RNA–Protein interactions for RNA: ENST00000477523.1

RGPD5-209, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 1 (best)

Gene RGPD5, Length 6,902 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-209ENST00000477523 RPL39P62891 51 aaKnown RBP3.27□□□□□ -1.89
RGPD5-209ENST00000477523 TMEM243Q9BU79 118 aa3.27□□□□□ -1.89
RGPD5-209ENST00000477523 OTOGQ6ZRI0 2925 aa3.27□□□□□ -1.89
RGPD5-209ENST00000477523 IGKV3OR2-268A0A0C4DH90 116 aa3.27□□□□□ -1.89
RGPD5-209ENST00000477523 A0A0J9YY99 117 aa3.27□□□□□ -1.89
RGPD5-209ENST00000477523 M0R143 59 aa3.27□□□□□ -1.89
RGPD5-209ENST00000477523 GYPEP15421 78 aa3.27□□□□□ -1.89
RGPD5-209ENST00000477523 DAZ4Q86SG3 579 aaKnown RBP3.27□□□□□ -1.89
RGPD5-209ENST00000477523 DAZ3Q9NR90 486 aaKnown RBP3.27□□□□□ -1.89
RGPD5-209ENST00000477523 A0A087WX48 190 aa3.27□□□□□ -1.89
RGPD5-209ENST00000477523 ATP6V0E2Q8NHE4 81 aa3.27□□□□□ -1.89
RGPD5-209ENST00000477523 SPANXA1Q9NS26 97 aa3.27□□□□□ -1.89
RGPD5-209ENST00000477523 DKK2Q9UBU2 259 aa3.27□□□□□ -1.89
RGPD5-209ENST00000477523 PRSS29PA6NIE9 313 aa3.27□□□□□ -1.89
RGPD5-209ENST00000477523 SEC11AP67812 179 aa3.27□□□□□ -1.89
RGPD5-209ENST00000477523 ZNF575Q86XF7 245 aa3.27□□□□□ -1.89
RGPD5-209ENST00000477523 MRAPQ8TCY5 172 aa3.27□□□□□ -1.89
RGPD5-209ENST00000477523 OVOL2Q9BRP0 275 aa3.27□□□□□ -1.89
RGPD5-209ENST00000477523 HHLA3Q9XRX5 114 aa3.27□□□□□ -1.89
RGPD5-209ENST00000477523 A0A096LNJ9 63 aa3.27□□□□□ -1.89
RGPD5-209ENST00000477523 TRAV12-1A0A0B4J245 112 aa3.27□□□□□ -1.89
RGPD5-209ENST00000477523 GIG44P09565 113 aaPredicted RBP3.27□□□□□ -1.89
RGPD5-209ENST00000477523 POM121L12Q8N7R1 296 aa3.27□□□□□ -1.89
RGPD5-209ENST00000477523 SPATA25Q9BR10 227 aa3.27□□□□□ -1.89
RGPD5-209ENST00000477523 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.26□□□□□ -1.89
RGPD5-209ENST00000477523 IGKV2-29A2NJV5 120 aaPredicted RBP3.26□□□□□ -1.89
RGPD5-209ENST00000477523 LINC00587B1AMM8 73 aa3.26□□□□□ -1.89
RGPD5-209ENST00000477523 H3BRM9 83 aa3.26□□□□□ -1.89
RGPD5-209ENST00000477523 STPG4Q8N801 248 aa3.26□□□□□ -1.89
RGPD5-209ENST00000477523 SPATA3Q8NHX4 192 aa3.26□□□□□ -1.89
RGPD5-209ENST00000477523 RNF183Q96D59 192 aa3.26□□□□□ -1.89
RGPD5-209ENST00000477523 CHAC1Q9BUX1 264 aa3.26□□□□□ -1.89
RGPD5-209ENST00000477523 X6R8D5 127 aa3.26□□□□□ -1.89
RGPD5-209ENST00000477523 LGALS3P17931 250 aaKnown RBP3.26□□□□□ -1.89
RGPD5-209ENST00000477523 IGLV2-18A0A075B6J9 118 aa3.26□□□□□ -1.89
RGPD5-209ENST00000477523 PRB2P02812 416 aaPredicted RBP3.26□□□□□ -1.89
RGPD5-209ENST00000477523 IGLC3P0DOY3 106 aa3.26□□□□□ -1.89
RGPD5-209ENST00000477523 A0A096LPF7 62 aa3.26□□□□□ -1.89
RGPD5-209ENST00000477523 WIPF1O43516 503 aa3.26□□□□□ -1.89
RGPD5-209ENST00000477523 TSHBP01222 138 aa3.26□□□□□ -1.89
RGPD5-209ENST00000477523 MRPL23Q16540 153 aaKnown RBP3.26□□□□□ -1.89
RGPD5-209ENST00000477523 NF1P21359 2839 aa3.26□□□□□ -1.89
RGPD5-209ENST00000477523 TRAV13-1A0A0B4J241 112 aa3.26□□□□□ -1.89
RGPD5-209ENST00000477523 MAJINQ3KP22 176 aa3.26□□□□□ -1.89
RGPD5-209ENST00000477523 LINC00469Q8N7U9 141 aa3.26□□□□□ -1.89
RGPD5-209ENST00000477523 GAGE6Q13070 117 aa3.26□□□□□ -1.89
RGPD5-209ENST00000477523 CSNK1G2-AS1Q8NCQ2 148 aa3.26□□□□□ -1.89
RGPD5-209ENST00000477523 ZMAT4Q9H898 229 aa3.26□□□□□ -1.89
RGPD5-209ENST00000477523 EDA2RQ9HAV5 297 aa3.26□□□□□ -1.89
RGPD5-209ENST00000477523 NOTCH1P46531 2555 aa3.25□□□□□ -1.89
RGPD5-209ENST00000477523 G3V4G9 280 aa3.25□□□□□ -1.89
RGPD5-209ENST00000477523 UBE2D3P61077 147 aa3.25□□□□□ -1.89
RGPD5-209ENST00000477523 UBE2D2P62837 147 aa3.25□□□□□ -1.89
RGPD5-209ENST00000477523 FGF6P10767 208 aa3.25□□□□□ -1.89
RGPD5-209ENST00000477523 ODF1Q14990 250 aa3.25□□□□□ -1.89
RGPD5-209ENST00000477523 SH2D6Q7Z4S9 175 aa3.25□□□□□ -1.89
RGPD5-209ENST00000477523 ICOSQ9Y6W8 199 aa3.25□□□□□ -1.89
RGPD5-209ENST00000477523 A0A0J9YXV3 536 aa3.25□□□□□ -1.89
RGPD5-209ENST00000477523 CTAG1AP78358 180 aa3.25□□□□□ -1.89
RGPD5-209ENST00000477523 HINT1P49773 126 aaPredicted RBP3.25□□□□□ -1.89
RGPD5-209ENST00000477523 PTTG1IPP53801 180 aa3.25□□□□□ -1.89
RGPD5-209ENST00000477523 SRSF9Q13242 221 aaKnown RBP eCLIP3.25□□□□□ -1.89
RGPD5-209ENST00000477523 Q6ZSN1 163 aa3.25□□□□□ -1.89
RGPD5-209ENST00000477523 BAALCQ8WXS3 180 aa3.25□□□□□ -1.89
RGPD5-209ENST00000477523 OPRPNQ99935 248 aaPredicted RBP3.24□□□□□ -1.89
RGPD5-209ENST00000477523 RETNQ9HD89 108 aa3.24□□□□□ -1.89
RGPD5-209ENST00000477523 TRAV26-1A0A087WT03 109 aa3.24□□□□□ -1.89
RGPD5-209ENST00000477523 ANKRD39Q53RE8 183 aa3.24□□□□□ -1.89
RGPD5-209ENST00000477523 RNASE13Q5GAN3 156 aaKnown RBP3.24□□□□□ -1.89
RGPD5-209ENST00000477523 CEMP1Q6PRD7 247 aaPredicted RBP3.24□□□□□ -1.89
RGPD5-209ENST00000477523 ZNF815PA8K554 130 aa3.24□□□□□ -1.89
RGPD5-209ENST00000477523 C11orf45Q8TAV5 145 aa3.24□□□□□ -1.89
RGPD5-209ENST00000477523 PLEKHB2Q96CS7 222 aa3.24□□□□□ -1.89
RGPD5-209ENST00000477523 CST9LQ9H4G1 147 aa3.24□□□□□ -1.89
RGPD5-209ENST00000477523 PYGO1Q9Y3Y4 419 aa3.24□□□□□ -1.89
RGPD5-209ENST00000477523 FHL2Q14192 279 aa3.24□□□□□ -1.89
RGPD5-209ENST00000477523 LINC01546A6NGU7 62 aa3.24□□□□□ -1.89
RGPD5-209ENST00000477523 CRYBA4P53673 196 aa3.24□□□□□ -1.89
RGPD5-209ENST00000477523 IL17DQ8TAD2 202 aa3.24□□□□□ -1.89
RGPD5-209ENST00000477523 TIMM21Q9BVV7 248 aa3.24□□□□□ -1.89
RGPD5-209ENST00000477523 LOC100131303A0A0U1RQF7 123 aa3.23□□□□□ -1.89
RGPD5-209ENST00000477523 EGFEM1PQ0D2K5 195 aa3.23□□□□□ -1.89
RGPD5-209ENST00000477523 Q8N976 141 aa3.23□□□□□ -1.89
RGPD5-209ENST00000477523 VSIG2Q96IQ7 327 aa3.23□□□□□ -1.89
RGPD5-209ENST00000477523 A6NDN8 102 aa3.23□□□□□ -1.89
RGPD5-209ENST00000477523 COX8AP10176 69 aa3.23□□□□□ -1.89
RGPD5-209ENST00000477523 GCSHP23434 173 aa3.23□□□□□ -1.89
RGPD5-209ENST00000477523 IGLV4-3A0A075B6K6 122 aa3.23□□□□□ -1.89
RGPD5-209ENST00000477523 PLAC8L1A1L4L8 177 aa3.23□□□□□ -1.89
RGPD5-209ENST00000477523 C11orf86A6NJI1 115 aa3.23□□□□□ -1.89
RGPD5-209ENST00000477523 CRPP02741 224 aa3.23□□□□□ -1.89
RGPD5-209ENST00000477523 KRTAP10-11P60412 298 aa3.23□□□□□ -1.89
RGPD5-209ENST00000477523 GTSF1LQ9H1H1 148 aa3.23□□□□□ -1.89
RGPD5-209ENST00000477523 NIPBLQ6KC79 2804 aaeCLIP3.23□□□□□ -1.89
RGPD5-209ENST00000477523 IGHV3-64A0A075B6Q5 118 aa3.23□□□□□ -1.89
RGPD5-209ENST00000477523 IGIPA6NJ69 53 aa3.23□□□□□ -1.89
RGPD5-209ENST00000477523 ZNF25P17030 456 aaPredicted RBP3.23□□□□□ -1.89
RGPD5-209ENST00000477523 LBHQ53QV2 105 aaPredicted RBP3.23□□□□□ -1.89
RGPD5-209ENST00000477523 HERVK_113P63121 156 aa3.23□□□□□ -1.89
RGPD5-209ENST00000477523 COL5A1-AS1Q5SY13 56 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms