RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 CTRLP40313 264 aa6.38□□□□□ -1.39
TMEM39A-207ENST00000482162 FOXA3P55318 350 aaPredicted RBP6.38□□□□□ -1.39
TMEM39A-207ENST00000482162 CACNG7P62955 275 aa6.38□□□□□ -1.39
TMEM39A-207ENST00000482162 ENHOQ6UWT2 76 aa6.38□□□□□ -1.39
TMEM39A-207ENST00000482162 NTM-AS1Q6ZSK4 140 aa6.38□□□□□ -1.39
TMEM39A-207ENST00000482162 ATP5L2Q7Z4Y8 100 aa6.38□□□□□ -1.39
TMEM39A-207ENST00000482162 Q8N976 141 aa6.38□□□□□ -1.39
TMEM39A-207ENST00000482162 BAALCQ8WXS3 180 aa6.38□□□□□ -1.39
TMEM39A-207ENST00000482162 RMI2Q96E14 147 aa6.38□□□□□ -1.39
TMEM39A-207ENST00000482162 TPPP3Q9BW30 176 aa6.38□□□□□ -1.39
TMEM39A-207ENST00000482162 URGCP-MRPS24S4R325 110 aa6.38□□□□□ -1.39
TMEM39A-207ENST00000482162 VPS13BQ7Z7G8 4022 aa6.37□□□□□ -1.39
TMEM39A-207ENST00000482162 A0A087WX48 190 aa6.37□□□□□ -1.39
TMEM39A-207ENST00000482162 M0QY20 66 aa6.37□□□□□ -1.39
TMEM39A-207ENST00000482162 S100A8P05109 93 aa6.37□□□□□ -1.39
TMEM39A-207ENST00000482162 GZMBP10144 247 aa6.37□□□□□ -1.39
TMEM39A-207ENST00000482162 SPANXN1Q5VSR9 72 aa6.37□□□□□ -1.39
TMEM39A-207ENST00000482162 WDR73Q6P4I2 378 aa6.37□□□□□ -1.39
TMEM39A-207ENST00000482162 MUC21A0A0G2JKD1 596 aa6.36□□□□□ -1.39
TMEM39A-207ENST00000482162 MUC21A0A140T8X8 626 aa6.36□□□□□ -1.39
TMEM39A-207ENST00000482162 A0A1B0GUT8 65 aa6.36□□□□□ -1.39
TMEM39A-207ENST00000482162 FAM229AH3BQW9 127 aa6.36□□□□□ -1.39
TMEM39A-207ENST00000482162 LECT2O14960 151 aa6.36□□□□□ -1.39
TMEM39A-207ENST00000482162 Q0VG73 95 aa6.36□□□□□ -1.39
TMEM39A-207ENST00000482162 RIGQ13278 110 aa6.36□□□□□ -1.39
TMEM39A-207ENST00000482162 COX19Q49B96 90 aa6.36□□□□□ -1.39
TMEM39A-207ENST00000482162 TMEM97Q5BJF2 176 aa6.36□□□□□ -1.39
TMEM39A-207ENST00000482162 KRTAP26-1Q6PEX3 210 aa6.36□□□□□ -1.39
TMEM39A-207ENST00000482162 RASL11AQ6T310 242 aa6.36□□□□□ -1.39
TMEM39A-207ENST00000482162 LYZL1Q6UWQ5 148 aa6.36□□□□□ -1.39
TMEM39A-207ENST00000482162 CBLN2Q8IUK8 224 aa6.36□□□□□ -1.39
TMEM39A-207ENST00000482162 NUP35Q8NFH5 326 aa6.36□□□□□ -1.39
TMEM39A-207ENST00000482162 GTSF1Q8WW33 167 aa6.36□□□□□ -1.39
TMEM39A-207ENST00000482162 PGLYRP4Q96LB8 373 aa6.36□□□□□ -1.39
TMEM39A-207ENST00000482162 PRR34Q9NV39 138 aa6.36□□□□□ -1.39
TMEM39A-207ENST00000482162 TRBV24-1A0A075B6N3 115 aa6.35□□□□□ -1.39
TMEM39A-207ENST00000482162 HAMPP81172 84 aa6.35□□□□□ -1.39
TMEM39A-207ENST00000482162 ZNF56Q15929 161 aa6.35□□□□□ -1.39
TMEM39A-207ENST00000482162 IQCJQ1A5X6 159 aa6.35□□□□□ -1.39
TMEM39A-207ENST00000482162 MPV17L2Q567V2 206 aa6.35□□□□□ -1.39
TMEM39A-207ENST00000482162 SMIM15Q7Z3B0 74 aa6.35□□□□□ -1.39
TMEM39A-207ENST00000482162 UBE2WQ96B02 151 aa6.35□□□□□ -1.39
TMEM39A-207ENST00000482162 AP1S3Q96PC3 154 aa6.35□□□□□ -1.39
TMEM39A-207ENST00000482162 CNFNQ9BYD5 112 aa6.35□□□□□ -1.39
TMEM39A-207ENST00000482162 IGKV2D-24A0A075B6R9 120 aa6.34□□□□□ -1.39
TMEM39A-207ENST00000482162 F5H697 171 aa6.34□□□□□ -1.39
TMEM39A-207ENST00000482162 SCO1O75880 301 aa6.34□□□□□ -1.39
TMEM39A-207ENST00000482162 TRGC1P0CF51 173 aa6.34□□□□□ -1.39
TMEM39A-207ENST00000482162 PKIAP61925 76 aa6.34□□□□□ -1.39
TMEM39A-207ENST00000482162 HBBP68871 147 aa6.34□□□□□ -1.39
TMEM39A-207ENST00000482162 TWIST1Q15672 202 aa6.34□□□□□ -1.39
TMEM39A-207ENST00000482162 TMEM262E9PQX1 116 aa6.33□□□□□ -1.4
TMEM39A-207ENST00000482162 MT-ND6P03923 174 aa6.33□□□□□ -1.4
TMEM39A-207ENST00000482162 RBX1P62877 108 aa6.33□□□□□ -1.4
TMEM39A-207ENST00000482162 MIAQ16674 131 aa6.33□□□□□ -1.4
TMEM39A-207ENST00000482162 MRPL54Q6P161 138 aaKnown RBP6.33□□□□□ -1.4
TMEM39A-207ENST00000482162 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.32□□□□□ -1.4
TMEM39A-207ENST00000482162 TGIF2-C20orf24A0A0A6YYL0 155 aa6.32□□□□□ -1.4
TMEM39A-207ENST00000482162 A0A1B0GXF2 115 aa6.32□□□□□ -1.4
TMEM39A-207ENST00000482162 H7C1H1 209 aa6.32□□□□□ -1.4
TMEM39A-207ENST00000482162 SMIM17P0DL12 118 aa6.32□□□□□ -1.4
TMEM39A-207ENST00000482162 NTF3P20783 257 aa6.32□□□□□ -1.4
TMEM39A-207ENST00000482162 SMCPP49901 116 aaPredicted RBP6.32□□□□□ -1.4
TMEM39A-207ENST00000482162 KRTAP10-4P60372 401 aaPredicted RBP6.32□□□□□ -1.4
TMEM39A-207ENST00000482162 SSTP61278 116 aa6.32□□□□□ -1.4
TMEM39A-207ENST00000482162 LINC01620Q4KN68 170 aa6.32□□□□□ -1.4
TMEM39A-207ENST00000482162 SUMO4Q6EEV6 95 aa6.32□□□□□ -1.4
TMEM39A-207ENST00000482162 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.32□□□□□ -1.4
TMEM39A-207ENST00000482162 YPEL4Q96NS1 127 aa6.32□□□□□ -1.4
TMEM39A-207ENST00000482162 CHCHD5Q9BSY4 110 aa6.32□□□□□ -1.4
TMEM39A-207ENST00000482162 CHAC1Q9BUX1 264 aa6.32□□□□□ -1.4
TMEM39A-207ENST00000482162 C1orf43Q9BWL3 253 aa6.32□□□□□ -1.4
TMEM39A-207ENST00000482162 MYCBP2O75592 4640 aa6.31□□□□□ -1.4
TMEM39A-207ENST00000482162 TRBV25-1A0A075B6N4 114 aa6.31□□□□□ -1.4
TMEM39A-207ENST00000482162 A0A1B0GUV1 79 aa6.31□□□□□ -1.4
TMEM39A-207ENST00000482162 HLA-DQA1P01909 254 aa6.31□□□□□ -1.4
TMEM39A-207ENST00000482162 ANGP03950 147 aaKnown RBP6.31□□□□□ -1.4
TMEM39A-207ENST00000482162 CAMPP49913 170 aa6.31□□□□□ -1.4
TMEM39A-207ENST00000482162 C14orf177Q52M58 125 aa6.31□□□□□ -1.4
TMEM39A-207ENST00000482162 SCXQ7RTU7 201 aa6.31□□□□□ -1.4
TMEM39A-207ENST00000482162 GATD1Q8NB37 220 aa6.31□□□□□ -1.4
TMEM39A-207ENST00000482162 GNB1LQ9BYB4 327 aa6.31□□□□□ -1.4
TMEM39A-207ENST00000482162 TMEM191AQ9H0A3 160 aa6.31□□□□□ -1.4
TMEM39A-207ENST00000482162 NIT2Q9NQR4 276 aa6.31□□□□□ -1.4
TMEM39A-207ENST00000482162 IGHV1-24A0A0C4DH33 117 aa6.3□□□□□ -1.4
TMEM39A-207ENST00000482162 COLCA2A8K830 154 aa6.3□□□□□ -1.4
TMEM39A-207ENST00000482162 RAB5AP20339 215 aa6.3□□□□□ -1.4
TMEM39A-207ENST00000482162 DGAT2L7PQ6IED9 249 aa6.3□□□□□ -1.4
TMEM39A-207ENST00000482162 C20orf203Q8NBC4 194 aa6.3□□□□□ -1.4
TMEM39A-207ENST00000482162 DPH3P1Q9H4G8 78 aa6.3□□□□□ -1.4
TMEM39A-207ENST00000482162 USP17L23D6RBM5 183 aa6.29□□□□□ -1.4
TMEM39A-207ENST00000482162 PLA2G1BP04054 148 aaKnown RBP6.29□□□□□ -1.4
TMEM39A-207ENST00000482162 PRSS1P07477 247 aa6.29□□□□□ -1.4
TMEM39A-207ENST00000482162 RPS10P46783 165 aaKnown RBP6.29□□□□□ -1.4
TMEM39A-207ENST00000482162 GAGE6Q13070 117 aa6.29□□□□□ -1.4
TMEM39A-207ENST00000482162 TMEM136Q6ZRR5 245 aa6.29□□□□□ -1.4
TMEM39A-207ENST00000482162 LINC00528Q8N1L1 170 aa6.29□□□□□ -1.4
TMEM39A-207ENST00000482162 LINC00269Q8N2A0 174 aa6.29□□□□□ -1.4
TMEM39A-207ENST00000482162 C9orf163Q8N9P6 203 aa6.29□□□□□ -1.4
TMEM39A-207ENST00000482162 CIRBP-AS1Q8TBR5 109 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms