RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 RPS28P62857 69 aaKnown RBP-0.57□□□□□ -2.5
HPS3-205ENST00000478525 HAMPP81172 84 aa-0.57□□□□□ -2.5
HPS3-205ENST00000478525 OR8I2Q8N0Y5 310 aa-0.57□□□□□ -2.5
HPS3-205ENST00000478525 MMGT1Q8N4V1 131 aa-0.57□□□□□ -2.5
HPS3-205ENST00000478525 SMIM20Q8N5G0 67 aa-0.57□□□□□ -2.5
HPS3-205ENST00000478525 TMEM35BQ8NCS4 154 aa-0.57□□□□□ -2.5
HPS3-205ENST00000478525 SDF2Q99470 211 aa-0.57□□□□□ -2.5
HPS3-205ENST00000478525 MRPL40Q9NQ50 206 aaKnown RBP-0.57□□□□□ -2.5
HPS3-205ENST00000478525 BICRAQ9NZM4 1560 aa-0.57□□□□□ -2.5
HPS3-205ENST00000478525 HYDINQ4G0P3 5121 aa-0.58□□□□□ -2.5
HPS3-205ENST00000478525 PTPRMP28827 1452 aa-0.58□□□□□ -2.5
HPS3-205ENST00000478525 A0A1W2PRE2 83 aa-0.58□□□□□ -2.5
HPS3-205ENST00000478525 E5RI56 91 aa-0.58□□□□□ -2.5
HPS3-205ENST00000478525 COX8AP10176 69 aa-0.58□□□□□ -2.5
HPS3-205ENST00000478525 S100A5P33763 92 aa-0.58□□□□□ -2.5
HPS3-205ENST00000478525 C9orf116Q5BN46 136 aaPredicted RBP-0.58□□□□□ -2.5
HPS3-205ENST00000478525 MNS1Q8NEH6 495 aa-0.58□□□□□ -2.5
HPS3-205ENST00000478525 VSTM2AQ8TAG5 236 aa-0.58□□□□□ -2.5
HPS3-205ENST00000478525 FXYD6Q9H0Q3 95 aa-0.58□□□□□ -2.5
HPS3-205ENST00000478525 LINC00472Q9H8W2 130 aa-0.58□□□□□ -2.5
HPS3-205ENST00000478525 TRAPPC2LQ9UL33 140 aa-0.58□□□□□ -2.5
HPS3-205ENST00000478525 DNAH6Q9C0G6 4158 aa-0.58□□□□□ -2.5
HPS3-205ENST00000478525 MUC22E2RYF6 1773 aaPredicted RBP-0.58□□□□□ -2.5
HPS3-205ENST00000478525 ZMYM4Q5VZL5 1548 aa-0.59□□□□□ -2.5
HPS3-205ENST00000478525 GAPVD1Q14C86 1478 aa-0.59□□□□□ -2.5
HPS3-205ENST00000478525 SHANK2Q9UPX8 1470 aa-0.59□□□□□ -2.5
HPS3-205ENST00000478525 EPPK1P58107 5090 aaKnown RBP-0.59□□□□□ -2.5
HPS3-205ENST00000478525 TRBV20-1A0A075B6N2 111 aa-0.59□□□□□ -2.5
HPS3-205ENST00000478525 I3L2K1 104 aa-0.59□□□□□ -2.5
HPS3-205ENST00000478525 NCR2O95944 276 aa-0.59□□□□□ -2.5
HPS3-205ENST00000478525 APOC3P02656 99 aa-0.59□□□□□ -2.5
HPS3-205ENST00000478525 TFF1P04155 84 aa-0.59□□□□□ -2.5
HPS3-205ENST00000478525 UBE2D1P51668 147 aa-0.59□□□□□ -2.5
HPS3-205ENST00000478525 TPPP2P59282 170 aa-0.59□□□□□ -2.5
HPS3-205ENST00000478525 NCS1P62166 190 aa-0.59□□□□□ -2.5
HPS3-205ENST00000478525 TMEM170BQ5T4T1 132 aa-0.59□□□□□ -2.5
HPS3-205ENST00000478525 SAMD13Q5VXD3 122 aa-0.59□□□□□ -2.5
HPS3-205ENST00000478525 TCTE3Q8IZS6 198 aa-0.59□□□□□ -2.5
HPS3-205ENST00000478525 DEFB123Q8N688 67 aa-0.59□□□□□ -2.5
HPS3-205ENST00000478525 USMG5Q96IX5 58 aa-0.59□□□□□ -2.5
HPS3-205ENST00000478525 NDUFA12Q9UI09 145 aa-0.59□□□□□ -2.5
HPS3-205ENST00000478525 DNAJC15Q9Y5T4 150 aa-0.59□□□□□ -2.5
HPS3-205ENST00000478525 OVOS2A0A0G2JMS6 1433 aa-0.59□□□□□ -2.5
HPS3-205ENST00000478525 ITPR3Q14573 2671 aa-0.59□□□□□ -2.5
HPS3-205ENST00000478525 NBPF19A0A087WUL8 3843 aa-0.59□□□□□ -2.5
HPS3-205ENST00000478525 RYR1P21817 5038 aa-0.59□□□□□ -2.5
HPS3-205ENST00000478525 RAPGEF6Q8TEU7 1601 aa-0.6□□□□□ -2.5
HPS3-205ENST00000478525 MRC1P22897 1456 aa-0.6□□□□□ -2.5
HPS3-205ENST00000478525 DOPEY1Q5JWR5 2465 aa-0.6□□□□□ -2.51
HPS3-205ENST00000478525 CTXND1A0A1B0GTU2 59 aa-0.6□□□□□ -2.51
HPS3-205ENST00000478525 SYS1-DBNDD2H3BUS1 97 aa-0.6□□□□□ -2.51
HPS3-205ENST00000478525 DBIP07108 87 aaKnown RBP-0.6□□□□□ -2.51
HPS3-205ENST00000478525 SCTP09683 121 aa-0.6□□□□□ -2.51
HPS3-205ENST00000478525 CBLN1P23435 193 aa-0.6□□□□□ -2.51
HPS3-205ENST00000478525 CCL18P55774 89 aa-0.6□□□□□ -2.51
HPS3-205ENST00000478525 CCL8P80075 99 aa-0.6□□□□□ -2.51
HPS3-205ENST00000478525 DEFB135Q30KP9 77 aa-0.6□□□□□ -2.51
HPS3-205ENST00000478525 TMEM128Q5BJH2 165 aa-0.6□□□□□ -2.51
HPS3-205ENST00000478525 CLLU1Q5K131 121 aa-0.6□□□□□ -2.51
HPS3-205ENST00000478525 LINC01545Q5VT33 79 aa-0.6□□□□□ -2.51
HPS3-205ENST00000478525 HRCT1Q6UXD1 115 aa-0.6□□□□□ -2.51
HPS3-205ENST00000478525 DEFB105AQ8NG35 78 aa-0.6□□□□□ -2.51
HPS3-205ENST00000478525 PCBD2Q9H0N5 130 aa-0.6□□□□□ -2.51
HPS3-205ENST00000478525 CENPHQ9H3R5 247 aa-0.6□□□□□ -2.51
HPS3-205ENST00000478525 BANF2Q9H503 90 aa-0.6□□□□□ -2.51
HPS3-205ENST00000478525 PATJQ8NI35 1801 aa-0.6□□□□□ -2.51
HPS3-205ENST00000478525 SPTBN4Q9H254 2564 aa-0.6□□□□□ -2.51
HPS3-205ENST00000478525 MYOM3Q5VTT5 1437 aa-0.61□□□□□ -2.51
HPS3-205ENST00000478525 KIF21AQ7Z4S6 1674 aa-0.61□□□□□ -2.51
HPS3-205ENST00000478525 PKHD1L1Q86WI1 4243 aa-0.61□□□□□ -2.51
HPS3-205ENST00000478525 E2F6O75461 281 aa-0.61□□□□□ -2.51
HPS3-205ENST00000478525 RPL7P18124 248 aaKnown RBP-0.61□□□□□ -2.51
HPS3-205ENST00000478525 TFAMQ00059 246 aaKnown RBP-0.61□□□□□ -2.51
HPS3-205ENST00000478525 KRTAP6-2Q3LI66 62 aa-0.61□□□□□ -2.51
HPS3-205ENST00000478525 Q6JHZ5 121 aa-0.61□□□□□ -2.51
HPS3-205ENST00000478525 TAC4Q86UU9 113 aa-0.61□□□□□ -2.51
HPS3-205ENST00000478525 AQP10Q96PS8 301 aa-0.61□□□□□ -2.51
HPS3-205ENST00000478525 PSMG3Q9BT73 122 aaPredicted RBP-0.61□□□□□ -2.51
HPS3-205ENST00000478525 GID8Q9NWU2 228 aa-0.61□□□□□ -2.51
HPS3-205ENST00000478525 HSPB11Q9Y547 144 aa-0.61□□□□□ -2.51
HPS3-205ENST00000478525 V9GYQ6 96 aa-0.61□□□□□ -2.51
HPS3-205ENST00000478525 PKD1P98161 4303 aa-0.61□□□□□ -2.51
HPS3-205ENST00000478525 FASNP49327 2511 aaKnown RBP-0.61□□□□□ -2.51
HPS3-205ENST00000478525 TMEM2Q9UHN6 1383 aa-0.61□□□□□ -2.51
HPS3-205ENST00000478525 POLA1P09884 1462 aaPredicted RBP-0.61□□□□□ -2.51
HPS3-205ENST00000478525 CCDC141Q6ZP82 1450 aa-0.61□□□□□ -2.51
HPS3-205ENST00000478525 TACC2O95359 2948 aa-0.61□□□□□ -2.51
HPS3-205ENST00000478525 SPEF2Q9C093 1822 aa-0.61□□□□□ -2.51
HPS3-205ENST00000478525 SETBP1Q9Y6X0 1596 aa-0.62□□□□□ -2.51
HPS3-205ENST00000478525 LAMA2P24043 3122 aaKnown RBP-0.62□□□□□ -2.51
HPS3-205ENST00000478525 HECTD1Q9ULT8 2610 aa-0.62□□□□□ -2.51
HPS3-205ENST00000478525 NBASA2RRP1 2371 aa-0.62□□□□□ -2.51
HPS3-205ENST00000478525 NSD3Q9BZ95 1437 aa-0.62□□□□□ -2.51
HPS3-205ENST00000478525 TRBV7-4A0A0J9YYF1 115 aa-0.62□□□□□ -2.51
HPS3-205ENST00000478525 A0A1B0GV72 72 aa-0.62□□□□□ -2.51
HPS3-205ENST00000478525 A0A1B0GX51 115 aa-0.62□□□□□ -2.51
HPS3-205ENST00000478525 M0R135 149 aa-0.62□□□□□ -2.51
HPS3-205ENST00000478525 UQCR11O14957 56 aa-0.62□□□□□ -2.51
HPS3-205ENST00000478525 PPP1R17O96001 155 aa-0.62□□□□□ -2.51
HPS3-205ENST00000478525 S100GP29377 79 aa-0.62□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms