RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 TMEM170BQ5T4T1 132 aa13.42□□□□□ -0.26
MRPL28-209ENST00000481453 TRPT1Q86TN4 253 aaKnown RBP13.41□□□□□ -0.26
MRPL28-209ENST00000481453 PRM2P04554 102 aa13.41□□□□□ -0.26
MRPL28-209ENST00000481453 ZNF876PQ49A33 203 aa13.41□□□□□ -0.26
MRPL28-209ENST00000481453 WFDC2Q14508 124 aa13.4□□□□□ -0.26
MRPL28-209ENST00000481453 IGLV1-51P01701 117 aa13.4□□□□□ -0.26
MRPL28-209ENST00000481453 ZNRF2Q8NHG8 242 aa13.4□□□□□ -0.26
MRPL28-209ENST00000481453 PGPEP1Q9NXJ5 209 aa13.4□□□□□ -0.26
MRPL28-209ENST00000481453 RHOHQ15669 191 aa13.39□□□□□ -0.27
MRPL28-209ENST00000481453 MRPL16Q9NX20 251 aaKnown RBP13.39□□□□□ -0.27
MRPL28-209ENST00000481453 HTN1P15515 57 aa13.39□□□□□ -0.27
MRPL28-209ENST00000481453 NDUFA11Q86Y39 141 aa13.38□□□□□ -0.27
MRPL28-209ENST00000481453 LINC00467Q9BRT7 94 aa13.38□□□□□ -0.27
MRPL28-209ENST00000481453 FN1P02751 2386 aaKnown RBP13.38□□□□□ -0.27
MRPL28-209ENST00000481453 NSD1Q96L73 2696 aaPredicted RBP13.38□□□□□ -0.27
MRPL28-209ENST00000481453 A0A0J9YY99 117 aa13.37□□□□□ -0.27
MRPL28-209ENST00000481453 GAGE13Q4V321 117 aa13.37□□□□□ -0.27
MRPL28-209ENST00000481453 UBE2D1P51668 147 aa13.37□□□□□ -0.27
MRPL28-209ENST00000481453 TSPEAR-AS2P59090 65 aa13.37□□□□□ -0.27
MRPL28-209ENST00000481453 OPRPNQ99935 248 aaPredicted RBP13.37□□□□□ -0.27
MRPL28-209ENST00000481453 INSP01308 110 aa13.36□□□□□ -0.27
MRPL28-209ENST00000481453 STHQ8IWL8 128 aa13.36□□□□□ -0.27
MRPL28-209ENST00000481453 SPANXB1Q9NS25 103 aaPredicted RBP13.36□□□□□ -0.27
MRPL28-209ENST00000481453 I3L3M4 83 aa13.36□□□□□ -0.27
MRPL28-209ENST00000481453 P0DMU3 169 aa13.36□□□□□ -0.27
MRPL28-209ENST00000481453 FAM231AP0DMU4 169 aa13.36□□□□□ -0.27
MRPL28-209ENST00000481453 FAM231CP0DMU5 169 aa13.36□□□□□ -0.27
MRPL28-209ENST00000481453 HIVEP1P15822 2718 aa13.35□□□□□ -0.27
MRPL28-209ENST00000481453 MTURNQ8N3F0 131 aa13.35□□□□□ -0.27
MRPL28-209ENST00000481453 C11orf72Q8NBR9 251 aa13.35□□□□□ -0.27
MRPL28-209ENST00000481453 BEAN1Q3B7T3 259 aa13.35□□□□□ -0.27
MRPL28-209ENST00000481453 C20orf203Q8NBC4 194 aa13.35□□□□□ -0.27
MRPL28-209ENST00000481453 LINC01587Q99440 93 aa13.35□□□□□ -0.27
MRPL28-209ENST00000481453 C19orf73Q9NVV2 129 aa13.35□□□□□ -0.27
MRPL28-209ENST00000481453 XCL2Q9UBD3 114 aa13.35□□□□□ -0.27
MRPL28-209ENST00000481453 J3QQQ9 107 aa13.34□□□□□ -0.27
MRPL28-209ENST00000481453 APOMO95445 188 aa13.34□□□□□ -0.27
MRPL28-209ENST00000481453 SH2D6Q7Z4S9 175 aa13.34□□□□□ -0.27
MRPL28-209ENST00000481453 NFE4Q86UQ8 179 aa13.34□□□□□ -0.27
MRPL28-209ENST00000481453 LGALS3P17931 250 aaKnown RBP13.33□□□□□ -0.27
MRPL28-209ENST00000481453 ETDBQ3ZM63 59 aa13.33□□□□□ -0.27
MRPL28-209ENST00000481453 C1orf158Q8N1D5 194 aa13.33□□□□□ -0.27
MRPL28-209ENST00000481453 CRLF1O75462 422 aa13.33□□□□□ -0.28
MRPL28-209ENST00000481453 ZNF415Q09FC8 603 aa13.33□□□□□ -0.28
MRPL28-209ENST00000481453 LINC00482Q8N8I6 264 aa13.33□□□□□ -0.28
MRPL28-209ENST00000481453 SLC25A29Q8N8R3 303 aa13.33□□□□□ -0.28
MRPL28-209ENST00000481453 WFDC10AQ9H1F0 79 aa13.33□□□□□ -0.28
MRPL28-209ENST00000481453 PRO0461Q9UI25 63 aa13.33□□□□□ -0.28
MRPL28-209ENST00000481453 TSPAN13O95857 204 aa13.32□□□□□ -0.28
MRPL28-209ENST00000481453 NIPBLQ6KC79 2804 aaeCLIP13.32□□□□□ -0.28
MRPL28-209ENST00000481453 IGHV3-73A0A0B4J1V6 119 aa13.32□□□□□ -0.28
MRPL28-209ENST00000481453 M0R2P5 195 aa13.32□□□□□ -0.28
MRPL28-209ENST00000481453 FAM110AQ9BQ89 295 aa13.32□□□□□ -0.28
MRPL28-209ENST00000481453 LOC107984156A0A0G2JMH3 177 aa13.31□□□□□ -0.28
MRPL28-209ENST00000481453 J3QR89 54 aa13.31□□□□□ -0.28
MRPL28-209ENST00000481453 IGHV3-30P01768 117 aa13.31□□□□□ -0.28
MRPL28-209ENST00000481453 IGHV3-30-5P0DP03 117 aa13.31□□□□□ -0.28
MRPL28-209ENST00000481453 CMC4P56277 68 aaPredicted RBP13.31□□□□□ -0.28
MRPL28-209ENST00000481453 SFTA2Q6UW10 78 aa13.31□□□□□ -0.28
MRPL28-209ENST00000481453 ARL17AQ8IVW1 177 aa13.31□□□□□ -0.28
MRPL28-209ENST00000481453 PTH2Q96A98 100 aa13.31□□□□□ -0.28
MRPL28-209ENST00000481453 AMELXQ99217 191 aa13.31□□□□□ -0.28
MRPL28-209ENST00000481453 C2CD3Q4AC94 2353 aa13.31□□□□□ -0.28
MRPL28-209ENST00000481453 VCX2Q9H322 139 aa13.31□□□□□ -0.28
MRPL28-209ENST00000481453 TMEM223A0PJW6 202 aa13.3□□□□□ -0.28
MRPL28-209ENST00000481453 GIG44P09565 113 aaPredicted RBP13.3□□□□□ -0.28
MRPL28-209ENST00000481453 AZU1P20160 251 aa13.3□□□□□ -0.28
MRPL28-209ENST00000481453 PIK3CD-AS1Q5SR53 167 aa13.3□□□□□ -0.28
MRPL28-209ENST00000481453 IGLV4-3A0A075B6K6 122 aa13.29□□□□□ -0.28
MRPL28-209ENST00000481453 LEPROTO15243 131 aa13.29□□□□□ -0.28
MRPL28-209ENST00000481453 PF4P02776 101 aa13.29□□□□□ -0.28
MRPL28-209ENST00000481453 NACAE9PAV3 2078 aa13.28□□□□□ -0.28
MRPL28-209ENST00000481453 A0A0J9YXV3 536 aa13.28□□□□□ -0.28
MRPL28-209ENST00000481453 ZNF22P17026 224 aaPredicted RBP13.28□□□□□ -0.28
MRPL28-209ENST00000481453 PSMB2P49721 201 aa13.28□□□□□ -0.28
MRPL28-209ENST00000481453 IGHV3-64A0A075B6Q5 118 aa13.28□□□□□ -0.28
MRPL28-209ENST00000481453 RHODO00212 210 aa13.28□□□□□ -0.28
MRPL28-209ENST00000481453 CFC1BP0CG36 223 aa13.28□□□□□ -0.28
MRPL28-209ENST00000481453 CFC1P0CG37 223 aa13.28□□□□□ -0.28
MRPL28-209ENST00000481453 EDA2RQ9HAV5 297 aa13.28□□□□□ -0.28
MRPL28-209ENST00000481453 IL17DQ8TAD2 202 aa13.27□□□□□ -0.28
MRPL28-209ENST00000481453 SPXQ9BT56 116 aa13.27□□□□□ -0.28
MRPL28-209ENST00000481453 A8MWV9 139 aa13.27□□□□□ -0.29
MRPL28-209ENST00000481453 UBE2D3P61077 147 aa13.27□□□□□ -0.29
MRPL28-209ENST00000481453 UBE2D2P62837 147 aa13.27□□□□□ -0.29
MRPL28-209ENST00000481453 LYRM7Q5U5X0 104 aa13.27□□□□□ -0.29
MRPL28-209ENST00000481453 SPATA3Q8NHX4 192 aa13.27□□□□□ -0.29
MRPL28-209ENST00000481453 TNFRSF18Q9Y5U5 241 aa13.27□□□□□ -0.29
MRPL28-209ENST00000481453 CFAP126Q5VTH2 177 aa13.26□□□□□ -0.29
MRPL28-209ENST00000481453 IGHV3OR16-12A0A075B7B8 117 aa13.25□□□□□ -0.29
MRPL28-209ENST00000481453 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.25□□□□□ -0.29
MRPL28-209ENST00000481453 PYGO1Q9Y3Y4 419 aa13.25□□□□□ -0.29
MRPL28-209ENST00000481453 Q6ZSN1 163 aa13.24□□□□□ -0.29
MRPL28-209ENST00000481453 C10orf126Q8N4M7 172 aa13.24□□□□□ -0.29
MRPL28-209ENST00000481453 RPL35AP18077 110 aaKnown RBP13.24□□□□□ -0.29
MRPL28-209ENST00000481453 PRO1854Q9UHT4 67 aa13.24□□□□□ -0.29
MRPL28-209ENST00000481453 JMJD1CQ15652 2540 aa13.24□□□□□ -0.29
MRPL28-209ENST00000481453 GAGE12HA6NDE8 117 aa13.23□□□□□ -0.29
MRPL28-209ENST00000481453 INSL3P51460 131 aa13.23□□□□□ -0.29
MRPL28-209ENST00000481453 SIGMAR1Q99720 223 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms