RNA–Protein interactions for RNA: ENST00000484077.1

RIF1-210, Transcript of replication timing regulatory factor 1, human

TSL 3

Gene RIF1, Length 782 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RIF1-210	ENST00000484077	KRTAP16-1	A8MUX0	517 aa		4.14	□□□□□ -1.75
RIF1-210	ENST00000484077		K7EN84	100 aa		4.14	□□□□□ -1.75
RIF1-210	ENST00000484077	IGLC6	P0CF74	106 aa		4.14	□□□□□ -1.75
RIF1-210	ENST00000484077	GZMB	P10144	247 aa		4.14	□□□□□ -1.75
RIF1-210	ENST00000484077	CTRL	P40313	264 aa		4.14	□□□□□ -1.75
RIF1-210	ENST00000484077	LINC00315	P59091	139 aa		4.14	□□□□□ -1.75
RIF1-210	ENST00000484077	ADAMTSL4-AS1	Q5T5F5	129 aa		4.14	□□□□□ -1.75
RIF1-210	ENST00000484077	TEX261	Q6UWH6	196 aa		4.14	□□□□□ -1.75
RIF1-210	ENST00000484077	C14orf178	Q8N769	122 aa	Predicted RBP	4.14	□□□□□ -1.75
RIF1-210	ENST00000484077	FER1L6-AS1	Q8NA97	138 aa		4.14	□□□□□ -1.75
RIF1-210	ENST00000484077	SMIM7	Q9BQ49	75 aa		4.14	□□□□□ -1.75
RIF1-210	ENST00000484077	EIF5A2	Q9GZV4	153 aa	Known RBP	4.14	□□□□□ -1.75
RIF1-210	ENST00000484077	RPP21	Q9H633	154 aa	Known RBP	4.14	□□□□□ -1.75
RIF1-210	ENST00000484077	LY96	Q9Y6Y9	160 aa		4.14	□□□□□ -1.75
RIF1-210	ENST00000484077	NDUFS6	O75380	124 aa	Known RBP	4.13	□□□□□ -1.75
RIF1-210	ENST00000484077	CRYGD	P07320	174 aa		4.13	□□□□□ -1.75
RIF1-210	ENST00000484077	MGP	P08493	103 aa		4.13	□□□□□ -1.75
RIF1-210	ENST00000484077	DNAH10OS	P0CZ25	163 aa		4.13	□□□□□ -1.75
RIF1-210	ENST00000484077	SMIM17	P0DL12	118 aa		4.13	□□□□□ -1.75
RIF1-210	ENST00000484077	SNRPE	P62304	92 aa	Known RBP	4.13	□□□□□ -1.75
RIF1-210	ENST00000484077	OR10J3	Q5JRS4	329 aa		4.13	□□□□□ -1.75
RIF1-210	ENST00000484077	LELP1	Q5T871	98 aa		4.13	□□□□□ -1.75
RIF1-210	ENST00000484077	ATP6V0E2	Q8NHE4	81 aa		4.13	□□□□□ -1.75
RIF1-210	ENST00000484077	RNASE7	Q9H1E1	156 aa	Known RBP	4.13	□□□□□ -1.75
RIF1-210	ENST00000484077	PYGO1	Q9Y3Y4	419 aa		4.13	□□□□□ -1.75
RIF1-210	ENST00000484077	DNAH11	Q96DT5	4516 aa		4.13	□□□□□ -1.75
RIF1-210	ENST00000484077	IGLV9-49	A0A0B4J1Y8	123 aa		4.12	□□□□□ -1.75
RIF1-210	ENST00000484077	TRAV8-6	A0A0B4J262	113 aa		4.12	□□□□□ -1.75
RIF1-210	ENST00000484077	TRBV10-1	A0A0K0K1A3	114 aa		4.12	□□□□□ -1.75
RIF1-210	ENST00000484077	ZNF727	A8MUV8	499 aa		4.12	□□□□□ -1.75
RIF1-210	ENST00000484077		H7C423	109 aa		4.12	□□□□□ -1.75
RIF1-210	ENST00000484077	SRP19	P09132	144 aa	Known RBP	4.12	□□□□□ -1.75
RIF1-210	ENST00000484077	TRGC1	P0CF51	173 aa		4.12	□□□□□ -1.75
RIF1-210	ENST00000484077	EVI2A	P22794	236 aa		4.12	□□□□□ -1.75
RIF1-210	ENST00000484077	RAB4B	P61018	213 aa		4.12	□□□□□ -1.75
RIF1-210	ENST00000484077	SST	P61278	116 aa		4.12	□□□□□ -1.75
RIF1-210	ENST00000484077	CACNG7	P62955	275 aa		4.12	□□□□□ -1.75
RIF1-210	ENST00000484077	LINC01556	Q5JQF7	62 aa		4.12	□□□□□ -1.75
RIF1-210	ENST00000484077	C10orf126	Q8N4M7	172 aa		4.12	□□□□□ -1.75
RIF1-210	ENST00000484077	GTSF1L	Q9H1H1	148 aa		4.12	□□□□□ -1.75
RIF1-210	ENST00000484077	TRAV9-2	A0A087WT02	112 aa		4.11	□□□□□ -1.75
RIF1-210	ENST00000484077	IGHV3-38	A0A0C4DH36	116 aa		4.11	□□□□□ -1.75
RIF1-210	ENST00000484077	KRTAP9-6	A8MVA2	160 aa		4.11	□□□□□ -1.75
RIF1-210	ENST00000484077		F2Z2F3	143 aa		4.11	□□□□□ -1.75
RIF1-210	ENST00000484077		K7EP13	123 aa		4.11	□□□□□ -1.75
RIF1-210	ENST00000484077	GATC	O43716	136 aa	Known RBP	4.11	□□□□□ -1.75
RIF1-210	ENST00000484077	UBE2D3	P61077	147 aa		4.11	□□□□□ -1.75
RIF1-210	ENST00000484077	UBE2D2	P62837	147 aa		4.11	□□□□□ -1.75
RIF1-210	ENST00000484077	LYZL1	Q6UWQ5	148 aa		4.11	□□□□□ -1.75
RIF1-210	ENST00000484077	FAM231D	Q6ZW35	169 aa		4.11	□□□□□ -1.75
RIF1-210	ENST00000484077	LINC01551	Q86U37	167 aa		4.11	□□□□□ -1.75
RIF1-210	ENST00000484077	OR10G8	Q8NGN5	311 aa		4.11	□□□□□ -1.75
RIF1-210	ENST00000484077	OCC1	Q8TAD7	63 aa		4.11	□□□□□ -1.75
RIF1-210	ENST00000484077	CNFN	Q9BYD5	112 aa		4.11	□□□□□ -1.75
RIF1-210	ENST00000484077		Q9UF83	564 aa		4.11	□□□□□ -1.75
RIF1-210	ENST00000484077	DYNC1H1	Q14204	4646 aa	Known RBP	4.1	□□□□□ -1.75
RIF1-210	ENST00000484077	TRBV7-3	A0A075B6L6	115 aa		4.1	□□□□□ -1.75
RIF1-210	ENST00000484077		A0A087WWC5	75 aa		4.1	□□□□□ -1.75
RIF1-210	ENST00000484077		H7C1H1	209 aa		4.1	□□□□□ -1.75
RIF1-210	ENST00000484077	IGHV3-30	P01768	117 aa		4.1	□□□□□ -1.75
RIF1-210	ENST00000484077	IGHV3-33	P01772	117 aa		4.1	□□□□□ -1.75
RIF1-210	ENST00000484077	IGHV3-30-3	P0DP02	117 aa		4.1	□□□□□ -1.75
RIF1-210	ENST00000484077	IGHV3-30-5	P0DP03	117 aa		4.1	□□□□□ -1.75
RIF1-210	ENST00000484077	LAGE3	Q14657	143 aa		4.1	□□□□□ -1.75
RIF1-210	ENST00000484077	ADIRF	Q15847	76 aa		4.1	□□□□□ -1.75
RIF1-210	ENST00000484077		Q6ZRN7	208 aa	Predicted RBP	4.1	□□□□□ -1.75
RIF1-210	ENST00000484077	GTSF1	Q8WW33	167 aa		4.1	□□□□□ -1.75
RIF1-210	ENST00000484077	BORCS7	Q96B45	105 aa		4.1	□□□□□ -1.75
RIF1-210	ENST00000484077	DPH3P1	Q9H4G8	78 aa		4.1	□□□□□ -1.75
RIF1-210	ENST00000484077	KIF25-AS1	Q9Y6Z4	181 aa		4.1	□□□□□ -1.75
RIF1-210	ENST00000484077	DNAH5	Q8TE73	4624 aa		4.1	□□□□□ -1.75
RIF1-210	ENST00000484077		A8MWL6	223 aa		4.09	□□□□□ -1.75
RIF1-210	ENST00000484077	RPL23	P62829	140 aa	Known RBP	4.09	□□□□□ -1.75
RIF1-210	ENST00000484077	PEA15	Q15121	130 aa		4.09	□□□□□ -1.75
RIF1-210	ENST00000484077	FAM74A3	Q4VXF1	159 aa		4.09	□□□□□ -1.75
RIF1-210	ENST00000484077	SMIM15	Q7Z3B0	74 aa		4.09	□□□□□ -1.75
RIF1-210	ENST00000484077	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	4.09	□□□□□ -1.75
RIF1-210	ENST00000484077	ISOC2	Q96AB3	205 aa		4.09	□□□□□ -1.75
RIF1-210	ENST00000484077	SMDT1	Q9H4I9	107 aa		4.09	□□□□□ -1.75
RIF1-210	ENST00000484077		Q9HAA7	133 aa		4.09	□□□□□ -1.75
RIF1-210	ENST00000484077	NAT8	Q9UHE5	227 aa		4.09	□□□□□ -1.75
RIF1-210	ENST00000484077	URGCP-MRPS24	S4R325	110 aa		4.09	□□□□□ -1.75
RIF1-210	ENST00000484077	HIGD1C	A8MV81	97 aa		4.08	□□□□□ -1.76
RIF1-210	ENST00000484077	IBA57-AS1	B1ANH7	110 aa		4.08	□□□□□ -1.76
RIF1-210	ENST00000484077		C9JQL5	133 aa		4.08	□□□□□ -1.76
RIF1-210	ENST00000484077		M0QY20	66 aa		4.08	□□□□□ -1.76
RIF1-210	ENST00000484077	PSCA	O43653	123 aa		4.08	□□□□□ -1.76
RIF1-210	ENST00000484077	NTF3	P20783	257 aa		4.08	□□□□□ -1.76
RIF1-210	ENST00000484077	RAB14	P61106	215 aa		4.08	□□□□□ -1.76
RIF1-210	ENST00000484077	TMEM97	Q5BJF2	176 aa		4.08	□□□□□ -1.76
RIF1-210	ENST00000484077	KCNIP4	Q6PIL6	250 aa		4.08	□□□□□ -1.76
RIF1-210	ENST00000484077	RASL11A	Q6T310	242 aa		4.08	□□□□□ -1.76
RIF1-210	ENST00000484077	NIT1	Q86X76	327 aa		4.08	□□□□□ -1.76
RIF1-210	ENST00000484077	C15orf54	Q8N8G6	183 aa		4.08	□□□□□ -1.76
RIF1-210	ENST00000484077	TSKU	Q8WUA8	353 aa		4.08	□□□□□ -1.76
RIF1-210	ENST00000484077	PGLYRP4	Q96LB8	373 aa		4.08	□□□□□ -1.76
RIF1-210	ENST00000484077	DNAJC30	Q96LL9	226 aa		4.08	□□□□□ -1.76
RIF1-210	ENST00000484077	CHCHD7	Q9BUK0	85 aa		4.08	□□□□□ -1.76
RIF1-210	ENST00000484077	OSTC	Q9NRP0	149 aa		4.08	□□□□□ -1.76
RIF1-210	ENST00000484077	IGLV7-46	A0A075B6I9	117 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms