RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 TRAV8-6A0A0B4J262 113 aa12.05□□□□□ -0.48
CHMP3-207ENST00000485465 AMTP48728 403 aa12.05□□□□□ -0.48
CHMP3-207ENST00000485465 LGALS9CQ6DKI2 356 aa12.04□□□□□ -0.48
CHMP3-207ENST00000485465 UPK3BQ9BT76 320 aa12.04□□□□□ -0.48
CHMP3-207ENST00000485465 TMEM243Q9BU79 118 aa12.04□□□□□ -0.48
CHMP3-207ENST00000485465 CHCHD7Q9BUK0 85 aa12.04□□□□□ -0.48
CHMP3-207ENST00000485465 C1orf196B1AJZ1 125 aa12.03□□□□□ -0.48
CHMP3-207ENST00000485465 K7EMI3 77 aa12.03□□□□□ -0.48
CHMP3-207ENST00000485465 ESDP10768 282 aa12.03□□□□□ -0.48
CHMP3-207ENST00000485465 Q0VG73 95 aa12.03□□□□□ -0.48
CHMP3-207ENST00000485465 FA2HQ7L5A8 372 aa12.03□□□□□ -0.48
CHMP3-207ENST00000485465 NIT1Q86X76 327 aa12.03□□□□□ -0.48
CHMP3-207ENST00000485465 LINC01546A6NGU7 62 aa12.02□□□□□ -0.49
CHMP3-207ENST00000485465 HIST1H2BKO60814 126 aa12.02□□□□□ -0.49
CHMP3-207ENST00000485465 HIST1H2BJP06899 126 aa12.02□□□□□ -0.49
CHMP3-207ENST00000485465 HIST1H2BOP23527 126 aa12.02□□□□□ -0.49
CHMP3-207ENST00000485465 HIST1H2BBP33778 126 aa12.02□□□□□ -0.49
CHMP3-207ENST00000485465 HIST1H2BDP58876 126 aa12.02□□□□□ -0.49
CHMP3-207ENST00000485465 HIST1H2BCP62807 126 aa12.02□□□□□ -0.49
CHMP3-207ENST00000485465 HIST2H2BEQ16778 126 aa12.02□□□□□ -0.49
CHMP3-207ENST00000485465 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.02□□□□□ -0.49
CHMP3-207ENST00000485465 WFDC10BQ8IUB3 73 aa12.02□□□□□ -0.49
CHMP3-207ENST00000485465 HIST1H2BHQ93079 126 aa12.02□□□□□ -0.49
CHMP3-207ENST00000485465 URB1-AS1Q96HZ7 61 aa12.02□□□□□ -0.49
CHMP3-207ENST00000485465 HIST1H2BNQ99877 126 aa12.02□□□□□ -0.49
CHMP3-207ENST00000485465 HIST1H2BMQ99879 126 aa12.02□□□□□ -0.49
CHMP3-207ENST00000485465 CHCHD5Q9BSY4 110 aa12.02□□□□□ -0.49
CHMP3-207ENST00000485465 LINC00614P0C842 121 aa12.01□□□□□ -0.49
CHMP3-207ENST00000485465 RAB5BP61020 215 aa12.01□□□□□ -0.49
CHMP3-207ENST00000485465 LAGE3Q14657 143 aa12.01□□□□□ -0.49
CHMP3-207ENST00000485465 ORMDL2Q53FV1 153 aa12.01□□□□□ -0.49
CHMP3-207ENST00000485465 BAGE3Q86Y29 109 aa12.01□□□□□ -0.49
CHMP3-207ENST00000485465 GAGE6Q13070 117 aa12□□□□□ -0.49
CHMP3-207ENST00000485465 LINC00476Q8WZB0 136 aa12□□□□□ -0.49
CHMP3-207ENST00000485465 VPS13DQ5THJ4 4388 aa12□□□□□ -0.49
CHMP3-207ENST00000485465 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.99□□□□□ -0.49
CHMP3-207ENST00000485465 IGKV2-29A2NJV5 120 aaPredicted RBP11.99□□□□□ -0.49
CHMP3-207ENST00000485465 UBE2L6O14933 153 aa11.99□□□□□ -0.49
CHMP3-207ENST00000485465 RNASEKQ6P5S7 137 aaKnown RBP11.99□□□□□ -0.49
CHMP3-207ENST00000485465 C20orf203Q8NBC4 194 aa11.99□□□□□ -0.49
CHMP3-207ENST00000485465 Q9H8V8 135 aa11.99□□□□□ -0.49
CHMP3-207ENST00000485465 AP5S1Q9NUS5 200 aa11.99□□□□□ -0.49
CHMP3-207ENST00000485465 ALMS1Q8TCU4 4167 aa11.99□□□□□ -0.49
CHMP3-207ENST00000485465 LYSTQ99698 3801 aa11.98□□□□□ -0.49
CHMP3-207ENST00000485465 TMEM262E9PQX1 116 aa11.98□□□□□ -0.49
CHMP3-207ENST00000485465 H7C423 109 aa11.98□□□□□ -0.49
CHMP3-207ENST00000485465 SIVA1O15304 175 aa11.98□□□□□ -0.49
CHMP3-207ENST00000485465 LY6G6CO95867 125 aa11.98□□□□□ -0.49
CHMP3-207ENST00000485465 PKIAP61925 76 aa11.98□□□□□ -0.49
CHMP3-207ENST00000485465 DNAH10OSP0CZ25 163 aa11.97□□□□□ -0.49
CHMP3-207ENST00000485465 TMEM18Q96B42 140 aa11.97□□□□□ -0.49
CHMP3-207ENST00000485465 CHCHD1Q96BP2 118 aaKnown RBP11.97□□□□□ -0.49
CHMP3-207ENST00000485465 LINC01556Q5JQF7 62 aa11.96□□□□□ -0.49
CHMP3-207ENST00000485465 DNAH1Q9P2D7 4330 aa11.96□□□□□ -0.5
CHMP3-207ENST00000485465 A0A087WX48 190 aa11.95□□□□□ -0.5
CHMP3-207ENST00000485465 SERF1AO75920 110 aa11.95□□□□□ -0.5
CHMP3-207ENST00000485465 FGF6P10767 208 aa11.95□□□□□ -0.5
CHMP3-207ENST00000485465 BTF3P20290 206 aaKnown RBP11.95□□□□□ -0.5
CHMP3-207ENST00000485465 G0S2P27469 103 aa11.95□□□□□ -0.5
CHMP3-207ENST00000485465 LINC00310P59036 64 aa11.95□□□□□ -0.5
CHMP3-207ENST00000485465 RPL39P62891 51 aaKnown RBP11.95□□□□□ -0.5
CHMP3-207ENST00000485465 MPV17L2Q567V2 206 aa11.95□□□□□ -0.5
CHMP3-207ENST00000485465 Q8N3U1 123 aa11.95□□□□□ -0.5
CHMP3-207ENST00000485465 IGHV3-30P01768 117 aa11.94□□□□□ -0.5
CHMP3-207ENST00000485465 IGHV3-33P01772 117 aa11.94□□□□□ -0.5
CHMP3-207ENST00000485465 IGHV3-30-3P0DP02 117 aa11.94□□□□□ -0.5
CHMP3-207ENST00000485465 IGHV3-30-5P0DP03 117 aa11.94□□□□□ -0.5
CHMP3-207ENST00000485465 RBX1P62877 108 aa11.94□□□□□ -0.5
CHMP3-207ENST00000485465 AMMECR1LQ6DCA0 310 aa11.94□□□□□ -0.5
CHMP3-207ENST00000485465 C2orf66Q6UXQ4 117 aa11.94□□□□□ -0.5
CHMP3-207ENST00000485465 MRPL52Q86TS9 123 aaKnown RBP11.94□□□□□ -0.5
CHMP3-207ENST00000485465 CYSLTR1Q9Y271 337 aa11.94□□□□□ -0.5
CHMP3-207ENST00000485465 A0A1B0GUV1 79 aa11.93□□□□□ -0.5
CHMP3-207ENST00000485465 SMAGPQ0VAQ4 97 aa11.93□□□□□ -0.5
CHMP3-207ENST00000485465 Q8N976 141 aa11.93□□□□□ -0.5
CHMP3-207ENST00000485465 UBE2D4Q9Y2X8 147 aa11.93□□□□□ -0.5
CHMP3-207ENST00000485465 NUPR1O60356 82 aa11.92□□□□□ -0.5
CHMP3-207ENST00000485465 HSBP1O75506 76 aa11.92□□□□□ -0.5
CHMP3-207ENST00000485465 ZNF25P17030 456 aaPredicted RBP11.92□□□□□ -0.5
CHMP3-207ENST00000485465 NDUFA6P56556 154 aa11.92□□□□□ -0.5
CHMP3-207ENST00000485465 PMCHL1Q16048 86 aa11.92□□□□□ -0.5
CHMP3-207ENST00000485465 TOMM6Q96B49 74 aa11.92□□□□□ -0.5
CHMP3-207ENST00000485465 TIMM21Q9BVV7 248 aa11.92□□□□□ -0.5
CHMP3-207ENST00000485465 IGLV4-60A0A075B6I1 120 aa11.91□□□□□ -0.5
CHMP3-207ENST00000485465 A0A096LNJ9 63 aa11.91□□□□□ -0.5
CHMP3-207ENST00000485465 COA6Q5JTJ3 125 aaKnown RBP11.91□□□□□ -0.5
CHMP3-207ENST00000485465 TMEM101Q96IK0 257 aa11.91□□□□□ -0.5
CHMP3-207ENST00000485465 SPANXA1Q9NS26 97 aa11.91□□□□□ -0.5
CHMP3-207ENST00000485465 CSDC2Q9Y534 153 aaKnown RBP11.91□□□□□ -0.5
CHMP3-207ENST00000485465 TRAV9-2A0A087WT02 112 aa11.9□□□□□ -0.5
CHMP3-207ENST00000485465 LCE6AA0A183 80 aa11.9□□□□□ -0.5
CHMP3-207ENST00000485465 LINC01549A6NIU2 74 aa11.9□□□□□ -0.5
CHMP3-207ENST00000485465 HBDP02042 147 aa11.9□□□□□ -0.5
CHMP3-207ENST00000485465 DGAT2L7PQ6IED9 249 aa11.9□□□□□ -0.5
CHMP3-207ENST00000485465 OR5A1Q8NGJ0 315 aa11.9□□□□□ -0.5
CHMP3-207ENST00000485465 PYGO1Q9Y3Y4 419 aa11.9□□□□□ -0.5
CHMP3-207ENST00000485465 K7EP13 123 aa11.89□□□□□ -0.51
CHMP3-207ENST00000485465 ANGP03950 147 aaKnown RBP11.89□□□□□ -0.51
CHMP3-207ENST00000485465 FAM19A2Q8N3H0 131 aa11.89□□□□□ -0.51
CHMP3-207ENST00000485465 KLK12Q9UKR0 248 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms