RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 RAB5CP51148 216 aa3.83□□□□□ -1.8
SEMA3D-204ENST00000484038 PEA15Q15121 130 aa3.83□□□□□ -1.8
SEMA3D-204ENST00000484038 FAM74A4Q5TZK3 123 aa3.83□□□□□ -1.8
SEMA3D-204ENST00000484038 ZFP2Q6ZN57 461 aa3.83□□□□□ -1.8
SEMA3D-204ENST00000484038 OR10G9Q8NGN4 311 aa3.83□□□□□ -1.8
SEMA3D-204ENST00000484038 ZC2HC1AQ96GY0 325 aa3.83□□□□□ -1.8
SEMA3D-204ENST00000484038 LINC00479Q96M42 142 aa3.83□□□□□ -1.8
SEMA3D-204ENST00000484038 CHTOPQ9Y3Y2 248 aaKnown RBP3.83□□□□□ -1.8
SEMA3D-204ENST00000484038 TMEM262E9PQX1 116 aa3.82□□□□□ -1.8
SEMA3D-204ENST00000484038 PANO1I0J062 215 aa3.82□□□□□ -1.8
SEMA3D-204ENST00000484038 HMGB3O15347 200 aaKnown RBP3.82□□□□□ -1.8
SEMA3D-204ENST00000484038 SNAPINO95295 136 aa3.82□□□□□ -1.8
SEMA3D-204ENST00000484038 Q0VG73 95 aa3.82□□□□□ -1.8
SEMA3D-204ENST00000484038 AKR1C8PQ5T2L2 129 aa3.82□□□□□ -1.8
SEMA3D-204ENST00000484038 C15orf54Q8N8G6 183 aa3.82□□□□□ -1.8
SEMA3D-204ENST00000484038 SCGB1C1Q8TD33 95 aa3.82□□□□□ -1.8
SEMA3D-204ENST00000484038 PTH2Q96A98 100 aa3.82□□□□□ -1.8
SEMA3D-204ENST00000484038 CHCHD7Q9BUK0 85 aa3.82□□□□□ -1.8
SEMA3D-204ENST00000484038 JPT2Q9H910 190 aa3.82□□□□□ -1.8
SEMA3D-204ENST00000484038 A0A1W2PPV4 95 aa3.81□□□□□ -1.8
SEMA3D-204ENST00000484038 UMAD1C9J7I0 102 aa3.81□□□□□ -1.8
SEMA3D-204ENST00000484038 K7EQM0 130 aa3.81□□□□□ -1.8
SEMA3D-204ENST00000484038 M0R036 132 aa3.81□□□□□ -1.8
SEMA3D-204ENST00000484038 ANGP03950 147 aaKnown RBP3.81□□□□□ -1.8
SEMA3D-204ENST00000484038 CEBPGP53567 150 aa3.81□□□□□ -1.8
SEMA3D-204ENST00000484038 ZNF726P1Q15940 193 aa3.81□□□□□ -1.8
SEMA3D-204ENST00000484038 MAJINQ3KP22 176 aa3.81□□□□□ -1.8
SEMA3D-204ENST00000484038 ENHOQ6UWT2 76 aa3.81□□□□□ -1.8
SEMA3D-204ENST00000484038 PRNTQ86SH4 94 aa3.81□□□□□ -1.8
SEMA3D-204ENST00000484038 SFT2D1Q8WV19 159 aa3.81□□□□□ -1.8
SEMA3D-204ENST00000484038 SERTM2A0A1B0GWG4 89 aa3.8□□□□□ -1.8
SEMA3D-204ENST00000484038 C7orf77A4D0Y5 90 aa3.8□□□□□ -1.8
SEMA3D-204ENST00000484038 H3BVH4 76 aa3.8□□□□□ -1.8
SEMA3D-204ENST00000484038 TCRAP04437 139 aa3.8□□□□□ -1.8
SEMA3D-204ENST00000484038 SRP19P09132 144 aaKnown RBP3.8□□□□□ -1.8
SEMA3D-204ENST00000484038 RAB2AP61019 212 aa3.8□□□□□ -1.8
SEMA3D-204ENST00000484038 MPV17L2Q567V2 206 aa3.8□□□□□ -1.8
SEMA3D-204ENST00000484038 UFSP1Q6NVU6 142 aa3.8□□□□□ -1.8
SEMA3D-204ENST00000484038 CLPSL2Q6UWE3 100 aa3.8□□□□□ -1.8
SEMA3D-204ENST00000484038 C9orf163Q8N9P6 203 aa3.8□□□□□ -1.8
SEMA3D-204ENST00000484038 C5orf17Q8NAS9 161 aa3.8□□□□□ -1.8
SEMA3D-204ENST00000484038 OR10G7Q8NGN6 311 aa3.8□□□□□ -1.8
SEMA3D-204ENST00000484038 DPH3Q96FX2 82 aa3.8□□□□□ -1.8
SEMA3D-204ENST00000484038 RPS10P5Q9NQ39 176 aa3.8□□□□□ -1.8
SEMA3D-204ENST00000484038 GNG13Q9P2W3 67 aa3.8□□□□□ -1.8
SEMA3D-204ENST00000484038 PSG8Q9UQ74 426 aa3.8□□□□□ -1.8
SEMA3D-204ENST00000484038 TNXBP22105 4242 aa3.8□□□□□ -1.8
SEMA3D-204ENST00000484038 IGKV3D-20A0A0C4DH25 116 aa3.8□□□□□ -1.8
SEMA3D-204ENST00000484038 CHTF8P0CG12 524 aa3.8□□□□□ -1.8
SEMA3D-204ENST00000484038 ARL14EPLP0DKL9 152 aa3.8□□□□□ -1.8
SEMA3D-204ENST00000484038 RPL19P84098 196 aaKnown RBP3.8□□□□□ -1.8
SEMA3D-204ENST00000484038 FLI1Q01543 452 aaPredicted RBP3.8□□□□□ -1.8
SEMA3D-204ENST00000484038 SDIM1Q6ZPB5 146 aa3.8□□□□□ -1.8
SEMA3D-204ENST00000484038 ZFP82Q8N141 532 aa3.8□□□□□ -1.8
SEMA3D-204ENST00000484038 ISOC2Q96AB3 205 aa3.8□□□□□ -1.8
SEMA3D-204ENST00000484038 TRBV7-3A0A075B6L6 115 aa3.79□□□□□ -1.8
SEMA3D-204ENST00000484038 COLCA2A8K830 154 aa3.79□□□□□ -1.8
SEMA3D-204ENST00000484038 B4DEV8 164 aa3.79□□□□□ -1.8
SEMA3D-204ENST00000484038 M0R381 172 aa3.79□□□□□ -1.8
SEMA3D-204ENST00000484038 PHOX2AO14813 284 aa3.79□□□□□ -1.8
SEMA3D-204ENST00000484038 UBE2D3P61077 147 aa3.79□□□□□ -1.8
SEMA3D-204ENST00000484038 SNRPEP62304 92 aaKnown RBP3.79□□□□□ -1.8
SEMA3D-204ENST00000484038 UBE2D2P62837 147 aa3.79□□□□□ -1.8
SEMA3D-204ENST00000484038 MIAQ16674 131 aa3.79□□□□□ -1.8
SEMA3D-204ENST00000484038 SAPCD1Q5SSQ6 148 aa3.79□□□□□ -1.8
SEMA3D-204ENST00000484038 MBD3L1Q8WWY6 194 aa3.79□□□□□ -1.8
SEMA3D-204ENST00000484038 CHCHD5Q9BSY4 110 aa3.79□□□□□ -1.8
SEMA3D-204ENST00000484038 PSMG3Q9BT73 122 aaPredicted RBP3.79□□□□□ -1.8
SEMA3D-204ENST00000484038 SMCO4Q9NRQ5 59 aa3.79□□□□□ -1.8
SEMA3D-204ENST00000484038 IL36BQ9NZH7 164 aa3.79□□□□□ -1.8
SEMA3D-204ENST00000484038 IGHV3-64A0A075B6Q5 118 aa3.78□□□□□ -1.8
SEMA3D-204ENST00000484038 TRBV6-8A0A0A6YYG3 113 aa3.78□□□□□ -1.8
SEMA3D-204ENST00000484038 TRBV10-1A0A0K0K1A3 114 aa3.78□□□□□ -1.8
SEMA3D-204ENST00000484038 GRIFINA4D1Z8 144 aa3.78□□□□□ -1.8
SEMA3D-204ENST00000484038 MAP1LC3B2A6NCE7 125 aa3.78□□□□□ -1.8
SEMA3D-204ENST00000484038 FABP5P3A8MUU1 101 aa3.78□□□□□ -1.8
SEMA3D-204ENST00000484038 ZNF727A8MUV8 499 aa3.78□□□□□ -1.8
SEMA3D-204ENST00000484038 S100A9P06702 114 aaKnown RBP3.78□□□□□ -1.8
SEMA3D-204ENST00000484038 ARMS2P0C7Q2 107 aa3.78□□□□□ -1.8
SEMA3D-204ENST00000484038 BCL2P10415 239 aa3.78□□□□□ -1.8
SEMA3D-204ENST00000484038 CDC34P49427 236 aaPredicted RBP3.78□□□□□ -1.8
SEMA3D-204ENST00000484038 SSTP61278 116 aa3.78□□□□□ -1.8
SEMA3D-204ENST00000484038 CIRBPQ14011 172 aaKnown RBP3.78□□□□□ -1.8
SEMA3D-204ENST00000484038 C7orf33Q8WU49 177 aa3.78□□□□□ -1.8
SEMA3D-204ENST00000484038 HIST1H2BAQ96A08 127 aa3.78□□□□□ -1.8
SEMA3D-204ENST00000484038 MAP1LC3BQ9GZQ8 125 aa3.78□□□□□ -1.8
SEMA3D-204ENST00000484038 PHLDA3Q9Y5J5 127 aa3.78□□□□□ -1.8
SEMA3D-204ENST00000484038 IGLV10-54A0A075B6I4 117 aa3.77□□□□□ -1.81
SEMA3D-204ENST00000484038 TRAV1-1A0A0B4J248 108 aa3.77□□□□□ -1.81
SEMA3D-204ENST00000484038 TRAV34A0A0B4J273 112 aa3.77□□□□□ -1.81
SEMA3D-204ENST00000484038 TSHBP01222 138 aa3.77□□□□□ -1.81
SEMA3D-204ENST00000484038 GCHFRP30047 84 aa3.77□□□□□ -1.81
SEMA3D-204ENST00000484038 TAGLN2P37802 199 aaKnown RBP3.77□□□□□ -1.81
SEMA3D-204ENST00000484038 SERF2P84101 59 aa3.77□□□□□ -1.81
SEMA3D-204ENST00000484038 RHEBQ15382 184 aa3.77□□□□□ -1.81
SEMA3D-204ENST00000484038 ZNF56Q15929 161 aa3.77□□□□□ -1.81
SEMA3D-204ENST00000484038 LINC00269Q8N2A0 174 aa3.77□□□□□ -1.81
SEMA3D-204ENST00000484038 SPACA4Q8TDM5 124 aa3.77□□□□□ -1.81
SEMA3D-204ENST00000484038 SFRP2Q96HF1 295 aa3.77□□□□□ -1.81
SEMA3D-204ENST00000484038 LINC01600Q96MT4 127 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms