RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 TMEM97Q5BJF2 176 aa3.78□□□□□ -1.8
CSDE1-207ENST00000483407 ENHOQ6UWT2 76 aa3.78□□□□□ -1.8
CSDE1-207ENST00000483407 COX8CQ7Z4L0 72 aa3.78□□□□□ -1.8
CSDE1-207ENST00000483407 OR10G8Q8NGN5 311 aa3.78□□□□□ -1.8
CSDE1-207ENST00000483407 FMC1Q96HJ9 113 aa3.78□□□□□ -1.8
CSDE1-207ENST00000483407 CHCHD5Q9BSY4 110 aa3.78□□□□□ -1.8
CSDE1-207ENST00000483407 FAM74A7A6NL05 159 aa3.77□□□□□ -1.81
CSDE1-207ENST00000483407 SMIM1B2RUZ4 78 aa3.77□□□□□ -1.81
CSDE1-207ENST00000483407 CRIP1P50238 77 aa3.77□□□□□ -1.81
CSDE1-207ENST00000483407 ZNF56Q15929 161 aa3.77□□□□□ -1.81
CSDE1-207ENST00000483407 MPV17L2Q567V2 206 aa3.77□□□□□ -1.81
CSDE1-207ENST00000483407 AKR1C8PQ5T2L2 129 aa3.77□□□□□ -1.81
CSDE1-207ENST00000483407 Q6ZRU5 148 aa3.77□□□□□ -1.81
CSDE1-207ENST00000483407 C9orf163Q8N9P6 203 aa3.77□□□□□ -1.81
CSDE1-207ENST00000483407 INO80EQ8NBZ0 244 aaPredicted RBP3.77□□□□□ -1.81
CSDE1-207ENST00000483407 TCEAL7Q9BRU2 100 aa3.77□□□□□ -1.81
CSDE1-207ENST00000483407 LRP1Q07954 4544 aaKnown RBP3.77□□□□□ -1.81
CSDE1-207ENST00000483407 MUC2Q02817 5179 aa3.76□□□□□ -1.81
CSDE1-207ENST00000483407 DNAH8Q96JB1 4490 aa3.76□□□□□ -1.81
CSDE1-207ENST00000483407 TRBV25-1A0A075B6N4 114 aa3.76□□□□□ -1.81
CSDE1-207ENST00000483407 TRBV6-1A0A0K0K1D8 114 aa3.76□□□□□ -1.81
CSDE1-207ENST00000483407 LTAP01374 205 aa3.76□□□□□ -1.81
CSDE1-207ENST00000483407 PRSS1P07477 247 aa3.76□□□□□ -1.81
CSDE1-207ENST00000483407 AKR1C3P42330 323 aa3.76□□□□□ -1.81
CSDE1-207ENST00000483407 HNRNPA3P51991 378 aaKnown RBP3.76□□□□□ -1.81
CSDE1-207ENST00000483407 SRSF9Q13242 221 aaKnown RBP eCLIP3.76□□□□□ -1.81
CSDE1-207ENST00000483407 ZNF726P1Q15940 193 aa3.76□□□□□ -1.81
CSDE1-207ENST00000483407 SPANXN1Q5VSR9 72 aa3.76□□□□□ -1.81
CSDE1-207ENST00000483407 STOML3Q8TAV4 291 aa3.76□□□□□ -1.81
CSDE1-207ENST00000483407 DPH3Q96FX2 82 aa3.76□□□□□ -1.81
CSDE1-207ENST00000483407 ZNF471Q9BX82 626 aaPredicted RBP3.76□□□□□ -1.81
CSDE1-207ENST00000483407 MED28Q9H204 178 aa3.76□□□□□ -1.81
CSDE1-207ENST00000483407 PRR34Q9NV39 138 aa3.76□□□□□ -1.81
CSDE1-207ENST00000483407 ALG5Q9Y673 324 aa3.76□□□□□ -1.81
CSDE1-207ENST00000483407 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.75□□□□□ -1.81
CSDE1-207ENST00000483407 MAP1LC3B2A6NCE7 125 aa3.75□□□□□ -1.81
CSDE1-207ENST00000483407 S100A9P06702 114 aaKnown RBP3.75□□□□□ -1.81
CSDE1-207ENST00000483407 CXCL1P09341 107 aa3.75□□□□□ -1.81
CSDE1-207ENST00000483407 SMIM17P0DL12 118 aa3.75□□□□□ -1.81
CSDE1-207ENST00000483407 FHITP49789 147 aa3.75□□□□□ -1.81
CSDE1-207ENST00000483407 RBX1P62877 108 aa3.75□□□□□ -1.81
CSDE1-207ENST00000483407 RPL7L1Q6DKI1 246 aaKnown RBP3.75□□□□□ -1.81
CSDE1-207ENST00000483407 CLPSL2Q6UWE3 100 aa3.75□□□□□ -1.81
CSDE1-207ENST00000483407 CD164L2Q6UWJ8 174 aa3.75□□□□□ -1.81
CSDE1-207ENST00000483407 SDIM1Q6ZPB5 146 aa3.75□□□□□ -1.81
CSDE1-207ENST00000483407 LINC00269Q8N2A0 174 aa3.75□□□□□ -1.81
CSDE1-207ENST00000483407 OR10AG1Q8NH19 301 aa3.75□□□□□ -1.81
CSDE1-207ENST00000483407 RNF185Q96GF1 192 aa3.75□□□□□ -1.81
CSDE1-207ENST00000483407 DERL1Q9BUN8 251 aa3.75□□□□□ -1.81
CSDE1-207ENST00000483407 MAP1LC3BQ9GZQ8 125 aa3.75□□□□□ -1.81
CSDE1-207ENST00000483407 DPH3P1Q9H4G8 78 aa3.75□□□□□ -1.81
CSDE1-207ENST00000483407 IGHV3-64A0A075B6Q5 118 aa3.74□□□□□ -1.81
CSDE1-207ENST00000483407 FXYD6-FXYD2A0A087WZ82 144 aa3.74□□□□□ -1.81
CSDE1-207ENST00000483407 TRAV8-4A0A0B4J246 113 aa3.74□□□□□ -1.81
CSDE1-207ENST00000483407 IGHV1-24A0A0C4DH33 117 aa3.74□□□□□ -1.81
CSDE1-207ENST00000483407 SNAI2O43623 268 aa3.74□□□□□ -1.81
CSDE1-207ENST00000483407 P01737 135 aa3.74□□□□□ -1.81
CSDE1-207ENST00000483407 GIPP09681 153 aaPredicted RBP3.74□□□□□ -1.81
CSDE1-207ENST00000483407 MT1HL1P0DM35 61 aa3.74□□□□□ -1.81
CSDE1-207ENST00000483407 LINC01547P58512 204 aaPredicted RBP3.74□□□□□ -1.81
CSDE1-207ENST00000483407 CNBPP62633 177 aaKnown RBP3.74□□□□□ -1.81
CSDE1-207ENST00000483407 REG3AQ06141 175 aa3.74□□□□□ -1.81
CSDE1-207ENST00000483407 IQCJQ1A5X6 159 aa3.74□□□□□ -1.81
CSDE1-207ENST00000483407 NTM-AS1Q6ZSK4 140 aa3.74□□□□□ -1.81
CSDE1-207ENST00000483407 AP1S3Q96PC3 154 aa3.74□□□□□ -1.81
CSDE1-207ENST00000483407 VAX2Q9UIW0 290 aa3.74□□□□□ -1.81
CSDE1-207ENST00000483407 FAT4Q6V0I7 4981 aa3.73□□□□□ -1.81
CSDE1-207ENST00000483407 IGLV10-54A0A075B6I4 117 aa3.73□□□□□ -1.81
CSDE1-207ENST00000483407 MUC21A0A0G2JKD1 596 aa3.73□□□□□ -1.81
CSDE1-207ENST00000483407 MUC21A0A140T8X8 626 aa3.73□□□□□ -1.81
CSDE1-207ENST00000483407 H7C1H1 209 aa3.73□□□□□ -1.81
CSDE1-207ENST00000483407 PANO1I0J062 215 aa3.73□□□□□ -1.81
CSDE1-207ENST00000483407 PFDN1O60925 122 aa3.73□□□□□ -1.81
CSDE1-207ENST00000483407 OR5AL1P0C617 328 aa3.73□□□□□ -1.81
CSDE1-207ENST00000483407 GZMBP10144 247 aa3.73□□□□□ -1.81
CSDE1-207ENST00000483407 SSTP61278 116 aa3.73□□□□□ -1.81
CSDE1-207ENST00000483407 CIRBPQ14011 172 aaKnown RBP3.73□□□□□ -1.81
CSDE1-207ENST00000483407 Q5BKY6 102 aa3.73□□□□□ -1.81
CSDE1-207ENST00000483407 KRTAP26-1Q6PEX3 210 aa3.73□□□□□ -1.81
CSDE1-207ENST00000483407 BAGE2Q86Y30 109 aa3.73□□□□□ -1.81
CSDE1-207ENST00000483407 C7orf33Q8WU49 177 aa3.73□□□□□ -1.81
CSDE1-207ENST00000483407 FAT3Q8TDW7 4589 aa3.72□□□□□ -1.81
CSDE1-207ENST00000483407 A0A087WYN8 130 aa3.72□□□□□ -1.81
CSDE1-207ENST00000483407 MGPP08493 103 aa3.72□□□□□ -1.81
CSDE1-207ENST00000483407 SPACA4Q8TDM5 124 aa3.72□□□□□ -1.81
CSDE1-207ENST00000483407 TMEM243Q9BU79 118 aa3.72□□□□□ -1.81
CSDE1-207ENST00000483407 M0QY20 66 aa3.71□□□□□ -1.82
CSDE1-207ENST00000483407 UBE2L6O14933 153 aa3.71□□□□□ -1.82
CSDE1-207ENST00000483407 CHTF8P0CG12 524 aa3.71□□□□□ -1.82
CSDE1-207ENST00000483407 SULT1A2P50226 295 aa3.71□□□□□ -1.82
CSDE1-207ENST00000483407 RAB5CP51148 216 aa3.71□□□□□ -1.82
CSDE1-207ENST00000483407 NKX2-5P52952 324 aaPredicted RBP3.71□□□□□ -1.82
CSDE1-207ENST00000483407 C20orf203Q8NBC4 194 aa3.71□□□□□ -1.82
CSDE1-207ENST00000483407 SFT2D1Q8WV19 159 aa3.71□□□□□ -1.82
CSDE1-207ENST00000483407 TPPP3Q9BW30 176 aa3.71□□□□□ -1.82
CSDE1-207ENST00000483407 PLAC8Q9NZF1 115 aa3.71□□□□□ -1.82
CSDE1-207ENST00000483407 KIF25-AS1Q9Y6Z4 181 aa3.71□□□□□ -1.82
CSDE1-207ENST00000483407 LRP2P98164 4655 aa3.7□□□□□ -1.82
CSDE1-207ENST00000483407 IGLV4-60A0A075B6I1 120 aa3.7□□□□□ -1.82
CSDE1-207ENST00000483407 A0A087WZ39 114 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms