RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 C18orf15Q96N68 181 aa7.4□□□□□ -1.22
LINC00173-203ENST00000480237 MAP1LC3CQ9BXW4 147 aa7.4□□□□□ -1.22
LINC00173-203ENST00000480237 CELA1Q9UNI1 258 aa7.4□□□□□ -1.22
LINC00173-203ENST00000480237 COL7A1Q02388 2944 aa7.4□□□□□ -1.23
LINC00173-203ENST00000480237 TEX48A0A1B0GUV7 120 aa7.39□□□□□ -1.23
LINC00173-203ENST00000480237 SPART-AS1P0CW21 52 aa7.39□□□□□ -1.23
LINC00173-203ENST00000480237 TRBV7-3A0A075B6L6 115 aa7.38□□□□□ -1.23
LINC00173-203ENST00000480237 TRBV6-4A0A1B0GX49 114 aa7.38□□□□□ -1.23
LINC00173-203ENST00000480237 TSHBP01222 138 aa7.38□□□□□ -1.23
LINC00173-203ENST00000480237 G0S2P27469 103 aa7.38□□□□□ -1.23
LINC00173-203ENST00000480237 FHL2Q14192 279 aa7.38□□□□□ -1.23
LINC00173-203ENST00000480237 ZNRF2Q8NHG8 242 aa7.38□□□□□ -1.23
LINC00173-203ENST00000480237 PHLDA1Q8WV24 401 aaPredicted RBP7.38□□□□□ -1.23
LINC00173-203ENST00000480237 IFI27L1Q96BM0 104 aa7.38□□□□□ -1.23
LINC00173-203ENST00000480237 SPATA25Q9BR10 227 aa7.38□□□□□ -1.23
LINC00173-203ENST00000480237 PRADC1Q9BSG0 188 aa7.38□□□□□ -1.23
LINC00173-203ENST00000480237 Q9UF83 564 aa7.38□□□□□ -1.23
LINC00173-203ENST00000480237 IGHV3-38A0A0C4DH36 116 aa7.37□□□□□ -1.23
LINC00173-203ENST00000480237 C20orf202A1L168 122 aa7.37□□□□□ -1.23
LINC00173-203ENST00000480237 GAGE12JA6NER3 117 aa7.37□□□□□ -1.23
LINC00173-203ENST00000480237 SYS1-DBNDD2H3BUS1 97 aa7.37□□□□□ -1.23
LINC00173-203ENST00000480237 ATP5LO75964 103 aa7.37□□□□□ -1.23
LINC00173-203ENST00000480237 GAGE1Q13065 139 aa7.37□□□□□ -1.23
LINC00173-203ENST00000480237 GAGE4Q13068 117 aa7.37□□□□□ -1.23
LINC00173-203ENST00000480237 GAGE5Q13069 117 aa7.37□□□□□ -1.23
LINC00173-203ENST00000480237 GAGE13Q4V321 117 aa7.37□□□□□ -1.23
LINC00173-203ENST00000480237 C2orf66Q6UXQ4 117 aa7.37□□□□□ -1.23
LINC00173-203ENST00000480237 SBSPONQ8IVN8 264 aa7.37□□□□□ -1.23
LINC00173-203ENST00000480237 C11orf68Q9H3H3 251 aaKnown RBP7.37□□□□□ -1.23
LINC00173-203ENST00000480237 CYSLTR1Q9Y271 337 aa7.37□□□□□ -1.23
LINC00173-203ENST00000480237 ATP5G1P05496 136 aa7.37□□□□□ -1.23
LINC00173-203ENST00000480237 COTL1Q14019 142 aa7.37□□□□□ -1.23
LINC00173-203ENST00000480237 MRAPQ8TCY5 172 aa7.37□□□□□ -1.23
LINC00173-203ENST00000480237 TOMM6Q96B49 74 aa7.37□□□□□ -1.23
LINC00173-203ENST00000480237 KRTAP9-2Q9BYQ4 174 aa7.37□□□□□ -1.23
LINC00173-203ENST00000480237 LOC100131303A0A0U1RQF7 123 aa7.36□□□□□ -1.23
LINC00173-203ENST00000480237 LINC01549A6NIU2 74 aa7.36□□□□□ -1.23
LINC00173-203ENST00000480237 HTN3P15516 51 aa7.36□□□□□ -1.23
LINC00173-203ENST00000480237 UBE2D3P61077 147 aa7.36□□□□□ -1.23
LINC00173-203ENST00000480237 UBE2D2P62837 147 aa7.36□□□□□ -1.23
LINC00173-203ENST00000480237 PET117Q6UWS5 81 aa7.36□□□□□ -1.23
LINC00173-203ENST00000480237 SCGB3A1Q96QR1 104 aa7.36□□□□□ -1.23
LINC00173-203ENST00000480237 HHLA3Q9XRX5 114 aa7.36□□□□□ -1.23
LINC00173-203ENST00000480237 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.35□□□□□ -1.23
LINC00173-203ENST00000480237 RPL39P62891 51 aaKnown RBP7.35□□□□□ -1.23
LINC00173-203ENST00000480237 DAZ4Q86SG3 579 aaKnown RBP7.35□□□□□ -1.23
LINC00173-203ENST00000480237 CDIP1Q9H305 208 aa7.35□□□□□ -1.23
LINC00173-203ENST00000480237 DAZ3Q9NR90 486 aaKnown RBP7.35□□□□□ -1.23
LINC00173-203ENST00000480237 PRO0255Q9UI72 69 aa7.35□□□□□ -1.23
LINC00173-203ENST00000480237 A0A0J9YWU9 116 aa7.34□□□□□ -1.23
LINC00173-203ENST00000480237 F5H768 121 aa7.34□□□□□ -1.23
LINC00173-203ENST00000480237 GYPEP15421 78 aa7.34□□□□□ -1.23
LINC00173-203ENST00000480237 CRYBA4P53673 196 aa7.34□□□□□ -1.23
LINC00173-203ENST00000480237 KRTAP21-3Q3LHN1 58 aa7.34□□□□□ -1.23
LINC00173-203ENST00000480237 Q6ZN92 141 aa7.34□□□□□ -1.23
LINC00173-203ENST00000480237 SPATA12Q7Z6I5 190 aa7.34□□□□□ -1.23
LINC00173-203ENST00000480237 Q8N976 141 aa7.34□□□□□ -1.23
LINC00173-203ENST00000480237 C20orf203Q8NBC4 194 aa7.34□□□□□ -1.23
LINC00173-203ENST00000480237 TM2D3Q9BRN9 247 aa7.34□□□□□ -1.23
LINC00173-203ENST00000480237 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.33□□□□□ -1.24
LINC00173-203ENST00000480237 PRSS1P07477 247 aa7.33□□□□□ -1.24
LINC00173-203ENST00000480237 LINC01545Q5VT33 79 aa7.33□□□□□ -1.24
LINC00173-203ENST00000480237 ERASQ7Z444 233 aa7.33□□□□□ -1.24
LINC00173-203ENST00000480237 ZMAT4Q9H898 229 aa7.33□□□□□ -1.24
LINC00173-203ENST00000480237 LINC00694P0DN24 101 aa7.33□□□□□ -1.24
LINC00173-203ENST00000480237 TEX43Q6ZNM6 134 aa7.33□□□□□ -1.24
LINC00173-203ENST00000480237 KRTAP19-1Q8IUB9 90 aa7.33□□□□□ -1.24
LINC00173-203ENST00000480237 ATOH7Q8N100 152 aa7.33□□□□□ -1.24
LINC00173-203ENST00000480237 KRTAP4-12Q9BQ66 201 aa7.33□□□□□ -1.24
LINC00173-203ENST00000480237 PMCHL2Q9BQD1 86 aa7.33□□□□□ -1.24
LINC00173-203ENST00000480237 VAMP8Q9BV40 100 aa7.33□□□□□ -1.24
LINC00173-203ENST00000480237 HUWE1Q7Z6Z7 4374 aaKnown RBP7.32□□□□□ -1.24
LINC00173-203ENST00000480237 A0A0J9YY99 117 aa7.32□□□□□ -1.24
LINC00173-203ENST00000480237 KRTAP9-6A0A140TA67 174 aa7.32□□□□□ -1.24
LINC00173-203ENST00000480237 C12orf74Q32Q52 190 aa7.32□□□□□ -1.24
LINC00173-203ENST00000480237 LGALS9CQ6DKI2 356 aa7.32□□□□□ -1.24
LINC00173-203ENST00000480237 TIMM17AQ99595 171 aa7.32□□□□□ -1.24
LINC00173-203ENST00000480237 CHCHD7Q9BUK0 85 aa7.32□□□□□ -1.24
LINC00173-203ENST00000480237 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.31□□□□□ -1.24
LINC00173-203ENST00000480237 TRAV26-1A0A087WT03 109 aa7.31□□□□□ -1.24
LINC00173-203ENST00000480237 IGKV2-29A2NJV5 120 aaPredicted RBP7.31□□□□□ -1.24
LINC00173-203ENST00000480237 BAALCQ8WXS3 180 aa7.31□□□□□ -1.24
LINC00173-203ENST00000480237 TMEM141Q96I45 108 aa7.31□□□□□ -1.24
LINC00173-203ENST00000480237 UBE2L6O14933 153 aa7.3□□□□□ -1.24
LINC00173-203ENST00000480237 ODF1Q14990 250 aa7.3□□□□□ -1.24
LINC00173-203ENST00000480237 TMEM97Q5BJF2 176 aa7.3□□□□□ -1.24
LINC00173-203ENST00000480237 Q6ZTC4 211 aa7.3□□□□□ -1.24
LINC00173-203ENST00000480237 ATP6V0E2Q8NHE4 81 aa7.3□□□□□ -1.24
LINC00173-203ENST00000480237 C11orf45Q8TAV5 145 aa7.3□□□□□ -1.24
LINC00173-203ENST00000480237 TMEM243Q9BU79 118 aa7.3□□□□□ -1.24
LINC00173-203ENST00000480237 GTSF1LQ9H1H1 148 aa7.3□□□□□ -1.24
LINC00173-203ENST00000480237 PAM16Q9Y3D7 125 aa7.3□□□□□ -1.24
LINC00173-203ENST00000480237 DNAH9Q9NYC9 4486 aa7.3□□□□□ -1.24
LINC00173-203ENST00000480237 TRBV25-1A0A075B6N4 114 aa7.29□□□□□ -1.24
LINC00173-203ENST00000480237 TRAV12-1A0A0B4J245 112 aa7.29□□□□□ -1.24
LINC00173-203ENST00000480237 IGIPA6NJ69 53 aa7.29□□□□□ -1.24
LINC00173-203ENST00000480237 LINC00587B1AMM8 73 aa7.29□□□□□ -1.24
LINC00173-203ENST00000480237 NANOS2P60321 138 aaKnown RBP7.29□□□□□ -1.24
LINC00173-203ENST00000480237 VSIG2Q96IQ7 327 aa7.29□□□□□ -1.24
LINC00173-203ENST00000480237 SPANXA1Q9NS26 97 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms