RNA–Protein interactions for RNA: ENST00000483962.1

SNED1-210, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 2

Gene SNED1, Length 938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-210ENST00000483962 TNFRSF6BO95407 300 aa13.12□□□□□ -0.31
SNED1-210ENST00000483962 NPYP01303 97 aa13.12□□□□□ -0.31
SNED1-210ENST00000483962 PPBPP02775 128 aa13.12□□□□□ -0.31
SNED1-210ENST00000483962 AMTP48728 403 aa13.12□□□□□ -0.31
SNED1-210ENST00000483962 SUMO2P61956 95 aaKnown RBP13.12□□□□□ -0.31
SNED1-210ENST00000483962 GAGE6Q13070 117 aa13.12□□□□□ -0.31
SNED1-210ENST00000483962 TMEM243Q9BU79 118 aa13.12□□□□□ -0.31
SNED1-210ENST00000483962 DNAH17Q9UFH2 4485 aa13.12□□□□□ -0.31
SNED1-210ENST00000483962 A0A087WX48 190 aa13.11□□□□□ -0.31
SNED1-210ENST00000483962 TSHBP01222 138 aa13.11□□□□□ -0.31
SNED1-210ENST00000483962 BTF3P20290 206 aaKnown RBP13.11□□□□□ -0.31
SNED1-210ENST00000483962 MPV17L2Q567V2 206 aa13.11□□□□□ -0.31
SNED1-210ENST00000483962 ORMDL3Q8N138 153 aa13.11□□□□□ -0.31
SNED1-210ENST00000483962 C20orf78Q9BR46 151 aa13.11□□□□□ -0.31
SNED1-210ENST00000483962 ELOBQ15370 118 aa13.1□□□□□ -0.31
SNED1-210ENST00000483962 Q6ZRN7 208 aaPredicted RBP13.1□□□□□ -0.31
SNED1-210ENST00000483962 PRELID3AQ96N28 172 aa13.1□□□□□ -0.31
SNED1-210ENST00000483962 CHCHD7Q9BUK0 85 aa13.1□□□□□ -0.31
SNED1-210ENST00000483962 TGIF2-C20orf24A0A0A6YYL0 155 aa13.09□□□□□ -0.31
SNED1-210ENST00000483962 VCYO14598 125 aa13.09□□□□□ -0.31
SNED1-210ENST00000483962 GNB1LQ9BYB4 327 aa13.09□□□□□ -0.31
SNED1-210ENST00000483962 PHOX2AO14813 284 aa13.08□□□□□ -0.32
SNED1-210ENST00000483962 APCSP02743 223 aa13.08□□□□□ -0.32
SNED1-210ENST00000483962 PKIAP61925 76 aa13.08□□□□□ -0.32
SNED1-210ENST00000483962 RBX1P62877 108 aa13.08□□□□□ -0.32
SNED1-210ENST00000483962 RPL32P62910 135 aaKnown RBP13.08□□□□□ -0.32
SNED1-210ENST00000483962 Q8N976 141 aa13.08□□□□□ -0.32
SNED1-210ENST00000483962 KLK12Q9UKR0 248 aa13.08□□□□□ -0.32
SNED1-210ENST00000483962 HLA-DQA1P01909 254 aa13.07□□□□□ -0.32
SNED1-210ENST00000483962 LAGE3Q14657 143 aa13.07□□□□□ -0.32
SNED1-210ENST00000483962 LINC00336Q6ZUF6 198 aa13.07□□□□□ -0.32
SNED1-210ENST00000483962 YPEL4Q96NS1 127 aa13.07□□□□□ -0.32
SNED1-210ENST00000483962 Q9HAA7 133 aa13.07□□□□□ -0.32
SNED1-210ENST00000483962 FAT2Q9NYQ8 4349 aa13.07□□□□□ -0.32
SNED1-210ENST00000483962 PRSS29PA6NIE9 313 aa13.06□□□□□ -0.32
SNED1-210ENST00000483962 ESDP10768 282 aa13.06□□□□□ -0.32
SNED1-210ENST00000483962 KIAA1644Q3SXP7 199 aa13.06□□□□□ -0.32
SNED1-210ENST00000483962 SMIM2Q9BVW6 85 aa13.06□□□□□ -0.32
SNED1-210ENST00000483962 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.05□□□□□ -0.32
SNED1-210ENST00000483962 IGKV2-29A2NJV5 120 aaPredicted RBP13.05□□□□□ -0.32
SNED1-210ENST00000483962 UBE2L6O14933 153 aa13.05□□□□□ -0.32
SNED1-210ENST00000483962 TNP2Q05952 138 aa13.05□□□□□ -0.32
SNED1-210ENST00000483962 COX19Q49B96 90 aa13.05□□□□□ -0.32
SNED1-210ENST00000483962 NFE4Q86UQ8 179 aa13.05□□□□□ -0.32
SNED1-210ENST00000483962 LAMTOR2Q9Y2Q5 125 aa13.05□□□□□ -0.32
SNED1-210ENST00000483962 IGLV4-60A0A075B6I1 120 aa13.04□□□□□ -0.32
SNED1-210ENST00000483962 CBLN2Q8IUK8 224 aa13.04□□□□□ -0.32
SNED1-210ENST00000483962 A0A1B0GUV1 79 aa13.03□□□□□ -0.32
SNED1-210ENST00000483962 PRSS47A8MTI9 375 aa13.03□□□□□ -0.32
SNED1-210ENST00000483962 ANGP03950 147 aaKnown RBP13.03□□□□□ -0.32
SNED1-210ENST00000483962 FCER1GP30273 86 aa13.03□□□□□ -0.32
SNED1-210ENST00000483962 C20orf203Q8NBC4 194 aa13.03□□□□□ -0.32
SNED1-210ENST00000483962 UBE2WQ96B02 151 aa13.03□□□□□ -0.32
SNED1-210ENST00000483962 KIR2DL4Q99706 377 aa13.03□□□□□ -0.32
SNED1-210ENST00000483962 TRAV8-3A0A0A6YYJ7 113 aa13.02□□□□□ -0.33
SNED1-210ENST00000483962 LOC389332A0A1B0GUA5 103 aa13.02□□□□□ -0.33
SNED1-210ENST00000483962 H7C423 109 aa13.02□□□□□ -0.33
SNED1-210ENST00000483962 MT-ND6P03923 174 aa13.02□□□□□ -0.33
SNED1-210ENST00000483962 ENHOQ6UWT2 76 aa13.02□□□□□ -0.33
SNED1-210ENST00000483962 MRPL18Q9H0U6 180 aaKnown RBP13.02□□□□□ -0.33
SNED1-210ENST00000483962 SMCO4Q9NRQ5 59 aa13.02□□□□□ -0.33
SNED1-210ENST00000483962 MAP1LC3AQ9H492 121 aa13.01□□□□□ -0.33
SNED1-210ENST00000483962 A0A1B0GVY2 172 aa13□□□□□ -0.33
SNED1-210ENST00000483962 TCAPO15273 167 aa13□□□□□ -0.33
SNED1-210ENST00000483962 FGF6P10767 208 aa13□□□□□ -0.33
SNED1-210ENST00000483962 FABP9Q0Z7S8 132 aa13□□□□□ -0.33
SNED1-210ENST00000483962 LINC00269Q8N2A0 174 aa13□□□□□ -0.33
SNED1-210ENST00000483962 PRR34Q9NV39 138 aa13□□□□□ -0.33
SNED1-210ENST00000483962 RNASEKQ6P5S7 137 aaKnown RBP12.99□□□□□ -0.33
SNED1-210ENST00000483962 CLPSL2Q6UWE3 100 aa12.99□□□□□ -0.33
SNED1-210ENST00000483962 ALKBH7Q9BT30 221 aaPredicted RBP12.99□□□□□ -0.33
SNED1-210ENST00000483962 HECTD4Q9Y4D8 3996 aa12.98□□□□□ -0.33
SNED1-210ENST00000483962 AMMECR1LQ6DCA0 310 aa12.98□□□□□ -0.33
SNED1-210ENST00000483962 Q8N8P6 123 aa12.98□□□□□ -0.33
SNED1-210ENST00000483962 PKD1P98161 4303 aa12.97□□□□□ -0.33
SNED1-210ENST00000483962 CRPP02741 224 aa12.97□□□□□ -0.33
SNED1-210ENST00000483962 Q0VG73 95 aa12.97□□□□□ -0.33
SNED1-210ENST00000483962 MRPL52Q86TS9 123 aaKnown RBP12.97□□□□□ -0.33
SNED1-210ENST00000483962 TRAPPC1Q9Y5R8 145 aa12.97□□□□□ -0.33
SNED1-210ENST00000483962 IGKV2D-24A0A075B6R9 120 aa12.96□□□□□ -0.33
SNED1-210ENST00000483962 ZNF25P17030 456 aaPredicted RBP12.96□□□□□ -0.33
SNED1-210ENST00000483962 REG3AQ06141 175 aa12.96□□□□□ -0.33
SNED1-210ENST00000483962 TM2D2Q9BX73 214 aa12.96□□□□□ -0.33
SNED1-210ENST00000483962 PSCAO43653 123 aa12.95□□□□□ -0.34
SNED1-210ENST00000483962 RAB5AP20339 215 aa12.95□□□□□ -0.34
SNED1-210ENST00000483962 IFI27P40305 119 aaPredicted RBP12.95□□□□□ -0.34
SNED1-210ENST00000483962 RPL39P62891 51 aaKnown RBP12.95□□□□□ -0.34
SNED1-210ENST00000483962 MIAQ16674 131 aa12.95□□□□□ -0.34
SNED1-210ENST00000483962 MAPKAPK5-AS1Q8N8E1 139 aa12.95□□□□□ -0.34
SNED1-210ENST00000483962 RMI2Q96E14 147 aa12.94□□□□□ -0.34
SNED1-210ENST00000483962 UBE2D4Q9Y2X8 147 aa12.94□□□□□ -0.34
SNED1-210ENST00000483962 EPPK1P58107 5090 aaKnown RBP12.93□□□□□ -0.34
SNED1-210ENST00000483962 A0A087WTM6 91 aa12.93□□□□□ -0.34
SNED1-210ENST00000483962 LRCOL1A6NCL2 159 aa12.93□□□□□ -0.34
SNED1-210ENST00000483962 OR5A1Q8NGJ0 315 aa12.93□□□□□ -0.34
SNED1-210ENST00000483962 TMEM101Q96IK0 257 aa12.93□□□□□ -0.34
SNED1-210ENST00000483962 NXT2Q9NPJ8 142 aaKnown RBP12.93□□□□□ -0.34
SNED1-210ENST00000483962 DNAH11Q96DT5 4516 aa12.92□□□□□ -0.34
SNED1-210ENST00000483962 SCO1O75880 301 aa12.92□□□□□ -0.34
SNED1-210ENST00000483962 KRTAP26-1Q6PEX3 210 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms