RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 TRBV25-1A0A075B6N4 114 aa5.8□□□□□ -1.48
HLA-B-253ENST00000481849 B5MCH6 92 aa5.8□□□□□ -1.48
HLA-B-253ENST00000481849 RAB5CP51148 216 aa5.8□□□□□ -1.48
HLA-B-253ENST00000481849 RPL37AP61513 92 aaKnown RBP5.8□□□□□ -1.48
HLA-B-253ENST00000481849 PKIAP61925 76 aa5.8□□□□□ -1.48
HLA-B-253ENST00000481849 FOXI1Q12951 378 aa5.8□□□□□ -1.48
HLA-B-253ENST00000481849 ZNF345Q14585 488 aa5.8□□□□□ -1.48
HLA-B-253ENST00000481849 OR2D3Q8NGH3 330 aa5.8□□□□□ -1.48
HLA-B-253ENST00000481849 IGHV1-24A0A0C4DH33 117 aa5.79□□□□□ -1.48
HLA-B-253ENST00000481849 A0A0D9SG52 128 aa5.79□□□□□ -1.48
HLA-B-253ENST00000481849 RAB19A4D1S5 217 aa5.79□□□□□ -1.48
HLA-B-253ENST00000481849 HNRNPA3P51991 378 aaKnown RBP5.79□□□□□ -1.48
HLA-B-253ENST00000481849 NKX2-5P52952 324 aaPredicted RBP5.79□□□□□ -1.48
HLA-B-253ENST00000481849 TMEM97Q5BJF2 176 aa5.79□□□□□ -1.48
HLA-B-253ENST00000481849 CENPWQ5EE01 88 aa5.79□□□□□ -1.48
HLA-B-253ENST00000481849 SUMO4Q6EEV6 95 aa5.79□□□□□ -1.48
HLA-B-253ENST00000481849 FER1L6-AS1Q8NA97 138 aa5.79□□□□□ -1.48
HLA-B-253ENST00000481849 DAZAP1Q96EP5 407 aaKnown RBP5.79□□□□□ -1.48
HLA-B-253ENST00000481849 VAX2Q9UIW0 290 aa5.79□□□□□ -1.48
HLA-B-253ENST00000481849 HMSDA8MTL9 139 aa5.78□□□□□ -1.48
HLA-B-253ENST00000481849 PANO1I0J062 215 aa5.78□□□□□ -1.48
HLA-B-253ENST00000481849 M0QY20 66 aa5.78□□□□□ -1.48
HLA-B-253ENST00000481849 REG3AQ06141 175 aa5.78□□□□□ -1.48
HLA-B-253ENST00000481849 IQCJQ1A5X6 159 aa5.78□□□□□ -1.48
HLA-B-253ENST00000481849 KRTAP26-1Q6PEX3 210 aa5.78□□□□□ -1.48
HLA-B-253ENST00000481849 MANBALQ9NQG1 85 aa5.78□□□□□ -1.48
HLA-B-253ENST00000481849 PRR34Q9NV39 138 aa5.78□□□□□ -1.48
HLA-B-253ENST00000481849 LRP1Q07954 4544 aaKnown RBP5.77□□□□□ -1.49
HLA-B-253ENST00000481849 hDV102S1A0JD36 115 aa5.77□□□□□ -1.49
HLA-B-253ENST00000481849 OXTP01178 125 aa5.77□□□□□ -1.49
HLA-B-253ENST00000481849 IGLC6P0CF74 106 aa5.77□□□□□ -1.49
HLA-B-253ENST00000481849 RPS20P60866 119 aaKnown RBP5.77□□□□□ -1.49
HLA-B-253ENST00000481849 EIF5AP63241 154 aaKnown RBP5.77□□□□□ -1.49
HLA-B-253ENST00000481849 DGAT2L7PQ6IED9 249 aa5.77□□□□□ -1.49
HLA-B-253ENST00000481849 C9orf163Q8N9P6 203 aa5.77□□□□□ -1.49
HLA-B-253ENST00000481849 DPH3Q96FX2 82 aa5.77□□□□□ -1.49
HLA-B-253ENST00000481849 TMEM243Q9BU79 118 aa5.77□□□□□ -1.49
HLA-B-253ENST00000481849 GFRA4Q9GZZ7 299 aa5.77□□□□□ -1.49
HLA-B-253ENST00000481849 FAT3Q8TDW7 4589 aa5.76□□□□□ -1.49
HLA-B-253ENST00000481849 IGLV4-60A0A075B6I1 120 aa5.76□□□□□ -1.49
HLA-B-253ENST00000481849 IGKV3OR2-268A0A0C4DH90 116 aa5.76□□□□□ -1.49
HLA-B-253ENST00000481849 H7C1H1 209 aa5.76□□□□□ -1.49
HLA-B-253ENST00000481849 P01737 135 aa5.76□□□□□ -1.49
HLA-B-253ENST00000481849 GNG4P50150 75 aa5.76□□□□□ -1.49
HLA-B-253ENST00000481849 CACNG7P62955 275 aa5.76□□□□□ -1.49
HLA-B-253ENST00000481849 LYZL1Q6UWQ5 148 aa5.76□□□□□ -1.49
HLA-B-253ENST00000481849 C20orf203Q8NBC4 194 aa5.76□□□□□ -1.49
HLA-B-253ENST00000481849 C11orf52Q96A22 123 aa5.76□□□□□ -1.49
HLA-B-253ENST00000481849 MED9Q9NWA0 146 aa5.76□□□□□ -1.49
HLA-B-253ENST00000481849 C19orf71A6NCJ1 209 aa5.75□□□□□ -1.49
HLA-B-253ENST00000481849 UBE2L6O14933 153 aa5.75□□□□□ -1.49
HLA-B-253ENST00000481849 IFNA1P01562 189 aa5.75□□□□□ -1.49
HLA-B-253ENST00000481849 CHTF8P0CG12 524 aa5.75□□□□□ -1.49
HLA-B-253ENST00000481849 C21orf62-AS1Q17RA5 79 aa5.75□□□□□ -1.49
HLA-B-253ENST00000481849 RASL11AQ6T310 242 aa5.75□□□□□ -1.49
HLA-B-253ENST00000481849 SDIM1Q6ZPB5 146 aa5.75□□□□□ -1.49
HLA-B-253ENST00000481849 CLRN3Q8NCR9 226 aa5.75□□□□□ -1.49
HLA-B-253ENST00000481849 TRAV26-2A0A0B4J265 109 aa5.74□□□□□ -1.49
HLA-B-253ENST00000481849 XKRY2A2RUG3 117 aa5.74□□□□□ -1.49
HLA-B-253ENST00000481849 TEX46H3BTG2 121 aa5.74□□□□□ -1.49
HLA-B-253ENST00000481849 TRGC1P0CF51 173 aa5.74□□□□□ -1.49
HLA-B-253ENST00000481849 NTF3P20783 257 aa5.74□□□□□ -1.49
HLA-B-253ENST00000481849 AMTP48728 403 aa5.74□□□□□ -1.49
HLA-B-253ENST00000481849 SULT1A2P50226 295 aa5.74□□□□□ -1.49
HLA-B-253ENST00000481849 TWIST1Q15672 202 aa5.74□□□□□ -1.49
HLA-B-253ENST00000481849 DPH3P1Q9H4G8 78 aa5.74□□□□□ -1.49
HLA-B-253ENST00000481849 NIT2Q9NQR4 276 aa5.74□□□□□ -1.49
HLA-B-253ENST00000481849 TRBV20OR9-2A0A075B6H5 130 aa5.73□□□□□ -1.49
HLA-B-253ENST00000481849 IGHV3-64A0A075B6Q5 118 aa5.73□□□□□ -1.49
HLA-B-253ENST00000481849 TRAV8-4A0A0B4J246 113 aa5.73□□□□□ -1.49
HLA-B-253ENST00000481849 TRAV1-1A0A0B4J248 108 aa5.73□□□□□ -1.49
HLA-B-253ENST00000481849 F2Z2F3 143 aa5.73□□□□□ -1.49
HLA-B-253ENST00000481849 CNBPP62633 177 aaKnown RBP5.73□□□□□ -1.49
HLA-B-253ENST00000481849 MEF2BQ02080 365 aaPredicted RBP5.73□□□□□ -1.49
HLA-B-253ENST00000481849 COTL1Q14019 142 aa5.73□□□□□ -1.49
HLA-B-253ENST00000481849 WDR73Q6P4I2 378 aa5.73□□□□□ -1.49
HLA-B-253ENST00000481849 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.72□□□□□ -1.49
HLA-B-253ENST00000481849 A0A1B0GUV1 79 aa5.72□□□□□ -1.49
HLA-B-253ENST00000481849 PDE6DO43924 150 aa5.72□□□□□ -1.49
HLA-B-253ENST00000481849 BCL2P10415 239 aa5.72□□□□□ -1.49
HLA-B-253ENST00000481849 HIGD2BQ4VC39 106 aa5.72□□□□□ -1.49
HLA-B-253ENST00000481849 EIF5AL1Q6IS14 154 aaKnown RBP5.72□□□□□ -1.49
HLA-B-253ENST00000481849 PGLYRP4Q96LB8 373 aa5.72□□□□□ -1.49
HLA-B-253ENST00000481849 RNASE7Q9H1E1 156 aaKnown RBP5.72□□□□□ -1.49
HLA-B-253ENST00000481849 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.71□□□□□ -1.5
HLA-B-253ENST00000481849 A0A087WYN8 130 aa5.71□□□□□ -1.5
HLA-B-253ENST00000481849 IGKV2-29A2NJV5 120 aaPredicted RBP5.71□□□□□ -1.5
HLA-B-253ENST00000481849 CTRLP40313 264 aa5.71□□□□□ -1.5
HLA-B-253ENST00000481849 FOXA3P55318 350 aaPredicted RBP5.71□□□□□ -1.5
HLA-B-253ENST00000481849 AMMECR1LQ6DCA0 310 aa5.71□□□□□ -1.5
HLA-B-253ENST00000481849 RNASEKQ6P5S7 137 aaKnown RBP5.71□□□□□ -1.5
HLA-B-253ENST00000481849 Q6ZNX1 250 aa5.71□□□□□ -1.5
HLA-B-253ENST00000481849 C9orf62Q8N4C0 152 aa5.71□□□□□ -1.5
HLA-B-253ENST00000481849 GATD1Q8NB37 220 aa5.71□□□□□ -1.5
HLA-B-253ENST00000481849 RPL39LQ96EH5 51 aaKnown RBP5.71□□□□□ -1.5
HLA-B-253ENST00000481849 SMIM12Q96EX1 92 aa5.71□□□□□ -1.5
HLA-B-253ENST00000481849 RPP21Q9H633 154 aaKnown RBP5.71□□□□□ -1.5
HLA-B-253ENST00000481849 BIN3Q9NQY0 253 aa5.71□□□□□ -1.5
HLA-B-253ENST00000481849 IGKV2-24A0A0C4DH68 120 aa5.7□□□□□ -1.5
HLA-B-253ENST00000481849 K7EN84 100 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms