RNA–Protein interactions for RNA: ENST00000479197.1

RFK-204, Transcript of riboflavin kinase, human

TSL 1 (best)

Gene RFK, Length 1,501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFK-204	ENST00000479197	FAT2	Q9NYQ8	4349 aa		12.16	□□□□□ -0.46
RFK-204	ENST00000479197	TMEM262	E9PQX1	116 aa		12.16	□□□□□ -0.46
RFK-204	ENST00000479197	PMCH	P20382	165 aa		12.16	□□□□□ -0.46
RFK-204	ENST00000479197	POLR2K	P53803	58 aa	Known RBP	12.16	□□□□□ -0.46
RFK-204	ENST00000479197	PKIA	P61925	76 aa		12.16	□□□□□ -0.46
RFK-204	ENST00000479197	SUMO2	P61956	95 aa	Known RBP	12.16	□□□□□ -0.46
RFK-204	ENST00000479197	TMEM243	Q9BU79	118 aa		12.16	□□□□□ -0.46
RFK-204	ENST00000479197	TRBV24-1	A0A075B6N3	115 aa		12.15	□□□□□ -0.46
RFK-204	ENST00000479197	TRBV27	A0A0K0K1C4	114 aa		12.15	□□□□□ -0.46
RFK-204	ENST00000479197	IBA57-AS1	B1ANH7	110 aa		12.15	□□□□□ -0.46
RFK-204	ENST00000479197	AMT	P48728	403 aa		12.15	□□□□□ -0.46
RFK-204	ENST00000479197	LINC00336	Q6ZUF6	198 aa		12.15	□□□□□ -0.46
RFK-204	ENST00000479197	ORMDL3	Q8N138	153 aa		12.15	□□□□□ -0.46
RFK-204	ENST00000479197	TMEM136	Q6ZRR5	245 aa		12.14	□□□□□ -0.47
RFK-204	ENST00000479197	C20orf78	Q9BR46	151 aa		12.14	□□□□□ -0.47
RFK-204	ENST00000479197	TNFRSF6B	O95407	300 aa		12.13	□□□□□ -0.47
RFK-204	ENST00000479197	APCS	P02743	223 aa		12.13	□□□□□ -0.47
RFK-204	ENST00000479197	GAGE6	Q13070	117 aa		12.13	□□□□□ -0.47
RFK-204	ENST00000479197	LAGE3	Q14657	143 aa		12.13	□□□□□ -0.47
RFK-204	ENST00000479197	MPV17L2	Q567V2	206 aa		12.13	□□□□□ -0.47
RFK-204	ENST00000479197	NFE4	Q86UQ8	179 aa		12.13	□□□□□ -0.47
RFK-204	ENST00000479197	VCY	O14598	125 aa		12.12	□□□□□ -0.47
RFK-204	ENST00000479197	PHOX2A	O14813	284 aa		12.12	□□□□□ -0.47
RFK-204	ENST00000479197	TSHB	P01222	138 aa		12.12	□□□□□ -0.47
RFK-204	ENST00000479197	NPY	P01303	97 aa		12.12	□□□□□ -0.47
RFK-204	ENST00000479197	UBE2L6	O14933	153 aa		12.11	□□□□□ -0.47
RFK-204	ENST00000479197	ELOB	Q15370	118 aa		12.11	□□□□□ -0.47
RFK-204	ENST00000479197	ATRAID	Q6UW56	229 aa		12.11	□□□□□ -0.47
RFK-204	ENST00000479197	PRELID3A	Q96N28	172 aa		12.11	□□□□□ -0.47
RFK-204	ENST00000479197	PRSS29P	A6NIE9	313 aa		12.11	□□□□□ -0.47
RFK-204	ENST00000479197	HLA-DQA1	P01909	254 aa		12.11	□□□□□ -0.47
RFK-204	ENST00000479197	COX19	Q49B96	90 aa		12.11	□□□□□ -0.47
RFK-204	ENST00000479197	GNB1L	Q9BYB4	327 aa		12.11	□□□□□ -0.47
RFK-204	ENST00000479197	KLK12	Q9UKR0	248 aa		12.11	□□□□□ -0.47
RFK-204	ENST00000479197	RBX1	P62877	108 aa		12.1	□□□□□ -0.47
RFK-204	ENST00000479197	RPL32	P62910	135 aa	Known RBP	12.1	□□□□□ -0.47
RFK-204	ENST00000479197		Q6ZRN7	208 aa	Predicted RBP	12.1	□□□□□ -0.47
RFK-204	ENST00000479197		Q8N976	141 aa		12.1	□□□□□ -0.47
RFK-204	ENST00000479197	KIR2DL4	Q99706	377 aa		12.1	□□□□□ -0.47
RFK-204	ENST00000479197		Q9HAA7	133 aa		12.1	□□□□□ -0.47
RFK-204	ENST00000479197	LAMTOR2	Q9Y2Q5	125 aa		12.1	□□□□□ -0.47
RFK-204	ENST00000479197	SMIM2	Q9BVW6	85 aa		12.09	□□□□□ -0.47
RFK-204	ENST00000479197	TRAV8-3	A0A0A6YYJ7	113 aa		12.08	□□□□□ -0.48
RFK-204	ENST00000479197	TGIF2-C20orf24	A0A0A6YYL0	155 aa		12.08	□□□□□ -0.48
RFK-204	ENST00000479197	ANG	P03950	147 aa	Known RBP	12.08	□□□□□ -0.48
RFK-204	ENST00000479197	FCER1G	P30273	86 aa		12.08	□□□□□ -0.48
RFK-204	ENST00000479197	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	12.07	□□□□□ -0.48
RFK-204	ENST00000479197	IGKV2-29	A2NJV5	120 aa	Predicted RBP	12.07	□□□□□ -0.48
RFK-204	ENST00000479197		H7C423	109 aa		12.07	□□□□□ -0.48
RFK-204	ENST00000479197	MT-ND6	P03923	174 aa		12.07	□□□□□ -0.48
RFK-204	ENST00000479197		A0A1B0GUV1	79 aa		12.06	□□□□□ -0.48
RFK-204	ENST00000479197	ESD	P10768	282 aa		12.06	□□□□□ -0.48
RFK-204	ENST00000479197	TNP2	Q05952	138 aa		12.06	□□□□□ -0.48
RFK-204	ENST00000479197	UBE2W	Q96B02	151 aa		12.06	□□□□□ -0.48
RFK-204	ENST00000479197	EPPK1	P58107	5090 aa	Known RBP	12.06	□□□□□ -0.48
RFK-204	ENST00000479197	TCAP	O15273	167 aa		12.06	□□□□□ -0.48
RFK-204	ENST00000479197	KIAA1644	Q3SXP7	199 aa		12.06	□□□□□ -0.48
RFK-204	ENST00000479197	MAP1LC3A	Q9H492	121 aa		12.06	□□□□□ -0.48
RFK-204	ENST00000479197	CRP	P02741	224 aa		12.05	□□□□□ -0.48
RFK-204	ENST00000479197		Q0VG73	95 aa		12.05	□□□□□ -0.48
RFK-204	ENST00000479197	AMMECR1L	Q6DCA0	310 aa		12.05	□□□□□ -0.48
RFK-204	ENST00000479197	HECTD4	Q9Y4D8	3996 aa		12.04	□□□□□ -0.48
RFK-204	ENST00000479197	IGLV4-60	A0A075B6I1	120 aa		12.04	□□□□□ -0.48
RFK-204	ENST00000479197	PRSS47	A8MTI9	375 aa		12.04	□□□□□ -0.48
RFK-204	ENST00000479197	FGF6	P10767	208 aa		12.04	□□□□□ -0.48
RFK-204	ENST00000479197	C20orf203	Q8NBC4	194 aa		12.04	□□□□□ -0.48
RFK-204	ENST00000479197	YPEL4	Q96NS1	127 aa		12.04	□□□□□ -0.48
RFK-204	ENST00000479197	MRPL18	Q9H0U6	180 aa	Known RBP	12.04	□□□□□ -0.48
RFK-204	ENST00000479197	SMCO4	Q9NRQ5	59 aa		12.04	□□□□□ -0.48
RFK-204	ENST00000479197	PKD1	P98161	4303 aa		12.04	□□□□□ -0.48
RFK-204	ENST00000479197	LOC389332	A0A1B0GUA5	103 aa		12.03	□□□□□ -0.48
RFK-204	ENST00000479197	PSCA	O43653	123 aa		12.03	□□□□□ -0.48
RFK-204	ENST00000479197	RNASEK	Q6P5S7	137 aa	Known RBP	12.03	□□□□□ -0.48
RFK-204	ENST00000479197	ENHO	Q6UWT2	76 aa		12.03	□□□□□ -0.48
RFK-204	ENST00000479197	CBLN2	Q8IUK8	224 aa		12.03	□□□□□ -0.48
RFK-204	ENST00000479197	LINC00269	Q8N2A0	174 aa		12.03	□□□□□ -0.48
RFK-204	ENST00000479197	RMI2	Q96E14	147 aa		12.03	□□□□□ -0.48
RFK-204	ENST00000479197	PRR34	Q9NV39	138 aa		12.03	□□□□□ -0.48
RFK-204	ENST00000479197	ZNF25	P17030	456 aa	Predicted RBP	12.02	□□□□□ -0.48
RFK-204	ENST00000479197	CLPSL2	Q6UWE3	100 aa		12.02	□□□□□ -0.48
RFK-204	ENST00000479197	TM2D2	Q9BX73	214 aa		12.02	□□□□□ -0.48
RFK-204	ENST00000479197	DNAH11	Q96DT5	4516 aa		12.01	□□□□□ -0.49
RFK-204	ENST00000479197		A0A1B0GVY2	172 aa		12.01	□□□□□ -0.49
RFK-204	ENST00000479197	FABP9	Q0Z7S8	132 aa		12.01	□□□□□ -0.49
RFK-204	ENST00000479197	MIA	Q16674	131 aa		12.01	□□□□□ -0.49
RFK-204	ENST00000479197	IGKV2D-24	A0A075B6R9	120 aa		12.01	□□□□□ -0.49
RFK-204	ENST00000479197	RAB5A	P20339	215 aa		12.01	□□□□□ -0.49
RFK-204	ENST00000479197	REG3A	Q06141	175 aa		12.01	□□□□□ -0.49
RFK-204	ENST00000479197	MRPL52	Q86TS9	123 aa	Known RBP	12.01	□□□□□ -0.49
RFK-204	ENST00000479197	TRAPPC1	Q9Y5R8	145 aa		12.01	□□□□□ -0.49
RFK-204	ENST00000479197	COX11	Q9Y6N1	276 aa		12.01	□□□□□ -0.49
RFK-204	ENST00000479197		Q8N8P6	123 aa		12	□□□□□ -0.49
RFK-204	ENST00000479197	TMEM18	Q96B42	140 aa		12	□□□□□ -0.49
RFK-204	ENST00000479197	TMEM101	Q96IK0	257 aa		12	□□□□□ -0.49
RFK-204	ENST00000479197	ALKBH7	Q9BT30	221 aa	Predicted RBP	12	□□□□□ -0.49
RFK-204	ENST00000479197	OR5A1	Q8NGJ0	315 aa		11.99	□□□□□ -0.49
RFK-204	ENST00000479197	C1orf43	Q9BWL3	253 aa		11.99	□□□□□ -0.49
RFK-204	ENST00000479197	SMAGP	Q0VAQ4	97 aa		11.98	□□□□□ -0.49
RFK-204	ENST00000479197	NXT2	Q9NPJ8	142 aa	Known RBP	11.98	□□□□□ -0.49
RFK-204	ENST00000479197	PKHD1	P08F94	4074 aa		11.97	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms