RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 TCAPO15273 167 aa11.1□□□□□ -0.63
VHL-203ENST00000477538 PLECQ15149 4684 aaKnown RBP11.1□□□□□ -0.63
VHL-203ENST00000477538 LGALS9CQ6DKI2 356 aa11.09□□□□□ -0.63
VHL-203ENST00000477538 UPK3BQ9BT76 320 aa11.09□□□□□ -0.63
VHL-203ENST00000477538 TMEM243Q9BU79 118 aa11.09□□□□□ -0.63
VHL-203ENST00000477538 FA2HQ7L5A8 372 aa11.08□□□□□ -0.64
VHL-203ENST00000477538 WFDC10BQ8IUB3 73 aa11.08□□□□□ -0.64
VHL-203ENST00000477538 CHCHD5Q9BSY4 110 aa11.08□□□□□ -0.64
VHL-203ENST00000477538 CHCHD7Q9BUK0 85 aa11.08□□□□□ -0.64
VHL-203ENST00000477538 C1orf196B1AJZ1 125 aa11.07□□□□□ -0.64
VHL-203ENST00000477538 K7EMI3 77 aa11.07□□□□□ -0.64
VHL-203ENST00000477538 ESDP10768 282 aa11.07□□□□□ -0.64
VHL-203ENST00000477538 LINC00476Q8WZB0 136 aa11.07□□□□□ -0.64
VHL-203ENST00000477538 LINC01546A6NGU7 62 aa11.06□□□□□ -0.64
VHL-203ENST00000477538 UBE2L6O14933 153 aa11.06□□□□□ -0.64
VHL-203ENST00000477538 HIST1H2BKO60814 126 aa11.06□□□□□ -0.64
VHL-203ENST00000477538 HIST1H2BJP06899 126 aa11.06□□□□□ -0.64
VHL-203ENST00000477538 HIST1H2BOP23527 126 aa11.06□□□□□ -0.64
VHL-203ENST00000477538 HIST1H2BBP33778 126 aa11.06□□□□□ -0.64
VHL-203ENST00000477538 HIST1H2BDP58876 126 aa11.06□□□□□ -0.64
VHL-203ENST00000477538 RAB5BP61020 215 aa11.06□□□□□ -0.64
VHL-203ENST00000477538 HIST1H2BCP62807 126 aa11.06□□□□□ -0.64
VHL-203ENST00000477538 Q0VG73 95 aa11.06□□□□□ -0.64
VHL-203ENST00000477538 LAGE3Q14657 143 aa11.06□□□□□ -0.64
VHL-203ENST00000477538 HIST2H2BEQ16778 126 aa11.06□□□□□ -0.64
VHL-203ENST00000477538 ORMDL2Q53FV1 153 aa11.06□□□□□ -0.64
VHL-203ENST00000477538 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.06□□□□□ -0.64
VHL-203ENST00000477538 HIST1H2BHQ93079 126 aa11.06□□□□□ -0.64
VHL-203ENST00000477538 URB1-AS1Q96HZ7 61 aa11.06□□□□□ -0.64
VHL-203ENST00000477538 HIST1H2BNQ99877 126 aa11.06□□□□□ -0.64
VHL-203ENST00000477538 HIST1H2BMQ99879 126 aa11.06□□□□□ -0.64
VHL-203ENST00000477538 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.05□□□□□ -0.64
VHL-203ENST00000477538 IGKV2-29A2NJV5 120 aaPredicted RBP11.05□□□□□ -0.64
VHL-203ENST00000477538 SIVA1O15304 175 aa11.05□□□□□ -0.64
VHL-203ENST00000477538 LY6G6CO95867 125 aa11.05□□□□□ -0.64
VHL-203ENST00000477538 GAGE6Q13070 117 aa11.05□□□□□ -0.64
VHL-203ENST00000477538 RNASEKQ6P5S7 137 aaKnown RBP11.05□□□□□ -0.64
VHL-203ENST00000477538 NIT1Q86X76 327 aa11.05□□□□□ -0.64
VHL-203ENST00000477538 BAGE3Q86Y29 109 aa11.05□□□□□ -0.64
VHL-203ENST00000477538 AP5S1Q9NUS5 200 aa11.05□□□□□ -0.64
VHL-203ENST00000477538 LINC00614P0C842 121 aa11.04□□□□□ -0.64
VHL-203ENST00000477538 PKIAP61925 76 aa11.04□□□□□ -0.64
VHL-203ENST00000477538 C20orf203Q8NBC4 194 aa11.04□□□□□ -0.64
VHL-203ENST00000477538 Q9H8V8 135 aa11.04□□□□□ -0.64
VHL-203ENST00000477538 TMEM262E9PQX1 116 aa11.03□□□□□ -0.64
VHL-203ENST00000477538 H7C423 109 aa11.03□□□□□ -0.64
VHL-203ENST00000477538 TMEM18Q96B42 140 aa11.03□□□□□ -0.64
VHL-203ENST00000477538 A0A087WX48 190 aa11.02□□□□□ -0.65
VHL-203ENST00000477538 IGHV3-30P01768 117 aa11.02□□□□□ -0.65
VHL-203ENST00000477538 IGHV3-33P01772 117 aa11.02□□□□□ -0.65
VHL-203ENST00000477538 DNAH10OSP0CZ25 163 aa11.02□□□□□ -0.65
VHL-203ENST00000477538 IGHV3-30-3P0DP02 117 aa11.02□□□□□ -0.65
VHL-203ENST00000477538 IGHV3-30-5P0DP03 117 aa11.02□□□□□ -0.65
VHL-203ENST00000477538 MPV17L2Q567V2 206 aa11.02□□□□□ -0.65
VHL-203ENST00000477538 LINC01556Q5JQF7 62 aa11.02□□□□□ -0.65
VHL-203ENST00000477538 AMMECR1LQ6DCA0 310 aa11.02□□□□□ -0.65
VHL-203ENST00000477538 Q8N3U1 123 aa11.02□□□□□ -0.65
VHL-203ENST00000477538 CHCHD1Q96BP2 118 aaKnown RBP11.02□□□□□ -0.65
VHL-203ENST00000477538 FGF6P10767 208 aa11.01□□□□□ -0.65
VHL-203ENST00000477538 BTF3P20290 206 aaKnown RBP11.01□□□□□ -0.65
VHL-203ENST00000477538 RPL39P62891 51 aaKnown RBP11.01□□□□□ -0.65
VHL-203ENST00000477538 LYSTQ99698 3801 aa11.01□□□□□ -0.65
VHL-203ENST00000477538 SERF1AO75920 110 aa11□□□□□ -0.65
VHL-203ENST00000477538 G0S2P27469 103 aa11□□□□□ -0.65
VHL-203ENST00000477538 SMAGPQ0VAQ4 97 aa11□□□□□ -0.65
VHL-203ENST00000477538 C2orf66Q6UXQ4 117 aa11□□□□□ -0.65
VHL-203ENST00000477538 CYSLTR1Q9Y271 337 aa11□□□□□ -0.65
VHL-203ENST00000477538 ALMS1Q8TCU4 4167 aa11□□□□□ -0.65
VHL-203ENST00000477538 ZNF25P17030 456 aaPredicted RBP10.99□□□□□ -0.65
VHL-203ENST00000477538 LINC00310P59036 64 aa10.99□□□□□ -0.65
VHL-203ENST00000477538 RBX1P62877 108 aa10.99□□□□□ -0.65
VHL-203ENST00000477538 MRPL52Q86TS9 123 aaKnown RBP10.99□□□□□ -0.65
VHL-203ENST00000477538 Q8N976 141 aa10.99□□□□□ -0.65
VHL-203ENST00000477538 UBE2D4Q9Y2X8 147 aa10.99□□□□□ -0.65
VHL-203ENST00000477538 LCE6AA0A183 80 aa10.98□□□□□ -0.65
VHL-203ENST00000477538 A0A1B0GUV1 79 aa10.98□□□□□ -0.65
VHL-203ENST00000477538 HSBP1O75506 76 aa10.98□□□□□ -0.65
VHL-203ENST00000477538 PMCHL1Q16048 86 aa10.98□□□□□ -0.65
VHL-203ENST00000477538 TOMM6Q96B49 74 aa10.98□□□□□ -0.65
VHL-203ENST00000477538 TMEM101Q96IK0 257 aa10.98□□□□□ -0.65
VHL-203ENST00000477538 TIMM21Q9BVV7 248 aa10.98□□□□□ -0.65
VHL-203ENST00000477538 IGLV4-60A0A075B6I1 120 aa10.97□□□□□ -0.65
VHL-203ENST00000477538 A0A096LNJ9 63 aa10.97□□□□□ -0.65
VHL-203ENST00000477538 NDUFA6P56556 154 aa10.97□□□□□ -0.65
VHL-203ENST00000477538 DGAT2L7PQ6IED9 249 aa10.97□□□□□ -0.65
VHL-203ENST00000477538 OR5A1Q8NGJ0 315 aa10.97□□□□□ -0.65
VHL-203ENST00000477538 SPANXA1Q9NS26 97 aa10.97□□□□□ -0.65
VHL-203ENST00000477538 VPS13DQ5THJ4 4388 aa10.97□□□□□ -0.65
VHL-203ENST00000477538 TRAV9-2A0A087WT02 112 aa10.96□□□□□ -0.65
VHL-203ENST00000477538 NBDYA0A0U1RRE5 68 aa10.96□□□□□ -0.65
VHL-203ENST00000477538 LINC01549A6NIU2 74 aa10.96□□□□□ -0.65
VHL-203ENST00000477538 NUPR1O60356 82 aa10.96□□□□□ -0.65
VHL-203ENST00000477538 HBDP02042 147 aa10.96□□□□□ -0.65
VHL-203ENST00000477538 ANGP03950 147 aaKnown RBP10.96□□□□□ -0.65
VHL-203ENST00000477538 C10orf126Q8N4M7 172 aa10.96□□□□□ -0.65
VHL-203ENST00000477538 KLK12Q9UKR0 248 aa10.96□□□□□ -0.65
VHL-203ENST00000477538 CSDC2Q9Y534 153 aaKnown RBP10.96□□□□□ -0.65
VHL-203ENST00000477538 K7EP13 123 aa10.95□□□□□ -0.66
VHL-203ENST00000477538 TTC32Q5I0X7 151 aa10.95□□□□□ -0.66
VHL-203ENST00000477538 COA6Q5JTJ3 125 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms