RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 SLC7A5P1Q8MH63 180 aa5.66□□□□□ -1.5
SF3A1-208ENST00000485618 TMEM18Q96B42 140 aa5.66□□□□□ -1.5
SF3A1-208ENST00000485618 GNB1LQ9BYB4 327 aa5.66□□□□□ -1.5
SF3A1-208ENST00000485618 SMCO4Q9NRQ5 59 aa5.66□□□□□ -1.5
SF3A1-208ENST00000485618 Q9UF83 564 aa5.66□□□□□ -1.5
SF3A1-208ENST00000485618 KMT2AQ03164 3969 aa5.65□□□□□ -1.5
SF3A1-208ENST00000485618 TRBV24-1A0A075B6N3 115 aa5.65□□□□□ -1.5
SF3A1-208ENST00000485618 TRAV8-3A0A0A6YYJ7 113 aa5.65□□□□□ -1.5
SF3A1-208ENST00000485618 TRBV27A0A0K0K1C4 114 aa5.65□□□□□ -1.5
SF3A1-208ENST00000485618 H7C423 109 aa5.65□□□□□ -1.5
SF3A1-208ENST00000485618 APCSP02743 223 aa5.65□□□□□ -1.5
SF3A1-208ENST00000485618 RAB5AP20339 215 aa5.65□□□□□ -1.5
SF3A1-208ENST00000485618 LINC00336Q6ZUF6 198 aa5.65□□□□□ -1.5
SF3A1-208ENST00000485618 C6orf223Q8N319 242 aa5.65□□□□□ -1.5
SF3A1-208ENST00000485618 RMI2Q96E14 147 aa5.65□□□□□ -1.5
SF3A1-208ENST00000485618 RNF185Q96GF1 192 aa5.65□□□□□ -1.5
SF3A1-208ENST00000485618 PRELID3AQ96N28 172 aa5.65□□□□□ -1.5
SF3A1-208ENST00000485618 TM2D2Q9BX73 214 aa5.65□□□□□ -1.5
SF3A1-208ENST00000485618 COX11Q9Y6N1 276 aa5.65□□□□□ -1.5
SF3A1-208ENST00000485618 UBR4Q5T4S7 5183 aa5.64□□□□□ -1.51
SF3A1-208ENST00000485618 D6R8Y8 96 aa5.64□□□□□ -1.51
SF3A1-208ENST00000485618 TNFRSF6BO95407 300 aa5.64□□□□□ -1.51
SF3A1-208ENST00000485618 RPL32P62910 135 aaKnown RBP5.64□□□□□ -1.51
SF3A1-208ENST00000485618 Q0VG73 95 aa5.64□□□□□ -1.51
SF3A1-208ENST00000485618 LAGE3Q14657 143 aa5.64□□□□□ -1.51
SF3A1-208ENST00000485618 AMMECR1LQ6DCA0 310 aa5.64□□□□□ -1.51
SF3A1-208ENST00000485618 Q6ZR54 194 aa5.64□□□□□ -1.51
SF3A1-208ENST00000485618 WFDC10BQ8IUB3 73 aa5.64□□□□□ -1.51
SF3A1-208ENST00000485618 RPL39LQ96EH5 51 aaKnown RBP5.64□□□□□ -1.51
SF3A1-208ENST00000485618 TMEM101Q96IK0 257 aa5.64□□□□□ -1.51
SF3A1-208ENST00000485618 TMEM70Q9BUB7 260 aa5.64□□□□□ -1.51
SF3A1-208ENST00000485618 MAP1LC3AQ9H492 121 aa5.64□□□□□ -1.51
SF3A1-208ENST00000485618 IBA57-AS1B1ANH7 110 aa5.63□□□□□ -1.51
SF3A1-208ENST00000485618 K7EMI3 77 aa5.63□□□□□ -1.51
SF3A1-208ENST00000485618 EREGO14944 169 aa5.63□□□□□ -1.51
SF3A1-208ENST00000485618 IGHV3-30P01768 117 aa5.63□□□□□ -1.51
SF3A1-208ENST00000485618 IGHV3-33P01772 117 aa5.63□□□□□ -1.51
SF3A1-208ENST00000485618 CRPP02741 224 aa5.63□□□□□ -1.51
SF3A1-208ENST00000485618 IGHV3-30-3P0DP02 117 aa5.63□□□□□ -1.51
SF3A1-208ENST00000485618 IGHV3-30-5P0DP03 117 aa5.63□□□□□ -1.51
SF3A1-208ENST00000485618 POLR2KP53803 58 aaKnown RBP5.63□□□□□ -1.51
SF3A1-208ENST00000485618 FABP9Q0Z7S8 132 aa5.63□□□□□ -1.51
SF3A1-208ENST00000485618 NIT1Q86X76 327 aa5.63□□□□□ -1.51
SF3A1-208ENST00000485618 NRACQ8N912 160 aa5.63□□□□□ -1.51
SF3A1-208ENST00000485618 DNAH10Q8IVF4 4471 aa5.62□□□□□ -1.51
SF3A1-208ENST00000485618 A0A1B0GUV1 79 aa5.62□□□□□ -1.51
SF3A1-208ENST00000485618 SMKR1H3BMG3 65 aa5.62□□□□□ -1.51
SF3A1-208ENST00000485618 PSCAO43653 123 aa5.62□□□□□ -1.51
SF3A1-208ENST00000485618 ZNF25P17030 456 aaPredicted RBP5.62□□□□□ -1.51
SF3A1-208ENST00000485618 DGAT2L7PQ6IED9 249 aa5.62□□□□□ -1.51
SF3A1-208ENST00000485618 NXT2Q9NPJ8 142 aaKnown RBP5.62□□□□□ -1.51
SF3A1-208ENST00000485618 TRAPPC1Q9Y5R8 145 aa5.62□□□□□ -1.51
SF3A1-208ENST00000485618 VPS13DQ5THJ4 4388 aa5.62□□□□□ -1.51
SF3A1-208ENST00000485618 ANGP03950 147 aaKnown RBP5.61□□□□□ -1.51
SF3A1-208ENST00000485618 RPS10P46783 165 aaKnown RBP5.61□□□□□ -1.51
SF3A1-208ENST00000485618 RBX1P62877 108 aa5.61□□□□□ -1.51
SF3A1-208ENST00000485618 GAGE6Q13070 117 aa5.61□□□□□ -1.51
SF3A1-208ENST00000485618 RNASEKQ6P5S7 137 aaKnown RBP5.61□□□□□ -1.51
SF3A1-208ENST00000485618 ATRAIDQ6UW56 229 aa5.61□□□□□ -1.51
SF3A1-208ENST00000485618 NTM-AS1Q6ZSK4 140 aa5.61□□□□□ -1.51
SF3A1-208ENST00000485618 SMIM2Q9BVW6 85 aa5.61□□□□□ -1.51
SF3A1-208ENST00000485618 MRPL18Q9H0U6 180 aaKnown RBP5.61□□□□□ -1.51
SF3A1-208ENST00000485618 KLK12Q9UKR0 248 aa5.61□□□□□ -1.51
SF3A1-208ENST00000485618 TGIF2-C20orf24A0A0A6YYL0 155 aa5.6□□□□□ -1.51
SF3A1-208ENST00000485618 TRAV8-4A0A0B4J246 113 aa5.6□□□□□ -1.51
SF3A1-208ENST00000485618 LINC01549A6NIU2 74 aa5.6□□□□□ -1.51
SF3A1-208ENST00000485618 PRSS47A8MTI9 375 aa5.6□□□□□ -1.51
SF3A1-208ENST00000485618 TSHBP01222 138 aa5.6□□□□□ -1.51
SF3A1-208ENST00000485618 NPYP01303 97 aa5.6□□□□□ -1.51
SF3A1-208ENST00000485618 S100A1P23297 94 aa5.6□□□□□ -1.51
SF3A1-208ENST00000485618 MIAQ16674 131 aa5.6□□□□□ -1.51
SF3A1-208ENST00000485618 ORMDL2Q53FV1 153 aa5.6□□□□□ -1.51
SF3A1-208ENST00000485618 Q8N8P6 123 aa5.6□□□□□ -1.51
SF3A1-208ENST00000485618 OR5A1Q8NGJ0 315 aa5.6□□□□□ -1.51
SF3A1-208ENST00000485618 PRSS3P2Q8NHM4 247 aa5.6□□□□□ -1.51
SF3A1-208ENST00000485618 HERC1Q15751 4861 aa5.6□□□□□ -1.51
SF3A1-208ENST00000485618 LOC389332A0A1B0GUA5 103 aa5.59□□□□□ -1.51
SF3A1-208ENST00000485618 FGF6P10767 208 aa5.59□□□□□ -1.51
SF3A1-208ENST00000485618 RAB5BP61020 215 aa5.59□□□□□ -1.51
SF3A1-208ENST00000485618 UBE2WQ96B02 151 aa5.59□□□□□ -1.51
SF3A1-208ENST00000485618 C1orf43Q9BWL3 253 aa5.59□□□□□ -1.51
SF3A1-208ENST00000485618 Q9HAA7 133 aa5.59□□□□□ -1.51
SF3A1-208ENST00000485618 A0A1B0GVY2 172 aa5.58□□□□□ -1.52
SF3A1-208ENST00000485618 PRSS29PA6NIE9 313 aa5.58□□□□□ -1.52
SF3A1-208ENST00000485618 CCL25O15444 150 aa5.58□□□□□ -1.52
SF3A1-208ENST00000485618 GAS8-AS1O95177 125 aa5.58□□□□□ -1.52
SF3A1-208ENST00000485618 ESDP10768 282 aa5.58□□□□□ -1.52
SF3A1-208ENST00000485618 KIAA1644Q3SXP7 199 aa5.58□□□□□ -1.52
SF3A1-208ENST00000485618 MPV17L2Q567V2 206 aa5.58□□□□□ -1.52
SF3A1-208ENST00000485618 PAPPA-AS1Q5QFB9 102 aa5.58□□□□□ -1.52
SF3A1-208ENST00000485618 FA2HQ7L5A8 372 aa5.58□□□□□ -1.52
SF3A1-208ENST00000485618 MRPL52Q86TS9 123 aaKnown RBP5.58□□□□□ -1.52
SF3A1-208ENST00000485618 LINC00269Q8N2A0 174 aa5.58□□□□□ -1.52
SF3A1-208ENST00000485618 Q8N976 141 aa5.58□□□□□ -1.52
SF3A1-208ENST00000485618 TIMM21Q9BVV7 248 aa5.58□□□□□ -1.52
SF3A1-208ENST00000485618 CSDC2Q9Y534 153 aaKnown RBP5.58□□□□□ -1.52
SF3A1-208ENST00000485618 DNAH6Q9C0G6 4158 aa5.57□□□□□ -1.52
SF3A1-208ENST00000485618 IGKV2D-24A0A075B6R9 120 aa5.57□□□□□ -1.52
SF3A1-208ENST00000485618 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.57□□□□□ -1.52
SF3A1-208ENST00000485618 IGKV2-29A2NJV5 120 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 219.5 ms