RNA–Protein interactions for RNA: ENST00000480989.1

GTF3C2-210, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 4

Gene GTF3C2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-210ENST00000480989 NKX2-5P52952 324 aaPredicted RBP5.8□□□□□ -1.48
GTF3C2-210ENST00000480989 TMEM97Q5BJF2 176 aa5.8□□□□□ -1.48
GTF3C2-210ENST00000480989 STOML3Q8TAV4 291 aa5.8□□□□□ -1.48
GTF3C2-210ENST00000480989 MBD3L1Q8WWY6 194 aa5.8□□□□□ -1.48
GTF3C2-210ENST00000480989 AP1S3Q96PC3 154 aa5.8□□□□□ -1.48
GTF3C2-210ENST00000480989 CHTOPQ9Y3Y2 248 aaKnown RBP5.8□□□□□ -1.48
GTF3C2-210ENST00000480989 A0A096LNI7 61 aa5.79□□□□□ -1.48
GTF3C2-210ENST00000480989 TRAV8-4A0A0B4J246 113 aa5.79□□□□□ -1.48
GTF3C2-210ENST00000480989 ARPC5O15511 151 aa5.79□□□□□ -1.48
GTF3C2-210ENST00000480989 P01737 135 aa5.79□□□□□ -1.48
GTF3C2-210ENST00000480989 MGPP08493 103 aa5.79□□□□□ -1.48
GTF3C2-210ENST00000480989 HIGD2BQ4VC39 106 aa5.79□□□□□ -1.48
GTF3C2-210ENST00000480989 TMEM243Q9BU79 118 aa5.79□□□□□ -1.48
GTF3C2-210ENST00000480989 IGKV2-24A0A0C4DH68 120 aa5.78□□□□□ -1.48
GTF3C2-210ENST00000480989 A0A0J9YXV3 536 aa5.78□□□□□ -1.48
GTF3C2-210ENST00000480989 C19orf71A6NCJ1 209 aa5.78□□□□□ -1.48
GTF3C2-210ENST00000480989 GAGE12HA6NDE8 117 aa5.78□□□□□ -1.48
GTF3C2-210ENST00000480989 S100A9P06702 114 aaKnown RBP5.78□□□□□ -1.48
GTF3C2-210ENST00000480989 RPL35P42766 123 aaKnown RBP5.78□□□□□ -1.48
GTF3C2-210ENST00000480989 CCL20P78556 96 aa5.78□□□□□ -1.48
GTF3C2-210ENST00000480989 RGS21Q2M5E4 152 aa5.78□□□□□ -1.48
GTF3C2-210ENST00000480989 TMUB2Q71RG4 321 aa5.78□□□□□ -1.48
GTF3C2-210ENST00000480989 SFT2D1Q8WV19 159 aa5.78□□□□□ -1.48
GTF3C2-210ENST00000480989 PGLYRP4Q96LB8 373 aa5.78□□□□□ -1.48
GTF3C2-210ENST00000480989 TRBV20OR9-2A0A075B6H5 130 aa5.77□□□□□ -1.49
GTF3C2-210ENST00000480989 SRSF9Q13242 221 aaKnown RBP eCLIP5.77□□□□□ -1.49
GTF3C2-210ENST00000480989 FER1L6-AS1Q8NA97 138 aa5.77□□□□□ -1.49
GTF3C2-210ENST00000480989 LYPD6BQ8NI32 183 aa5.77□□□□□ -1.49
GTF3C2-210ENST00000480989 FAM213BQ8TBF2 198 aa5.77□□□□□ -1.49
GTF3C2-210ENST00000480989 C11orf52Q96A22 123 aa5.77□□□□□ -1.49
GTF3C2-210ENST00000480989 GVQW2A0A096LPI5 108 aaPredicted RBP5.76□□□□□ -1.49
GTF3C2-210ENST00000480989 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.76□□□□□ -1.49
GTF3C2-210ENST00000480989 IGKV3OR2-268A0A0C4DH90 116 aa5.76□□□□□ -1.49
GTF3C2-210ENST00000480989 ATP6V1G1O75348 118 aa5.76□□□□□ -1.49
GTF3C2-210ENST00000480989 NDUFS6O75380 124 aaKnown RBP5.76□□□□□ -1.49
GTF3C2-210ENST00000480989 SMIM17P0DL12 118 aa5.76□□□□□ -1.49
GTF3C2-210ENST00000480989 CENPWQ5EE01 88 aa5.76□□□□□ -1.49
GTF3C2-210ENST00000480989 RASL11AQ6T310 242 aa5.76□□□□□ -1.49
GTF3C2-210ENST00000480989 Q6ZNX1 250 aa5.76□□□□□ -1.49
GTF3C2-210ENST00000480989 STPG4Q8N801 248 aa5.76□□□□□ -1.49
GTF3C2-210ENST00000480989 GTSF1Q8WW33 167 aa5.76□□□□□ -1.49
GTF3C2-210ENST00000480989 LINC00526Q96FQ7 95 aa5.76□□□□□ -1.49
GTF3C2-210ENST00000480989 DPH3Q96FX2 82 aa5.76□□□□□ -1.49
GTF3C2-210ENST00000480989 TPPP3Q9BW30 176 aa5.76□□□□□ -1.49
GTF3C2-210ENST00000480989 TRAV26-2A0A0B4J265 109 aa5.75□□□□□ -1.49
GTF3C2-210ENST00000480989 RAB19A4D1S5 217 aa5.75□□□□□ -1.49
GTF3C2-210ENST00000480989 GAS8-AS1O95177 125 aa5.75□□□□□ -1.49
GTF3C2-210ENST00000480989 MALP21145 153 aa5.75□□□□□ -1.49
GTF3C2-210ENST00000480989 RPS10P46783 165 aaKnown RBP5.75□□□□□ -1.49
GTF3C2-210ENST00000480989 FOXI1Q12951 378 aa5.75□□□□□ -1.49
GTF3C2-210ENST00000480989 LYZL1Q6UWQ5 148 aa5.75□□□□□ -1.49
GTF3C2-210ENST00000480989 KCNRGQ8N5I3 272 aa5.75□□□□□ -1.49
GTF3C2-210ENST00000480989 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.75□□□□□ -1.49
GTF3C2-210ENST00000480989 GATD1Q8NB37 220 aa5.75□□□□□ -1.49
GTF3C2-210ENST00000480989 OR2D3Q8NGH3 330 aa5.75□□□□□ -1.49
GTF3C2-210ENST00000480989 C7orf33Q8WU49 177 aa5.75□□□□□ -1.49
GTF3C2-210ENST00000480989 CHCHD10Q8WYQ3 142 aaPredicted RBP5.75□□□□□ -1.49
GTF3C2-210ENST00000480989 MRPL18Q9H0U6 180 aaKnown RBP5.75□□□□□ -1.49
GTF3C2-210ENST00000480989 NIT2Q9NQR4 276 aa5.75□□□□□ -1.49
GTF3C2-210ENST00000480989 MUC2Q02817 5179 aa5.74□□□□□ -1.49
GTF3C2-210ENST00000480989 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.74□□□□□ -1.49
GTF3C2-210ENST00000480989 IGKV2-29A2NJV5 120 aaPredicted RBP5.74□□□□□ -1.49
GTF3C2-210ENST00000480989 H7C1H1 209 aa5.74□□□□□ -1.49
GTF3C2-210ENST00000480989 NTF3P20783 257 aa5.74□□□□□ -1.49
GTF3C2-210ENST00000480989 CTRLP40313 264 aa5.74□□□□□ -1.49
GTF3C2-210ENST00000480989 AMTP48728 403 aa5.74□□□□□ -1.49
GTF3C2-210ENST00000480989 SULT1A2P50226 295 aa5.74□□□□□ -1.49
GTF3C2-210ENST00000480989 FOXA3P55318 350 aaPredicted RBP5.74□□□□□ -1.49
GTF3C2-210ENST00000480989 RPL39LQ96EH5 51 aaKnown RBP5.74□□□□□ -1.49
GTF3C2-210ENST00000480989 DPH3P1Q9H4G8 78 aa5.74□□□□□ -1.49
GTF3C2-210ENST00000480989 PFDN1O60925 122 aa5.73□□□□□ -1.49
GTF3C2-210ENST00000480989 H2AFB1P0C5Y9 115 aa5.73□□□□□ -1.49
GTF3C2-210ENST00000480989 CACNG7P62955 275 aa5.73□□□□□ -1.49
GTF3C2-210ENST00000480989 ZNF345Q14585 488 aa5.73□□□□□ -1.49
GTF3C2-210ENST00000480989 SPINK6Q6UWN8 80 aa5.73□□□□□ -1.49
GTF3C2-210ENST00000480989 CNFNQ9BYD5 112 aa5.73□□□□□ -1.49
GTF3C2-210ENST00000480989 FAM231BA6NCW3 169 aa5.72□□□□□ -1.49
GTF3C2-210ENST00000480989 UMAD1C9J7I0 102 aa5.72□□□□□ -1.49
GTF3C2-210ENST00000480989 COTL1Q14019 142 aa5.72□□□□□ -1.49
GTF3C2-210ENST00000480989 GNG13Q9P2W3 67 aa5.72□□□□□ -1.49
GTF3C2-210ENST00000480989 K7EN84 100 aa5.71□□□□□ -1.5
GTF3C2-210ENST00000480989 UBE2L6O14933 153 aa5.71□□□□□ -1.5
GTF3C2-210ENST00000480989 BCL2L11O43521 198 aa5.71□□□□□ -1.5
GTF3C2-210ENST00000480989 FGF6P10767 208 aa5.71□□□□□ -1.5
GTF3C2-210ENST00000480989 RPS20P60866 119 aaKnown RBP5.71□□□□□ -1.5
GTF3C2-210ENST00000480989 C9orf62Q8N4C0 152 aa5.71□□□□□ -1.5
GTF3C2-210ENST00000480989 A0A1W2PNN7 141 aa5.7□□□□□ -1.5
GTF3C2-210ENST00000480989 F2Z2F3 143 aa5.7□□□□□ -1.5
GTF3C2-210ENST00000480989 TRGC1P0CF51 173 aa5.7□□□□□ -1.5
GTF3C2-210ENST00000480989 NUDT10Q8NFP7 164 aa5.7□□□□□ -1.5
GTF3C2-210ENST00000480989 NUDT11Q96G61 164 aa5.7□□□□□ -1.5
GTF3C2-210ENST00000480989 MANBALQ9NQG1 85 aa5.7□□□□□ -1.5
GTF3C2-210ENST00000480989 TRAV1-1A0A0B4J248 108 aa5.69□□□□□ -1.5
GTF3C2-210ENST00000480989 LINC00959A0A1B0GUT2 108 aa5.69□□□□□ -1.5
GTF3C2-210ENST00000480989 HMSDA8MTL9 139 aa5.69□□□□□ -1.5
GTF3C2-210ENST00000480989 CCL25O15444 150 aa5.69□□□□□ -1.5
GTF3C2-210ENST00000480989 IFNA1P01562 189 aa5.69□□□□□ -1.5
GTF3C2-210ENST00000480989 ESDP10768 282 aa5.69□□□□□ -1.5
GTF3C2-210ENST00000480989 XCL1P47992 114 aa5.69□□□□□ -1.5
GTF3C2-210ENST00000480989 RNASEKQ6P5S7 137 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms