 aa3.85□□□□□ -1.79
COPS3-208ENST00000486032 UBE2L6O14933 153 aa3.85□□□□□ -1.79
COPS3-208ENST00000486032 SIVA1O15304 175 aa3.85□□□□□ -1.79
COPS3-208ENST00000486032 TRGC2P03986 189 aa3.85□□□□□ -1.79
COPS3-208ENST00000486032 RAB5AP20339 215 aa3.85□□□□□ -1.79
COPS3-208ENST00000486032 PRSS3P2Q8NHM4 247 aa3.85□□□□□ -1.79
COPS3-208ENST00000486032 KIR2DL4Q99706 377 aa3.85□□□□□ -1.79
COPS3-208ENST00000486032 ALKBH7Q9BT30 221 aaPredicted RBP3.85□□□□□ -1.79
COPS3-208ENST00000486032 TMEM243Q9BU79 118 aa3.85□□□□□ -1.79
COPS3-208ENST00000486032 SMIM2Q9BVW6 85 aa3.85□□□□□ -1.79
COPS3-208ENST00000486032 Q9H8V8 135 aa3.85□□□□□ -1.79
COPS3-208ENST00000486032 A0A087WX48 190 aa3.84□□□□□ -1.79
COPS3-208ENST00000486032 PHOX2AO14813 284 aa3.84□□□□□ -1.79
COPS3-208ENST00000486032 TSHBP01222 138 aa3.84□□□□□ -1.79
COPS3-208ENST00000486032 IFI27P40305 119 aaPredicted RBP3.84□□□□□ -1.79
COPS3-208ENST00000486032 POLR2KP53803 58 aaKnown RBP3.84□□□□□ -1.79
COPS3-208ENST00000486032 TMEM97Q5BJF2 176 aa3.84□□□□□ -1.79
COPS3-208ENST00000486032 AMMECR1LQ6DCA0 310 aa3.84□□□□□ -1.79
COPS3-208ENST00000486032 RNASEKQ6P5S7 137 aaKnown RBP3.84□□□□□ -1.79
COPS3-208ENST00000486032 FA2HQ7L5A8 372 aa3.84□□□□□ -1.79
COPS3-208ENST00000486032 C20orf78Q9BR46 151 aa3.84□□□□□ -1.79
COPS3-208ENST00000486032 IGKV3OR2-268A0A0C4DH90 116 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms