RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 A0A096LNJ9 63 aa6.77□□□□□ -1.33
CTSA-208ENST00000485627 H0Y8G0 127 aa6.77□□□□□ -1.33
CTSA-208ENST00000485627 COTL1Q14019 142 aa6.77□□□□□ -1.33
CTSA-208ENST00000485627 PET117Q6UWS5 81 aa6.77□□□□□ -1.33
CTSA-208ENST00000485627 LINC00173Q6ZV60 143 aa6.77□□□□□ -1.33
CTSA-208ENST00000485627 IFI27L1Q96BM0 104 aa6.77□□□□□ -1.33
CTSA-208ENST00000485627 SCGB3A1Q96QR1 104 aa6.77□□□□□ -1.33
CTSA-208ENST00000485627 RETNQ9HD89 108 aa6.77□□□□□ -1.33
CTSA-208ENST00000485627 CYSLTR1Q9Y271 337 aa6.77□□□□□ -1.33
CTSA-208ENST00000485627 GAGE12JA6NER3 117 aa6.76□□□□□ -1.33
CTSA-208ENST00000485627 SYS1-DBNDD2H3BUS1 97 aa6.76□□□□□ -1.33
CTSA-208ENST00000485627 K7EIL1 84 aa6.76□□□□□ -1.33
CTSA-208ENST00000485627 ATP5G1P05496 136 aa6.76□□□□□ -1.33
CTSA-208ENST00000485627 PRSS1P07477 247 aa6.76□□□□□ -1.33
CTSA-208ENST00000485627 GAGE1Q13065 139 aa6.76□□□□□ -1.33
CTSA-208ENST00000485627 GAGE4Q13068 117 aa6.76□□□□□ -1.33
CTSA-208ENST00000485627 GAGE5Q13069 117 aa6.76□□□□□ -1.33
CTSA-208ENST00000485627 FHL2Q14192 279 aa6.76□□□□□ -1.33
CTSA-208ENST00000485627 GAGE13Q4V321 117 aa6.76□□□□□ -1.33
CTSA-208ENST00000485627 LCE2AQ5TA79 106 aaPredicted RBP6.76□□□□□ -1.33
CTSA-208ENST00000485627 C2orf66Q6UXQ4 117 aa6.76□□□□□ -1.33
CTSA-208ENST00000485627 Q6ZN92 141 aa6.76□□□□□ -1.33
CTSA-208ENST00000485627 DAZ4Q86SG3 579 aaKnown RBP6.76□□□□□ -1.33
CTSA-208ENST00000485627 DEFB104AQ8WTQ1 72 aa6.76□□□□□ -1.33
CTSA-208ENST00000485627 PHLDA1Q8WV24 401 aaPredicted RBP6.76□□□□□ -1.33
CTSA-208ENST00000485627 TOMM6Q96B49 74 aa6.76□□□□□ -1.33
CTSA-208ENST00000485627 SPATA25Q9BR10 227 aa6.76□□□□□ -1.33
CTSA-208ENST00000485627 DAZ3Q9NR90 486 aaKnown RBP6.76□□□□□ -1.33
CTSA-208ENST00000485627 HHLA3Q9XRX5 114 aa6.76□□□□□ -1.33
CTSA-208ENST00000485627 DNAH3Q8TD57 4116 aa6.75□□□□□ -1.33
CTSA-208ENST00000485627 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.75□□□□□ -1.33
CTSA-208ENST00000485627 TSHBP01222 138 aa6.75□□□□□ -1.33
CTSA-208ENST00000485627 SBSPONQ8IVN8 264 aa6.75□□□□□ -1.33
CTSA-208ENST00000485627 MRAPQ8TCY5 172 aa6.75□□□□□ -1.33
CTSA-208ENST00000485627 PRO0255Q9UI72 69 aa6.75□□□□□ -1.33
CTSA-208ENST00000485627 IGHV3-38A0A0C4DH36 116 aa6.74□□□□□ -1.33
CTSA-208ENST00000485627 PAX4O43316 350 aa6.74□□□□□ -1.33
CTSA-208ENST00000485627 KRTAP17-1Q9BYP8 105 aa6.74□□□□□ -1.33
CTSA-208ENST00000485627 C11orf68Q9H3H3 251 aaKnown RBP6.74□□□□□ -1.33
CTSA-208ENST00000485627 ZMAT4Q9H898 229 aa6.74□□□□□ -1.33
CTSA-208ENST00000485627 Q9UF83 564 aa6.74□□□□□ -1.33
CTSA-208ENST00000485627 CELA1Q9UNI1 258 aa6.74□□□□□ -1.33
CTSA-208ENST00000485627 F5H768 121 aa6.73□□□□□ -1.33
CTSA-208ENST00000485627 HTN3P15516 51 aa6.73□□□□□ -1.33
CTSA-208ENST00000485627 CRYBA4P53673 196 aa6.73□□□□□ -1.33
CTSA-208ENST00000485627 UBE2D3P61077 147 aa6.73□□□□□ -1.33
CTSA-208ENST00000485627 UBE2D2P62837 147 aa6.73□□□□□ -1.33
CTSA-208ENST00000485627 SMAGPQ0VAQ4 97 aa6.73□□□□□ -1.33
CTSA-208ENST00000485627 ERASQ7Z444 233 aa6.73□□□□□ -1.33
CTSA-208ENST00000485627 SPATA12Q7Z6I5 190 aa6.73□□□□□ -1.33
CTSA-208ENST00000485627 TMEM141Q96I45 108 aa6.73□□□□□ -1.33
CTSA-208ENST00000485627 NACAE9PAV3 2078 aa6.73□□□□□ -1.33
CTSA-208ENST00000485627 LOC100131303A0A0U1RQF7 123 aa6.72□□□□□ -1.33
CTSA-208ENST00000485627 GYPEP15421 78 aa6.72□□□□□ -1.33
CTSA-208ENST00000485627 RPL39P62891 51 aaKnown RBP6.72□□□□□ -1.33
CTSA-208ENST00000485627 TMEM97Q5BJF2 176 aa6.72□□□□□ -1.33
CTSA-208ENST00000485627 PAPPA-AS1Q5QFB9 102 aa6.72□□□□□ -1.33
CTSA-208ENST00000485627 LGALS9CQ6DKI2 356 aa6.72□□□□□ -1.33
CTSA-208ENST00000485627 C20orf203Q8NBC4 194 aa6.72□□□□□ -1.33
CTSA-208ENST00000485627 TIMM17AQ99595 171 aa6.72□□□□□ -1.33
CTSA-208ENST00000485627 VAMP8Q9BV40 100 aa6.72□□□□□ -1.33
CTSA-208ENST00000485627 TENM3Q9P273 2699 aa6.72□□□□□ -1.33
CTSA-208ENST00000485627 A0A0J9YWU9 116 aa6.71□□□□□ -1.34
CTSA-208ENST00000485627 HSBP1L1C9JCN9 74 aa6.71□□□□□ -1.34
CTSA-208ENST00000485627 LINC01545Q5VT33 79 aa6.71□□□□□ -1.34
CTSA-208ENST00000485627 TEX43Q6ZNM6 134 aa6.71□□□□□ -1.34
CTSA-208ENST00000485627 Q8N976 141 aa6.71□□□□□ -1.34
CTSA-208ENST00000485627 TM2D3Q9BRN9 247 aa6.71□□□□□ -1.34
CTSA-208ENST00000485627 GTSF1LQ9H1H1 148 aa6.71□□□□□ -1.34
CTSA-208ENST00000485627 TRBV25-1A0A075B6N4 114 aa6.7□□□□□ -1.34
CTSA-208ENST00000485627 A0A0J9YY99 117 aa6.7□□□□□ -1.34
CTSA-208ENST00000485627 H3BS24 57 aa6.7□□□□□ -1.34
CTSA-208ENST00000485627 UBE2L6O14933 153 aa6.7□□□□□ -1.34
CTSA-208ENST00000485627 C12orf74Q32Q52 190 aa6.7□□□□□ -1.34
CTSA-208ENST00000485627 DGAT2L7PQ6IED9 249 aa6.7□□□□□ -1.34
CTSA-208ENST00000485627 ATOH7Q8N100 152 aa6.7□□□□□ -1.34
CTSA-208ENST00000485627 ATP6V0E2Q8NHE4 81 aa6.7□□□□□ -1.34
CTSA-208ENST00000485627 TMEM243Q9BU79 118 aa6.7□□□□□ -1.34
CTSA-208ENST00000485627 CHCHD7Q9BUK0 85 aa6.7□□□□□ -1.34
CTSA-208ENST00000485627 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.69□□□□□ -1.34
CTSA-208ENST00000485627 TRAV9-2A0A087WT02 112 aa6.69□□□□□ -1.34
CTSA-208ENST00000485627 TRAV26-1A0A087WT03 109 aa6.69□□□□□ -1.34
CTSA-208ENST00000485627 A0A087WX48 190 aa6.69□□□□□ -1.34
CTSA-208ENST00000485627 TRAV12-1A0A0B4J245 112 aa6.69□□□□□ -1.34
CTSA-208ENST00000485627 IGKV2-29A2NJV5 120 aaPredicted RBP6.69□□□□□ -1.34
CTSA-208ENST00000485627 IGIPA6NJ69 53 aa6.69□□□□□ -1.34
CTSA-208ENST00000485627 TSTD3H0UI37 97 aa6.69□□□□□ -1.34
CTSA-208ENST00000485627 SH2D6Q7Z4S9 175 aa6.69□□□□□ -1.34
CTSA-208ENST00000485627 C11orf45Q8TAV5 145 aa6.69□□□□□ -1.34
CTSA-208ENST00000485627 BAALCQ8WXS3 180 aa6.69□□□□□ -1.34
CTSA-208ENST00000485627 PMCHL2Q9BQD1 86 aa6.69□□□□□ -1.34
CTSA-208ENST00000485627 VCX2Q9H322 139 aa6.69□□□□□ -1.34
CTSA-208ENST00000485627 SPANXA1Q9NS26 97 aa6.69□□□□□ -1.34
CTSA-208ENST00000485627 PAM16Q9Y3D7 125 aa6.69□□□□□ -1.34
CTSA-208ENST00000485627 PYGO1Q9Y3Y4 419 aa6.69□□□□□ -1.34
CTSA-208ENST00000485627 DPM2O94777 84 aa6.68□□□□□ -1.34
CTSA-208ENST00000485627 IGKCP01834 107 aa6.68□□□□□ -1.34
CTSA-208ENST00000485627 NPSP0C0P6 89 aa6.68□□□□□ -1.34
CTSA-208ENST00000485627 ODF1Q14990 250 aa6.68□□□□□ -1.34
CTSA-208ENST00000485627 PMVKQ15126 192 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms