RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 TMEM250H0YL14 139 aa8.5□□□□□ -1.05
ABCF1-206ENST00000479542 HLA-DQA1P01909 254 aa8.5□□□□□ -1.05
ABCF1-206ENST00000479542 SMIM17P0DL12 118 aa8.5□□□□□ -1.05
ABCF1-206ENST00000479542 CACNG7P62955 275 aa8.5□□□□□ -1.05
ABCF1-206ENST00000479542 LYZL1Q6UWQ5 148 aa8.49□□□□□ -1.05
ABCF1-206ENST00000479542 LINC00269Q8N2A0 174 aa8.49□□□□□ -1.05
ABCF1-206ENST00000479542 RNASE7Q9H1E1 156 aaKnown RBP8.49□□□□□ -1.05
ABCF1-206ENST00000479542 RPP21Q9H633 154 aaKnown RBP8.48□□□□□ -1.05
ABCF1-206ENST00000479542 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.47□□□□□ -1.05
ABCF1-206ENST00000479542 IGHV1-24A0A0C4DH33 117 aa8.47□□□□□ -1.05
ABCF1-206ENST00000479542 PANO1I0J062 215 aa8.47□□□□□ -1.05
ABCF1-206ENST00000479542 MGPP08493 103 aa8.47□□□□□ -1.05
ABCF1-206ENST00000479542 NTF3P20783 257 aa8.47□□□□□ -1.05
ABCF1-206ENST00000479542 CTRLP40313 264 aa8.47□□□□□ -1.05
ABCF1-206ENST00000479542 REG3AQ06141 175 aa8.47□□□□□ -1.05
ABCF1-206ENST00000479542 SUMO4Q6EEV6 95 aa8.47□□□□□ -1.05
ABCF1-206ENST00000479542 WDR73Q6P4I2 378 aa8.47□□□□□ -1.05
ABCF1-206ENST00000479542 EIF5A2Q9GZV4 153 aaKnown RBP8.47□□□□□ -1.05
ABCF1-206ENST00000479542 IGHV3-64A0A075B6Q5 118 aa8.46□□□□□ -1.06
ABCF1-206ENST00000479542 A6NJY4 79 aa8.46□□□□□ -1.06
ABCF1-206ENST00000479542 H7C1H1 209 aa8.46□□□□□ -1.06
ABCF1-206ENST00000479542 M0QY20 66 aa8.46□□□□□ -1.06
ABCF1-206ENST00000479542 CEBPGP53567 150 aa8.46□□□□□ -1.06
ABCF1-206ENST00000479542 PGLYRP4Q96LB8 373 aa8.46□□□□□ -1.06
ABCF1-206ENST00000479542 FAM210AQ96ND0 272 aa8.46□□□□□ -1.06
ABCF1-206ENST00000479542 PLAC8Q9NZF1 115 aa8.46□□□□□ -1.06
ABCF1-206ENST00000479542 NDUFS6O75380 124 aaKnown RBP8.45□□□□□ -1.06
ABCF1-206ENST00000479542 TRGC1P0CF51 173 aa8.45□□□□□ -1.06
ABCF1-206ENST00000479542 GAGE6Q13070 117 aa8.45□□□□□ -1.06
ABCF1-206ENST00000479542 CNFNQ9BYD5 112 aa8.45□□□□□ -1.06
ABCF1-206ENST00000479542 DPH3P1Q9H4G8 78 aa8.45□□□□□ -1.06
ABCF1-206ENST00000479542 AP5S1Q9NUS5 200 aa8.45□□□□□ -1.06
ABCF1-206ENST00000479542 A0A087WYN8 130 aa8.44□□□□□ -1.06
ABCF1-206ENST00000479542 GATCO43716 136 aaKnown RBP8.44□□□□□ -1.06
ABCF1-206ENST00000479542 TWIST1Q15672 202 aa8.44□□□□□ -1.06
ABCF1-206ENST00000479542 FAM231DQ6ZW35 169 aa8.44□□□□□ -1.06
ABCF1-206ENST00000479542 C20orf203Q8NBC4 194 aa8.44□□□□□ -1.06
ABCF1-206ENST00000479542 SPACA4Q8TDM5 124 aa8.44□□□□□ -1.06
ABCF1-206ENST00000479542 GTSF1Q8WW33 167 aa8.44□□□□□ -1.06
ABCF1-206ENST00000479542 SMIM7Q9BQ49 75 aa8.44□□□□□ -1.06
ABCF1-206ENST00000479542 TNXBP22105 4242 aa8.43□□□□□ -1.06
ABCF1-206ENST00000479542 hDV102S1A0JD36 115 aa8.43□□□□□ -1.06
ABCF1-206ENST00000479542 SLPIP03973 132 aa8.43□□□□□ -1.06
ABCF1-206ENST00000479542 SRP19P09132 144 aaKnown RBP8.43□□□□□ -1.06
ABCF1-206ENST00000479542 RASL11AQ6T310 242 aa8.43□□□□□ -1.06
ABCF1-206ENST00000479542 CFAP161Q6P656 301 aa8.42□□□□□ -1.06
ABCF1-206ENST00000479542 LINC01551Q86U37 167 aa8.42□□□□□ -1.06
ABCF1-206ENST00000479542 TMEM243Q9BU79 118 aa8.42□□□□□ -1.06
ABCF1-206ENST00000479542 ZNF727A8MUV8 499 aa8.41□□□□□ -1.06
ABCF1-206ENST00000479542 A8MWL6 223 aa8.41□□□□□ -1.06
ABCF1-206ENST00000479542 CLPSL2Q6UWE3 100 aa8.41□□□□□ -1.06
ABCF1-206ENST00000479542 TEX261Q6UWH6 196 aa8.41□□□□□ -1.06
ABCF1-206ENST00000479542 DPH3Q96FX2 82 aa8.41□□□□□ -1.06
ABCF1-206ENST00000479542 LINC01600Q96MT4 127 aa8.41□□□□□ -1.06
ABCF1-206ENST00000479542 NIT2Q9NQR4 276 aa8.41□□□□□ -1.06
ABCF1-206ENST00000479542 IGLV4-60A0A075B6I1 120 aa8.4□□□□□ -1.06
ABCF1-206ENST00000479542 IGLV10-54A0A075B6I4 117 aa8.4□□□□□ -1.06
ABCF1-206ENST00000479542 FOXA3P55318 350 aaPredicted RBP8.4□□□□□ -1.06
ABCF1-206ENST00000479542 CT83Q5H943 113 aa8.4□□□□□ -1.06
ABCF1-206ENST00000479542 GATD1Q8NB37 220 aa8.4□□□□□ -1.06
ABCF1-206ENST00000479542 C7orf33Q8WU49 177 aa8.4□□□□□ -1.06
ABCF1-206ENST00000479542 TMA7Q9Y2S6 64 aaKnown RBP8.4□□□□□ -1.06
ABCF1-206ENST00000479542 TRAV26-2A0A0B4J265 109 aa8.39□□□□□ -1.07
ABCF1-206ENST00000479542 OSTCQ9NRP0 149 aa8.39□□□□□ -1.07
ABCF1-206ENST00000479542 C9JQL5 133 aa8.38□□□□□ -1.07
ABCF1-206ENST00000479542 RPS10P46783 165 aaKnown RBP8.38□□□□□ -1.07
ABCF1-206ENST00000479542 SMIM15Q7Z3B0 74 aa8.38□□□□□ -1.07
ABCF1-206ENST00000479542 TSKUQ8WUA8 353 aa8.38□□□□□ -1.07
ABCF1-206ENST00000479542 GFRA4Q9GZZ7 299 aa8.38□□□□□ -1.07
ABCF1-206ENST00000479542 H7C423 109 aa8.37□□□□□ -1.07
ABCF1-206ENST00000479542 SRSF3P84103 164 aaKnown RBP8.37□□□□□ -1.07
ABCF1-206ENST00000479542 LRP2P98164 4655 aa8.37□□□□□ -1.07
ABCF1-206ENST00000479542 TMEM241Q24JQ0 296 aa8.37□□□□□ -1.07
ABCF1-206ENST00000479542 FAM74A3Q4VXF1 159 aa8.37□□□□□ -1.07
ABCF1-206ENST00000479542 HIGD1CA8MV81 97 aa8.36□□□□□ -1.07
ABCF1-206ENST00000479542 PHOX2AO14813 284 aa8.36□□□□□ -1.07
ABCF1-206ENST00000479542 UBE2L6O14933 153 aa8.36□□□□□ -1.07
ABCF1-206ENST00000479542 CHTF8P0CG12 524 aa8.36□□□□□ -1.07
ABCF1-206ENST00000479542 COTL1Q14019 142 aa8.36□□□□□ -1.07
ABCF1-206ENST00000479542 C15orf56Q8N910 161 aa8.36□□□□□ -1.07
ABCF1-206ENST00000479542 ISOC2Q96AB3 205 aa8.36□□□□□ -1.07
ABCF1-206ENST00000479542 BORCS7Q96B45 105 aa8.36□□□□□ -1.07
ABCF1-206ENST00000479542 RPL39LQ96EH5 51 aaKnown RBP8.36□□□□□ -1.07
ABCF1-206ENST00000479542 LINC00474Q9P2X8 69 aa8.36□□□□□ -1.07
ABCF1-206ENST00000479542 PKIGQ9Y2B9 76 aa8.36□□□□□ -1.07
ABCF1-206ENST00000479542 V9GYV3 84 aa8.36□□□□□ -1.07
ABCF1-206ENST00000479542 A0A1B0GUT8 65 aa8.35□□□□□ -1.07
ABCF1-206ENST00000479542 FAM231BA6NCW3 169 aa8.35□□□□□ -1.07
ABCF1-206ENST00000479542 NCR2O95944 276 aa8.35□□□□□ -1.07
ABCF1-206ENST00000479542 KRTAP10-8P60410 259 aa8.35□□□□□ -1.07
ABCF1-206ENST00000479542 RPL23P62829 140 aaKnown RBP8.35□□□□□ -1.07
ABCF1-206ENST00000479542 COX6A2Q02221 97 aa8.35□□□□□ -1.07
ABCF1-206ENST00000479542 PEA15Q15121 130 aa8.35□□□□□ -1.07
ABCF1-206ENST00000479542 GVQW2A0A096LPI5 108 aaPredicted RBP8.34□□□□□ -1.07
ABCF1-206ENST00000479542 AMTP48728 403 aa8.34□□□□□ -1.07
ABCF1-206ENST00000479542 ADIRFQ15847 76 aa8.34□□□□□ -1.07
ABCF1-206ENST00000479542 SPINK6Q6UWN8 80 aa8.34□□□□□ -1.07
ABCF1-206ENST00000479542 NAT8Q9UHE5 227 aa8.34□□□□□ -1.07
ABCF1-206ENST00000479542 A0A0J9YXV3 536 aa8.33□□□□□ -1.08
ABCF1-206ENST00000479542 PRR3P79522 188 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms