RNA–Protein interactions for RNA: ENST00000480943.5

VPS50-215, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 801 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-215ENST00000480943 TRAV8-3A0A0A6YYJ7 113 aa4.04□□□□□ -1.76
VPS50-215ENST00000480943 TRAV1-1A0A0B4J248 108 aa4.04□□□□□ -1.76
VPS50-215ENST00000480943 TRBV10-1A0A0K0K1A3 114 aa4.04□□□□□ -1.76
VPS50-215ENST00000480943 RAB19A4D1S5 217 aa4.04□□□□□ -1.76
VPS50-215ENST00000480943 RBFOX3A6NFN3 312 aa4.04□□□□□ -1.76
VPS50-215ENST00000480943 LECT2O14960 151 aa4.04□□□□□ -1.76
VPS50-215ENST00000480943 IFNA1P01562 189 aa4.04□□□□□ -1.76
VPS50-215ENST00000480943 C1QBP02746 253 aa4.04□□□□□ -1.76
VPS50-215ENST00000480943 MGPP08493 103 aa4.04□□□□□ -1.76
VPS50-215ENST00000480943 GZMBP10144 247 aa4.04□□□□□ -1.76
VPS50-215ENST00000480943 XGP55808 180 aa4.04□□□□□ -1.76
VPS50-215ENST00000480943 UBE2D3P61077 147 aa4.04□□□□□ -1.76
VPS50-215ENST00000480943 UBE2D2P62837 147 aa4.04□□□□□ -1.76
VPS50-215ENST00000480943 HAMPP81172 84 aa4.04□□□□□ -1.76
VPS50-215ENST00000480943 MEF2BQ02080 365 aaPredicted RBP4.04□□□□□ -1.76
VPS50-215ENST00000480943 GAGE6Q13070 117 aa4.04□□□□□ -1.76
VPS50-215ENST00000480943 WFDC2Q14508 124 aa4.04□□□□□ -1.76
VPS50-215ENST00000480943 SLC51BQ86UW2 128 aa4.04□□□□□ -1.76
VPS50-215ENST00000480943 NIT1Q86X76 327 aa4.04□□□□□ -1.76
VPS50-215ENST00000480943 Q8N814 137 aa4.04□□□□□ -1.76
VPS50-215ENST00000480943 DNAJC30Q96LL9 226 aa4.04□□□□□ -1.76
VPS50-215ENST00000480943 AP1S3Q96PC3 154 aa4.04□□□□□ -1.76
VPS50-215ENST00000480943 TPPP3Q9BW30 176 aa4.04□□□□□ -1.76
VPS50-215ENST00000480943 MED9Q9NWA0 146 aa4.04□□□□□ -1.76
VPS50-215ENST00000480943 FAT1Q14517 4588 aa4.03□□□□□ -1.76
VPS50-215ENST00000480943 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.03□□□□□ -1.76
VPS50-215ENST00000480943 TRBV7-3A0A075B6L6 115 aa4.03□□□□□ -1.76
VPS50-215ENST00000480943 IGKV2D-24A0A075B6R9 120 aa4.03□□□□□ -1.76
VPS50-215ENST00000480943 A0A087WX48 190 aa4.03□□□□□ -1.76
VPS50-215ENST00000480943 EPM2AB3EWF7 344 aa4.03□□□□□ -1.76
VPS50-215ENST00000480943 IGLV2-8P01709 118 aa4.03□□□□□ -1.76
VPS50-215ENST00000480943 OR5AL1P0C617 328 aa4.03□□□□□ -1.76
VPS50-215ENST00000480943 SMIM17P0DL12 118 aa4.03□□□□□ -1.76
VPS50-215ENST00000480943 BCL2P10415 239 aa4.03□□□□□ -1.76
VPS50-215ENST00000480943 GNG4P50150 75 aa4.03□□□□□ -1.76
VPS50-215ENST00000480943 RAB4BP61018 213 aa4.03□□□□□ -1.76
VPS50-215ENST00000480943 LCE1FQ5T754 118 aa4.03□□□□□ -1.76
VPS50-215ENST00000480943 KCNIP4Q6PIL6 250 aa4.03□□□□□ -1.76
VPS50-215ENST00000480943 AKAP14Q86UN6 197 aa4.03□□□□□ -1.76
VPS50-215ENST00000480943 FER1L6-AS1Q8NA97 138 aa4.03□□□□□ -1.76
VPS50-215ENST00000480943 OR2D3Q8NGH3 330 aa4.03□□□□□ -1.76
VPS50-215ENST00000480943 OR10G8Q8NGN5 311 aa4.03□□□□□ -1.76
VPS50-215ENST00000480943 UBE2WQ96B02 151 aa4.03□□□□□ -1.76
VPS50-215ENST00000480943 KLK12Q9UKR0 248 aa4.03□□□□□ -1.76
VPS50-215ENST00000480943 DNAH8Q96JB1 4490 aa4.02□□□□□ -1.77
VPS50-215ENST00000480943 TRBV20OR9-2A0A075B6H5 130 aa4.02□□□□□ -1.77
VPS50-215ENST00000480943 C19orf71A6NCJ1 209 aa4.02□□□□□ -1.77
VPS50-215ENST00000480943 TMEM262E9PQX1 116 aa4.02□□□□□ -1.77
VPS50-215ENST00000480943 PDE6DO43924 150 aa4.02□□□□□ -1.77
VPS50-215ENST00000480943 P01737 135 aa4.02□□□□□ -1.77
VPS50-215ENST00000480943 SMR3BP02814 79 aaPredicted RBP4.02□□□□□ -1.77
VPS50-215ENST00000480943 IGLC6P0CF74 106 aa4.02□□□□□ -1.77
VPS50-215ENST00000480943 RPS20P60866 119 aaKnown RBP4.02□□□□□ -1.77
VPS50-215ENST00000480943 Q5VSD8 79 aa4.02□□□□□ -1.77
VPS50-215ENST00000480943 C9orf62Q8N4C0 152 aa4.02□□□□□ -1.77
VPS50-215ENST00000480943 C15orf54Q8N8G6 183 aa4.02□□□□□ -1.77
VPS50-215ENST00000480943 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.02□□□□□ -1.77
VPS50-215ENST00000480943 BAALCQ8WXS3 180 aa4.02□□□□□ -1.77
VPS50-215ENST00000480943 FRZBQ92765 325 aa4.02□□□□□ -1.77
VPS50-215ENST00000480943 RMI2Q96E14 147 aa4.02□□□□□ -1.77
VPS50-215ENST00000480943 SMIM12Q96EX1 92 aa4.02□□□□□ -1.77
VPS50-215ENST00000480943 CHCHD5Q9BSY4 110 aa4.02□□□□□ -1.77
VPS50-215ENST00000480943 CHCHD7Q9BUK0 85 aa4.02□□□□□ -1.77
VPS50-215ENST00000480943 SRRM2Q9UQ35 2752 aaKnown RBP4.02□□□□□ -1.77
VPS50-215ENST00000480943 TRBV6-8A0A0A6YYG3 113 aa4.01□□□□□ -1.77
VPS50-215ENST00000480943 CRPP02741 224 aa4.01□□□□□ -1.77
VPS50-215ENST00000480943 ANGP03950 147 aaKnown RBP4.01□□□□□ -1.77
VPS50-215ENST00000480943 CACNG7P62955 275 aa4.01□□□□□ -1.77
VPS50-215ENST00000480943 ELOBQ15370 118 aa4.01□□□□□ -1.77
VPS50-215ENST00000480943 C14orf177Q52M58 125 aa4.01□□□□□ -1.77
VPS50-215ENST00000480943 MPV17L2Q567V2 206 aa4.01□□□□□ -1.77
VPS50-215ENST00000480943 LYZL1Q6UWQ5 148 aa4.01□□□□□ -1.77
VPS50-215ENST00000480943 ALKAL2Q6UX46 152 aa4.01□□□□□ -1.77
VPS50-215ENST00000480943 TMEM70Q9BUB7 260 aa4.01□□□□□ -1.77
VPS50-215ENST00000480943 BIN3Q9NQY0 253 aa4.01□□□□□ -1.77
VPS50-215ENST00000480943 VAX2Q9UIW0 290 aa4.01□□□□□ -1.77
VPS50-215ENST00000480943 KIF25-AS1Q9Y6Z4 181 aa4.01□□□□□ -1.77
VPS50-215ENST00000480943 VPS13BQ7Z7G8 4022 aa4.01□□□□□ -1.77
VPS50-215ENST00000480943 IGLV5-45A0A087WSX0 123 aa4□□□□□ -1.77
VPS50-215ENST00000480943 XKRY2A2RUG3 117 aa4□□□□□ -1.77
VPS50-215ENST00000480943 HLA-DQA1P01909 254 aa4□□□□□ -1.77
VPS50-215ENST00000480943 TRGC1P0CF51 173 aa4□□□□□ -1.77
VPS50-215ENST00000480943 INAFM2P0DMQ5 153 aa4□□□□□ -1.77
VPS50-215ENST00000480943 TAGLN2P37802 199 aaKnown RBP4□□□□□ -1.77
VPS50-215ENST00000480943 NKX2-5P52952 324 aaPredicted RBP4□□□□□ -1.77
VPS50-215ENST00000480943 RPL24P83731 157 aaKnown RBP4□□□□□ -1.77
VPS50-215ENST00000480943 Q0VG73 95 aa4□□□□□ -1.77
VPS50-215ENST00000480943 LINC01620Q4KN68 170 aa4□□□□□ -1.77
VPS50-215ENST00000480943 TMEM97Q5BJF2 176 aa4□□□□□ -1.77
VPS50-215ENST00000480943 ATRAIDQ6UW56 229 aa4□□□□□ -1.77
VPS50-215ENST00000480943 CLPSL2Q6UWE3 100 aa4□□□□□ -1.77
VPS50-215ENST00000480943 NTM-AS1Q6ZSK4 140 aa4□□□□□ -1.77
VPS50-215ENST00000480943 Q8N976 141 aa4□□□□□ -1.77
VPS50-215ENST00000480943 RNASE7Q9H1E1 156 aaKnown RBP4□□□□□ -1.77
VPS50-215ENST00000480943 DPH3P1Q9H4G8 78 aa4□□□□□ -1.77
VPS50-215ENST00000480943 TRBV25-1A0A075B6N4 114 aa3.99□□□□□ -1.77
VPS50-215ENST00000480943 F2Z2F3 143 aa3.99□□□□□ -1.77
VPS50-215ENST00000480943 H7C1H1 209 aa3.99□□□□□ -1.77
VPS50-215ENST00000480943 K7EN84 100 aa3.99□□□□□ -1.77
VPS50-215ENST00000480943 M0QY20 66 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms