RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 CBLN2Q8IUK8 224 aa6.72□□□□□ -1.33
CPSF4-213ENST00000484112 TMEM191AQ9H0A3 160 aa6.72□□□□□ -1.33
CPSF4-213ENST00000484112 RPS10P5Q9NQ39 176 aa6.72□□□□□ -1.33
CPSF4-213ENST00000484112 DMBT1Q9UGM3 2413 aaPredicted RBP6.71□□□□□ -1.33
CPSF4-213ENST00000484112 TRAV8-3A0A0A6YYJ7 113 aa6.71□□□□□ -1.34
CPSF4-213ENST00000484112 SMIM27A0A1W2PRY6 76 aa6.71□□□□□ -1.34
CPSF4-213ENST00000484112 S100A8P05109 93 aa6.71□□□□□ -1.34
CPSF4-213ENST00000484112 NIT1Q86X76 327 aa6.71□□□□□ -1.34
CPSF4-213ENST00000484112 NUP35Q8NFH5 326 aa6.71□□□□□ -1.34
CPSF4-213ENST00000484112 YPEL4Q96NS1 127 aa6.71□□□□□ -1.34
CPSF4-213ENST00000484112 CTDSP1Q9GZU7 261 aa6.71□□□□□ -1.34
CPSF4-213ENST00000484112 COX11Q9Y6N1 276 aa6.71□□□□□ -1.34
CPSF4-213ENST00000484112 TRBV25-1A0A075B6N4 114 aa6.7□□□□□ -1.34
CPSF4-213ENST00000484112 A0A087WX48 190 aa6.7□□□□□ -1.34
CPSF4-213ENST00000484112 COLCA2A8K830 154 aa6.7□□□□□ -1.34
CPSF4-213ENST00000484112 PPP1R17O96001 155 aa6.7□□□□□ -1.34
CPSF4-213ENST00000484112 IQCJQ1A5X6 159 aa6.7□□□□□ -1.34
CPSF4-213ENST00000484112 ANAPC16Q96DE5 110 aa6.7□□□□□ -1.34
CPSF4-213ENST00000484112 MRAP2Q96G30 205 aa6.7□□□□□ -1.34
CPSF4-213ENST00000484112 TM2D2Q9BX73 214 aa6.7□□□□□ -1.34
CPSF4-213ENST00000484112 NCR2O95944 276 aa6.69□□□□□ -1.34
CPSF4-213ENST00000484112 MT-ND4LP03901 98 aa6.69□□□□□ -1.34
CPSF4-213ENST00000484112 GATD1Q8NB37 220 aa6.69□□□□□ -1.34
CPSF4-213ENST00000484112 RMI2Q96E14 147 aa6.69□□□□□ -1.34
CPSF4-213ENST00000484112 IGLV5-52A0A0A0MRZ9 124 aa6.68□□□□□ -1.34
CPSF4-213ENST00000484112 IGHV1-24A0A0C4DH33 117 aa6.68□□□□□ -1.34
CPSF4-213ENST00000484112 TRBV6-5A0A0K0K1A5 114 aa6.68□□□□□ -1.34
CPSF4-213ENST00000484112 IGHV3-30P01768 117 aa6.68□□□□□ -1.34
CPSF4-213ENST00000484112 IGHV3-33P01772 117 aa6.68□□□□□ -1.34
CPSF4-213ENST00000484112 IGHV3-30-3P0DP02 117 aa6.68□□□□□ -1.34
CPSF4-213ENST00000484112 IGHV3-30-5P0DP03 117 aa6.68□□□□□ -1.34
CPSF4-213ENST00000484112 Q0VG73 95 aa6.68□□□□□ -1.34
CPSF4-213ENST00000484112 ATP5L2Q7Z4Y8 100 aa6.68□□□□□ -1.34
CPSF4-213ENST00000484112 TMA7Q9Y2S6 64 aaKnown RBP6.68□□□□□ -1.34
CPSF4-213ENST00000484112 FLG2Q5D862 2391 aaPredicted RBP6.68□□□□□ -1.34
CPSF4-213ENST00000484112 MYCBP2O75592 4640 aa6.67□□□□□ -1.34
CPSF4-213ENST00000484112 RAB4AP20338 218 aa6.67□□□□□ -1.34
CPSF4-213ENST00000484112 COTL1Q14019 142 aa6.67□□□□□ -1.34
CPSF4-213ENST00000484112 NTM-AS1Q6ZSK4 140 aa6.67□□□□□ -1.34
CPSF4-213ENST00000484112 CHCHD5Q9BSY4 110 aa6.67□□□□□ -1.34
CPSF4-213ENST00000484112 TRBV24-1A0A075B6N3 115 aa6.66□□□□□ -1.34
CPSF4-213ENST00000484112 A0A1B0GUV1 79 aa6.66□□□□□ -1.34
CPSF4-213ENST00000484112 TMEM262E9PQX1 116 aa6.66□□□□□ -1.34
CPSF4-213ENST00000484112 H7C423 109 aa6.66□□□□□ -1.34
CPSF4-213ENST00000484112 PSCAO43653 123 aa6.66□□□□□ -1.34
CPSF4-213ENST00000484112 IMMP2LQ96T52 175 aa6.66□□□□□ -1.34
CPSF4-213ENST00000484112 TMEM243Q9BU79 118 aa6.66□□□□□ -1.34
CPSF4-213ENST00000484112 TRAV26-2A0A0B4J265 109 aa6.65□□□□□ -1.34
CPSF4-213ENST00000484112 SDHAF1A6NFY7 115 aa6.65□□□□□ -1.34
CPSF4-213ENST00000484112 I3L3M4 83 aa6.65□□□□□ -1.34
CPSF4-213ENST00000484112 RAB5AP20339 215 aa6.65□□□□□ -1.34
CPSF4-213ENST00000484112 HBBP68871 147 aa6.65□□□□□ -1.34
CPSF4-213ENST00000484112 FAM104BQ5XKR9 115 aa6.65□□□□□ -1.34
CPSF4-213ENST00000484112 RNF185Q96GF1 192 aa6.65□□□□□ -1.34
CPSF4-213ENST00000484112 ST20Q9HBF5 79 aa6.65□□□□□ -1.34
CPSF4-213ENST00000484112 TRBV27A0A0K0K1C4 114 aa6.64□□□□□ -1.35
CPSF4-213ENST00000484112 A0A1B0GXF2 115 aa6.64□□□□□ -1.35
CPSF4-213ENST00000484112 UBE2L6O14933 153 aa6.64□□□□□ -1.35
CPSF4-213ENST00000484112 TCAPO15273 167 aa6.64□□□□□ -1.35
CPSF4-213ENST00000484112 CRPP02741 224 aa6.64□□□□□ -1.35
CPSF4-213ENST00000484112 PPBPP02775 128 aa6.64□□□□□ -1.35
CPSF4-213ENST00000484112 AMTP48728 403 aa6.64□□□□□ -1.35
CPSF4-213ENST00000484112 MIAQ16674 131 aa6.64□□□□□ -1.35
CPSF4-213ENST00000484112 MPV17L2Q567V2 206 aa6.64□□□□□ -1.35
CPSF4-213ENST00000484112 AMN1Q8IY45 258 aa6.64□□□□□ -1.35
CPSF4-213ENST00000484112 TMEM70Q9BUB7 260 aa6.64□□□□□ -1.35
CPSF4-213ENST00000484112 PRR34Q9NV39 138 aa6.64□□□□□ -1.35
CPSF4-213ENST00000484112 KLK12Q9UKR0 248 aa6.64□□□□□ -1.35
CPSF4-213ENST00000484112 TRAV9-1A0A075B6T8 112 aa6.63□□□□□ -1.35
CPSF4-213ENST00000484112 LOC105371267A0A1B0GV96 52 aa6.63□□□□□ -1.35
CPSF4-213ENST00000484112 VCYO14598 125 aa6.63□□□□□ -1.35
CPSF4-213ENST00000484112 PHOX2AO14813 284 aa6.63□□□□□ -1.35
CPSF4-213ENST00000484112 APCSP02743 223 aa6.63□□□□□ -1.35
CPSF4-213ENST00000484112 ANGP03950 147 aaKnown RBP6.63□□□□□ -1.35
CPSF4-213ENST00000484112 CAMPP49913 170 aa6.63□□□□□ -1.35
CPSF4-213ENST00000484112 POLR2KP53803 58 aaKnown RBP6.63□□□□□ -1.35
CPSF4-213ENST00000484112 RBX1P62877 108 aa6.63□□□□□ -1.35
CPSF4-213ENST00000484112 RPL32P62910 135 aaKnown RBP6.63□□□□□ -1.35
CPSF4-213ENST00000484112 NTN5Q8WTR8 489 aaPredicted RBP6.63□□□□□ -1.35
CPSF4-213ENST00000484112 RPL39LQ96EH5 51 aaKnown RBP6.63□□□□□ -1.35
CPSF4-213ENST00000484112 BTF3L4Q96K17 158 aa6.63□□□□□ -1.35
CPSF4-213ENST00000484112 C20orf78Q9BR46 151 aa6.63□□□□□ -1.35
CPSF4-213ENST00000484112 Q9HAA7 133 aa6.63□□□□□ -1.35
CPSF4-213ENST00000484112 FAM30AQ9NZY2 134 aa6.63□□□□□ -1.35
CPSF4-213ENST00000484112 VPS13BQ7Z7G8 4022 aa6.62□□□□□ -1.35
CPSF4-213ENST00000484112 TRAV8-4A0A0B4J246 113 aa6.62□□□□□ -1.35
CPSF4-213ENST00000484112 LRCOL1A6NCL2 159 aa6.62□□□□□ -1.35
CPSF4-213ENST00000484112 C1orf196B1AJZ1 125 aa6.62□□□□□ -1.35
CPSF4-213ENST00000484112 ZNF25P17030 456 aaPredicted RBP6.62□□□□□ -1.35
CPSF4-213ENST00000484112 PMCHP20382 165 aa6.62□□□□□ -1.35
CPSF4-213ENST00000484112 S100PP25815 95 aa6.62□□□□□ -1.35
CPSF4-213ENST00000484112 SUMO2P61956 95 aaKnown RBP6.62□□□□□ -1.35
CPSF4-213ENST00000484112 SMAGPQ0VAQ4 97 aa6.62□□□□□ -1.35
CPSF4-213ENST00000484112 MRPL51Q4U2R6 128 aaKnown RBP6.62□□□□□ -1.35
CPSF4-213ENST00000484112 Q8N3U1 123 aa6.62□□□□□ -1.35
CPSF4-213ENST00000484112 UBE2WQ96B02 151 aa6.62□□□□□ -1.35
CPSF4-213ENST00000484112 C1orf43Q9BWL3 253 aa6.62□□□□□ -1.35
CPSF4-213ENST00000484112 PLA2G1BP04054 148 aaKnown RBP6.61□□□□□ -1.35
CPSF4-213ENST00000484112 CKS2P33552 79 aa6.61□□□□□ -1.35
CPSF4-213ENST00000484112 RAB5BP61020 215 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms