RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 LYZL1Q6UWQ5 148 aa9.36□□□□□ -0.91
SMARCE1-209ENST00000478349 hDV102S1A0JD36 115 aa9.35□□□□□ -0.91
SMARCE1-209ENST00000478349 RAB19A4D1S5 217 aa9.35□□□□□ -0.91
SMARCE1-209ENST00000478349 CTRLP40313 264 aa9.35□□□□□ -0.91
SMARCE1-209ENST00000478349 SLC51BQ86UW2 128 aa9.35□□□□□ -0.91
SMARCE1-209ENST00000478349 C9orf62Q8N4C0 152 aa9.35□□□□□ -0.91
SMARCE1-209ENST00000478349 IGLV10-54A0A075B6I4 117 aa9.34□□□□□ -0.91
SMARCE1-209ENST00000478349 NTF3P20783 257 aa9.34□□□□□ -0.91
SMARCE1-209ENST00000478349 CNBPP62633 177 aaKnown RBP9.34□□□□□ -0.91
SMARCE1-209ENST00000478349 TWIST1Q15672 202 aa9.34□□□□□ -0.91
SMARCE1-209ENST00000478349 TEX261Q6UWH6 196 aa9.34□□□□□ -0.91
SMARCE1-209ENST00000478349 RPP21Q9H633 154 aaKnown RBP9.34□□□□□ -0.91
SMARCE1-209ENST00000478349 IGHV3-64A0A075B6Q5 118 aa9.33□□□□□ -0.92
SMARCE1-209ENST00000478349 CFAP161Q6P656 301 aa9.33□□□□□ -0.92
SMARCE1-209ENST00000478349 TCTE3Q8IZS6 198 aa9.33□□□□□ -0.92
SMARCE1-209ENST00000478349 C20orf203Q8NBC4 194 aa9.33□□□□□ -0.92
SMARCE1-209ENST00000478349 CNFNQ9BYD5 112 aa9.33□□□□□ -0.92
SMARCE1-209ENST00000478349 TRBV20OR9-2A0A075B6H5 130 aa9.32□□□□□ -0.92
SMARCE1-209ENST00000478349 AMMECR1LQ6DCA0 310 aa9.32□□□□□ -0.92
SMARCE1-209ENST00000478349 KRTAP26-1Q6PEX3 210 aa9.32□□□□□ -0.92
SMARCE1-209ENST00000478349 NCR2O95944 276 aa9.31□□□□□ -0.92
SMARCE1-209ENST00000478349 KRTAP10-4P60372 401 aaPredicted RBP9.31□□□□□ -0.92
SMARCE1-209ENST00000478349 NUDT10Q8NFP7 164 aa9.31□□□□□ -0.92
SMARCE1-209ENST00000478349 NUDT11Q96G61 164 aa9.31□□□□□ -0.92
SMARCE1-209ENST00000478349 RNF185Q96GF1 192 aa9.31□□□□□ -0.92
SMARCE1-209ENST00000478349 SDIM1Q6ZPB5 146 aa9.3□□□□□ -0.92
SMARCE1-209ENST00000478349 BORCS7Q96B45 105 aa9.3□□□□□ -0.92
SMARCE1-209ENST00000478349 DPH3Q96FX2 82 aa9.3□□□□□ -0.92
SMARCE1-209ENST00000478349 PKIGQ9Y2B9 76 aa9.3□□□□□ -0.92
SMARCE1-209ENST00000478349 IGLV4-60A0A075B6I1 120 aa9.29□□□□□ -0.92
SMARCE1-209ENST00000478349 TMEM250H0YL14 139 aa9.29□□□□□ -0.92
SMARCE1-209ENST00000478349 H7C423 109 aa9.29□□□□□ -0.92
SMARCE1-209ENST00000478349 APCSP02743 223 aa9.28□□□□□ -0.92
SMARCE1-209ENST00000478349 BLOC1S1P78537 153 aa9.28□□□□□ -0.92
SMARCE1-209ENST00000478349 FAM210AQ96ND0 272 aa9.28□□□□□ -0.92
SMARCE1-209ENST00000478349 RNASE7Q9H1E1 156 aaKnown RBP9.28□□□□□ -0.92
SMARCE1-209ENST00000478349 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.28□□□□□ -0.92
SMARCE1-209ENST00000478349 A8MWL6 223 aa9.27□□□□□ -0.93
SMARCE1-209ENST00000478349 ZNF25P17030 456 aaPredicted RBP9.27□□□□□ -0.93
SMARCE1-209ENST00000478349 CIRBPQ14011 172 aaKnown RBP9.27□□□□□ -0.93
SMARCE1-209ENST00000478349 RNASEKQ6P5S7 137 aaKnown RBP9.27□□□□□ -0.93
SMARCE1-209ENST00000478349 GATD1Q8NB37 220 aa9.27□□□□□ -0.93
SMARCE1-209ENST00000478349 BTF3L4Q96K17 158 aa9.27□□□□□ -0.93
SMARCE1-209ENST00000478349 GAGE12HA6NDE8 117 aa9.26□□□□□ -0.93
SMARCE1-209ENST00000478349 GATCO43716 136 aaKnown RBP9.26□□□□□ -0.93
SMARCE1-209ENST00000478349 CT83Q5H943 113 aa9.26□□□□□ -0.93
SMARCE1-209ENST00000478349 OCC1Q8TAD7 63 aa9.26□□□□□ -0.93
SMARCE1-209ENST00000478349 C7orf33Q8WU49 177 aa9.26□□□□□ -0.93
SMARCE1-209ENST00000478349 TMEM101Q96IK0 257 aa9.26□□□□□ -0.93
SMARCE1-209ENST00000478349 DNAH8Q96JB1 4490 aa9.26□□□□□ -0.93
SMARCE1-209ENST00000478349 TRAV26-2A0A0B4J265 109 aa9.25□□□□□ -0.93
SMARCE1-209ENST00000478349 IGKV3OR2-268A0A0C4DH90 116 aa9.25□□□□□ -0.93
SMARCE1-209ENST00000478349 K7EN84 100 aa9.25□□□□□ -0.93
SMARCE1-209ENST00000478349 FAM231DQ6ZW35 169 aa9.25□□□□□ -0.93
SMARCE1-209ENST00000478349 GFRA4Q9GZZ7 299 aa9.25□□□□□ -0.93
SMARCE1-209ENST00000478349 SDHAF1A6NFY7 115 aa9.24□□□□□ -0.93
SMARCE1-209ENST00000478349 RPS10P46783 165 aaKnown RBP9.24□□□□□ -0.93
SMARCE1-209ENST00000478349 AKAP14Q86UN6 197 aa9.24□□□□□ -0.93
SMARCE1-209ENST00000478349 I3L3M4 83 aa9.23□□□□□ -0.93
SMARCE1-209ENST00000478349 FGF6P10767 208 aa9.23□□□□□ -0.93
SMARCE1-209ENST00000478349 PMCHP20382 165 aa9.23□□□□□ -0.93
SMARCE1-209ENST00000478349 Q6ZRU5 148 aa9.23□□□□□ -0.93
SMARCE1-209ENST00000478349 SPACA4Q8TDM5 124 aa9.23□□□□□ -0.93
SMARCE1-209ENST00000478349 CHCHD10Q8WYQ3 142 aaPredicted RBP9.23□□□□□ -0.93
SMARCE1-209ENST00000478349 A0A087WYN8 130 aa9.22□□□□□ -0.93
SMARCE1-209ENST00000478349 CEBPGP53567 150 aa9.22□□□□□ -0.93
SMARCE1-209ENST00000478349 SMAGPQ0VAQ4 97 aa9.22□□□□□ -0.93
SMARCE1-209ENST00000478349 Q6ZNX1 250 aa9.22□□□□□ -0.93
SMARCE1-209ENST00000478349 C15orf56Q8N910 161 aa9.22□□□□□ -0.93
SMARCE1-209ENST00000478349 GTSF1Q8WW33 167 aa9.22□□□□□ -0.93
SMARCE1-209ENST00000478349 RPL39LQ96EH5 51 aaKnown RBP9.22□□□□□ -0.93
SMARCE1-209ENST00000478349 MRAP2Q96G30 205 aa9.22□□□□□ -0.93
SMARCE1-209ENST00000478349 LINC00474Q9P2X8 69 aa9.22□□□□□ -0.93
SMARCE1-209ENST00000478349 PLA2G2DQ9UNK4 145 aa9.22□□□□□ -0.93
SMARCE1-209ENST00000478349 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.21□□□□□ -0.94
SMARCE1-209ENST00000478349 GVQW2A0A096LPI5 108 aaPredicted RBP9.21□□□□□ -0.94
SMARCE1-209ENST00000478349 TRBV6-5A0A0K0K1A5 114 aa9.21□□□□□ -0.94
SMARCE1-209ENST00000478349 IGKV2-29A2NJV5 120 aaPredicted RBP9.21□□□□□ -0.94
SMARCE1-209ENST00000478349 PANO1I0J062 215 aa9.21□□□□□ -0.94
SMARCE1-209ENST00000478349 NDUFS6O75380 124 aaKnown RBP9.21□□□□□ -0.94
SMARCE1-209ENST00000478349 OR5A1Q8NGJ0 315 aa9.21□□□□□ -0.94
SMARCE1-209ENST00000478349 ST20Q9HBF5 79 aa9.21□□□□□ -0.94
SMARCE1-209ENST00000478349 A0A1B0GUT8 65 aa9.2□□□□□ -0.94
SMARCE1-209ENST00000478349 FAM231BA6NCW3 169 aa9.2□□□□□ -0.94
SMARCE1-209ENST00000478349 PPP1R17O96001 155 aa9.2□□□□□ -0.94
SMARCE1-209ENST00000478349 FOXA3P55318 350 aaPredicted RBP9.2□□□□□ -0.94
SMARCE1-209ENST00000478349 HIGD2BQ4VC39 106 aa9.2□□□□□ -0.94
SMARCE1-209ENST00000478349 ALKAL2Q6UX46 152 aa9.2□□□□□ -0.94
SMARCE1-209ENST00000478349 SMIM7Q9BQ49 75 aa9.2□□□□□ -0.94
SMARCE1-209ENST00000478349 EIF5A2Q9GZV4 153 aaKnown RBP9.2□□□□□ -0.94
SMARCE1-209ENST00000478349 PLAC8Q9NZF1 115 aa9.2□□□□□ -0.94
SMARCE1-209ENST00000478349 CHTF8P0CG12 524 aa9.19□□□□□ -0.94
SMARCE1-209ENST00000478349 SS18Q15532 418 aa9.19□□□□□ -0.94
SMARCE1-209ENST00000478349 TSKUQ8WUA8 353 aa9.19□□□□□ -0.94
SMARCE1-209ENST00000478349 HIGD1CA8MV81 97 aa9.18□□□□□ -0.94
SMARCE1-209ENST00000478349 SLPIP03973 132 aa9.18□□□□□ -0.94
SMARCE1-209ENST00000478349 XCL1P47992 114 aa9.18□□□□□ -0.94
SMARCE1-209ENST00000478349 COX6A2Q02221 97 aa9.18□□□□□ -0.94
SMARCE1-209ENST00000478349 MAJINQ3KP22 176 aa9.18□□□□□ -0.94
SMARCE1-209ENST00000478349 TMEM191AQ9H0A3 160 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms