RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 GFRA4Q9GZZ7 299 aa7.27□□□□□ -1.25
HDLBP-236ENST00000477477 TRBV20OR9-2A0A075B6H5 130 aa7.26□□□□□ -1.25
HDLBP-236ENST00000477477 RAB5CP51148 216 aa7.26□□□□□ -1.25
HDLBP-236ENST00000477477 DPH3P1Q9H4G8 78 aa7.26□□□□□ -1.25
HDLBP-236ENST00000477477 NIT2Q9NQR4 276 aa7.26□□□□□ -1.25
HDLBP-236ENST00000477477 PLA2G2DQ9UNK4 145 aa7.26□□□□□ -1.25
HDLBP-236ENST00000477477 IGHV3-64A0A075B6Q5 118 aa7.25□□□□□ -1.25
HDLBP-236ENST00000477477 TEX46H3BTG2 121 aa7.25□□□□□ -1.25
HDLBP-236ENST00000477477 PDE6DO43924 150 aa7.25□□□□□ -1.25
HDLBP-236ENST00000477477 IFNA1P01562 189 aa7.25□□□□□ -1.25
HDLBP-236ENST00000477477 NTF3P20783 257 aa7.25□□□□□ -1.25
HDLBP-236ENST00000477477 S100A12P80511 92 aa7.25□□□□□ -1.25
HDLBP-236ENST00000477477 MEF2BQ02080 365 aaPredicted RBP7.25□□□□□ -1.25
HDLBP-236ENST00000477477 COTL1Q14019 142 aa7.25□□□□□ -1.25
HDLBP-236ENST00000477477 LYZL1Q6UWQ5 148 aa7.25□□□□□ -1.25
HDLBP-236ENST00000477477 AP5S1Q9NUS5 200 aa7.25□□□□□ -1.25
HDLBP-236ENST00000477477 UBR4Q5T4S7 5183 aa7.25□□□□□ -1.25
HDLBP-236ENST00000477477 UBE2L6O14933 153 aa7.24□□□□□ -1.25
HDLBP-236ENST00000477477 SLPIP03973 132 aa7.24□□□□□ -1.25
HDLBP-236ENST00000477477 CTRLP40313 264 aa7.24□□□□□ -1.25
HDLBP-236ENST00000477477 AMTP48728 403 aa7.24□□□□□ -1.25
HDLBP-236ENST00000477477 SULT1A2P50226 295 aa7.24□□□□□ -1.25
HDLBP-236ENST00000477477 EIF5AL1Q6IS14 154 aaKnown RBP7.24□□□□□ -1.25
HDLBP-236ENST00000477477 WDR73Q6P4I2 378 aa7.24□□□□□ -1.25
HDLBP-236ENST00000477477 C9orf62Q8N4C0 152 aa7.24□□□□□ -1.25
HDLBP-236ENST00000477477 BIN3Q9NQY0 253 aa7.24□□□□□ -1.25
HDLBP-236ENST00000477477 MED9Q9NWA0 146 aa7.24□□□□□ -1.25
HDLBP-236ENST00000477477 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.23□□□□□ -1.25
HDLBP-236ENST00000477477 LOC105371267A0A1B0GV96 52 aa7.23□□□□□ -1.25
HDLBP-236ENST00000477477 CHTF8P0CG12 524 aa7.23□□□□□ -1.25
HDLBP-236ENST00000477477 BCL2P10415 239 aa7.23□□□□□ -1.25
HDLBP-236ENST00000477477 SPACA4Q8TDM5 124 aa7.23□□□□□ -1.25
HDLBP-236ENST00000477477 RNF185Q96GF1 192 aa7.23□□□□□ -1.25
HDLBP-236ENST00000477477 CNFNQ9BYD5 112 aa7.23□□□□□ -1.25
HDLBP-236ENST00000477477 A0A087WYN8 130 aa7.22□□□□□ -1.25
HDLBP-236ENST00000477477 MT1HL1P0DM35 61 aa7.22□□□□□ -1.25
HDLBP-236ENST00000477477 Q6ZRU5 148 aa7.22□□□□□ -1.25
HDLBP-236ENST00000477477 C15orf56Q8N910 161 aa7.22□□□□□ -1.25
HDLBP-236ENST00000477477 GATD1Q8NB37 220 aa7.22□□□□□ -1.25
HDLBP-236ENST00000477477 NUDT10Q8NFP7 164 aa7.22□□□□□ -1.25
HDLBP-236ENST00000477477 NUDT11Q96G61 164 aa7.22□□□□□ -1.25
HDLBP-236ENST00000477477 GAGE12HA6NDE8 117 aa7.21□□□□□ -1.26
HDLBP-236ENST00000477477 TWIST1Q15672 202 aa7.21□□□□□ -1.26
HDLBP-236ENST00000477477 RPP21Q9H633 154 aaKnown RBP7.21□□□□□ -1.26
HDLBP-236ENST00000477477 TRAV26-2A0A0B4J265 109 aa7.2□□□□□ -1.26
HDLBP-236ENST00000477477 S100A6P06703 90 aa7.2□□□□□ -1.26
HDLBP-236ENST00000477477 CFAP161Q6P656 301 aa7.2□□□□□ -1.26
HDLBP-236ENST00000477477 DPH3Q96FX2 82 aa7.2□□□□□ -1.26
HDLBP-236ENST00000477477 RNASE7Q9H1E1 156 aaKnown RBP7.2□□□□□ -1.26
HDLBP-236ENST00000477477 PLAC8Q9NZF1 115 aa7.2□□□□□ -1.26
HDLBP-236ENST00000477477 IGKV3OR2-268A0A0C4DH90 116 aa7.19□□□□□ -1.26
HDLBP-236ENST00000477477 K7EN84 100 aa7.19□□□□□ -1.26
HDLBP-236ENST00000477477 NCR2O95944 276 aa7.19□□□□□ -1.26
HDLBP-236ENST00000477477 TAGLN2P37802 199 aaKnown RBP7.19□□□□□ -1.26
HDLBP-236ENST00000477477 HIGD2BQ4VC39 106 aa7.19□□□□□ -1.26
HDLBP-236ENST00000477477 RPS10P46783 165 aaKnown RBP7.18□□□□□ -1.26
HDLBP-236ENST00000477477 COX6A2Q02221 97 aa7.18□□□□□ -1.26
HDLBP-236ENST00000477477 AMMECR1LQ6DCA0 310 aa7.18□□□□□ -1.26
HDLBP-236ENST00000477477 GTSF1Q8WW33 167 aa7.18□□□□□ -1.26
HDLBP-236ENST00000477477 RPL39LQ96EH5 51 aaKnown RBP7.18□□□□□ -1.26
HDLBP-236ENST00000477477 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.17□□□□□ -1.26
HDLBP-236ENST00000477477 GVQW2A0A096LPI5 108 aaPredicted RBP7.17□□□□□ -1.26
HDLBP-236ENST00000477477 IGKV2-29A2NJV5 120 aaPredicted RBP7.17□□□□□ -1.26
HDLBP-236ENST00000477477 H7C423 109 aa7.17□□□□□ -1.26
HDLBP-236ENST00000477477 PHOX2AO14813 284 aa7.17□□□□□ -1.26
HDLBP-236ENST00000477477 NDUFS6O75380 124 aaKnown RBP7.17□□□□□ -1.26
HDLBP-236ENST00000477477 APCSP02743 223 aa7.17□□□□□ -1.26
HDLBP-236ENST00000477477 RNASEKQ6P5S7 137 aaKnown RBP7.17□□□□□ -1.26
HDLBP-236ENST00000477477 SMIM15Q7Z3B0 74 aa7.17□□□□□ -1.26
HDLBP-236ENST00000477477 TCTE3Q8IZS6 198 aa7.17□□□□□ -1.26
HDLBP-236ENST00000477477 OCC1Q8TAD7 63 aa7.17□□□□□ -1.26
HDLBP-236ENST00000477477 C7orf33Q8WU49 177 aa7.17□□□□□ -1.26
HDLBP-236ENST00000477477 CHCHD10Q8WYQ3 142 aaPredicted RBP7.17□□□□□ -1.26
HDLBP-236ENST00000477477 TMA7Q9Y2S6 64 aaKnown RBP7.17□□□□□ -1.26
HDLBP-236ENST00000477477 SDHAF1A6NFY7 115 aa7.16□□□□□ -1.26
HDLBP-236ENST00000477477 FGF6P10767 208 aa7.16□□□□□ -1.26
HDLBP-236ENST00000477477 FOXA3P55318 350 aaPredicted RBP7.16□□□□□ -1.26
HDLBP-236ENST00000477477 FOXI1Q12951 378 aa7.16□□□□□ -1.26
HDLBP-236ENST00000477477 MAJINQ3KP22 176 aa7.16□□□□□ -1.26
HDLBP-236ENST00000477477 TEX261Q6UWH6 196 aa7.16□□□□□ -1.26
HDLBP-236ENST00000477477 PRSS3P2Q8NHM4 247 aa7.16□□□□□ -1.26
HDLBP-236ENST00000477477 IGKV2-24A0A0C4DH68 120 aa7.15□□□□□ -1.26
HDLBP-236ENST00000477477 ZNF25P17030 456 aaPredicted RBP7.15□□□□□ -1.26
HDLBP-236ENST00000477477 LINC00469Q8N7U9 141 aa7.15□□□□□ -1.26
HDLBP-236ENST00000477477 OR5A1Q8NGJ0 315 aa7.15□□□□□ -1.26
HDLBP-236ENST00000477477 TRBV6-5A0A0K0K1A5 114 aa7.14□□□□□ -1.27
HDLBP-236ENST00000477477 GATCO43716 136 aaKnown RBP7.14□□□□□ -1.27
HDLBP-236ENST00000477477 PRR3P79522 188 aaKnown RBP7.14□□□□□ -1.27
HDLBP-236ENST00000477477 FAM231DQ6ZW35 169 aa7.14□□□□□ -1.27
HDLBP-236ENST00000477477 A0A096LNI7 61 aa7.13□□□□□ -1.27
HDLBP-236ENST00000477477 FAM231BA6NCW3 169 aa7.13□□□□□ -1.27
HDLBP-236ENST00000477477 A8MWL6 223 aa7.13□□□□□ -1.27
HDLBP-236ENST00000477477 TMEM250H0YL14 139 aa7.13□□□□□ -1.27
HDLBP-236ENST00000477477 I3L3M4 83 aa7.13□□□□□ -1.27
HDLBP-236ENST00000477477 PMCHP20382 165 aa7.13□□□□□ -1.27
HDLBP-236ENST00000477477 XCL1P47992 114 aa7.13□□□□□ -1.27
HDLBP-236ENST00000477477 IFITM2Q01629 132 aa7.13□□□□□ -1.27
HDLBP-236ENST00000477477 STPG4Q8N801 248 aa7.13□□□□□ -1.27
HDLBP-236ENST00000477477 BTF3L4Q96K17 158 aa7.13□□□□□ -1.27
HDLBP-236ENST00000477477 LRP2P98164 4655 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms