RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 MIAQ16674 131 aa14.05□□□□□ -0.16
VARS2-209ENST00000477288 FAM19A5Q7Z5A7 132 aaPredicted RBP14.05□□□□□ -0.16
VARS2-209ENST00000477288 MPLKIPQ8TAP9 179 aa14.05□□□□□ -0.16
VARS2-209ENST00000477288 CHD3Q12873 2000 aaKnown RBP14.05□□□□□ -0.16
VARS2-209ENST00000477288 LYPD6Q86Y78 171 aa14.04□□□□□ -0.16
VARS2-209ENST00000477288 CHCHD10Q8WYQ3 142 aaPredicted RBP14.04□□□□□ -0.16
VARS2-209ENST00000477288 C2orf16Q68DN1 1984 aa14.04□□□□□ -0.16
VARS2-209ENST00000477288 PDE6GP18545 87 aa14.04□□□□□ -0.16
VARS2-209ENST00000477288 LMO4P61968 165 aa14.03□□□□□ -0.16
VARS2-209ENST00000477288 TAX1BP3O14907 124 aa14.03□□□□□ -0.16
VARS2-209ENST00000477288 FRMD6-AS1P0C7T7 363 aa14.03□□□□□ -0.16
VARS2-209ENST00000477288 WFDC10BQ8IUB3 73 aa14.03□□□□□ -0.16
VARS2-209ENST00000477288 PLA2G2EQ9NZK7 142 aa14.02□□□□□ -0.16
VARS2-209ENST00000477288 IGLV2-14P01704 120 aa14.02□□□□□ -0.16
VARS2-209ENST00000477288 LINC00482Q8N8I6 264 aa14.02□□□□□ -0.17
VARS2-209ENST00000477288 LYRM9A8MSI8 78 aa14.02□□□□□ -0.17
VARS2-209ENST00000477288 SLPIP03973 132 aa14.02□□□□□ -0.17
VARS2-209ENST00000477288 KIR2DL5BQ8NHK3 375 aa14.02□□□□□ -0.17
VARS2-209ENST00000477288 LTBP2Q14767 1821 aa14.01□□□□□ -0.17
VARS2-209ENST00000477288 C3orf22Q8N5N4 141 aa14.01□□□□□ -0.17
VARS2-209ENST00000477288 CSPG4Q6UVK1 2322 aa14.01□□□□□ -0.17
VARS2-209ENST00000477288 A0A0J9YWU9 116 aa14.01□□□□□ -0.17
VARS2-209ENST00000477288 TCL1BO95988 128 aa14.01□□□□□ -0.17
VARS2-209ENST00000477288 COA6Q5JTJ3 125 aaKnown RBP14.01□□□□□ -0.17
VARS2-209ENST00000477288 A0A0J9YXY3 114 aa14□□□□□ -0.17
VARS2-209ENST00000477288 MLST8Q9BVC4 326 aa14□□□□□ -0.17
VARS2-209ENST00000477288 SHISA2Q6UWI4 295 aa14□□□□□ -0.17
VARS2-209ENST00000477288 FREM1Q5H8C1 2179 aa14□□□□□ -0.17
VARS2-209ENST00000477288 LINC00467Q9BRT7 94 aa13.99□□□□□ -0.17
VARS2-209ENST00000477288 OTOGLQ3ZCN5 2332 aa13.99□□□□□ -0.17
VARS2-209ENST00000477288 ODF3BA8MYP8 253 aa13.99□□□□□ -0.17
VARS2-209ENST00000477288 K7ERS5 55 aa13.99□□□□□ -0.17
VARS2-209ENST00000477288 ATRXP46100 2492 aa13.99□□□□□ -0.17
VARS2-209ENST00000477288 HIST2H2BDQ6DRA6 164 aa13.99□□□□□ -0.17
VARS2-209ENST00000477288 SDIM1Q6ZPB5 146 aa13.99□□□□□ -0.17
VARS2-209ENST00000477288 PIEZO1Q92508 2521 aa13.99□□□□□ -0.17
VARS2-209ENST00000477288 DEFB114Q30KQ6 69 aa13.99□□□□□ -0.17
VARS2-209ENST00000477288 ZNF80P51504 273 aaPredicted RBP13.99□□□□□ -0.17
VARS2-209ENST00000477288 SMIM9A6NGZ8 99 aa13.98□□□□□ -0.17
VARS2-209ENST00000477288 PRO3102Q9H379 93 aa13.97□□□□□ -0.17
VARS2-209ENST00000477288 HRCT1Q6UXD1 115 aa13.97□□□□□ -0.17
VARS2-209ENST00000477288 DCANP1Q8TF63 244 aa13.97□□□□□ -0.17
VARS2-209ENST00000477288 RNASE8Q8TDE3 154 aaKnown RBP13.97□□□□□ -0.17
VARS2-209ENST00000477288 XAGE1AQ9HD64 81 aa13.96□□□□□ -0.17
VARS2-209ENST00000477288 LINC00643Q86TS7 51 aa13.96□□□□□ -0.17
VARS2-209ENST00000477288 SPINK6Q6UWN8 80 aa13.96□□□□□ -0.18
VARS2-209ENST00000477288 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.96□□□□□ -0.18
VARS2-209ENST00000477288 IGLV2-18A0A075B6J9 118 aa13.95□□□□□ -0.18
VARS2-209ENST00000477288 TEX49A0A1B0GTD5 131 aa13.95□□□□□ -0.18
VARS2-209ENST00000477288 UBE2D1P51668 147 aa13.95□□□□□ -0.18
VARS2-209ENST00000477288 C20orf197Q8N268 126 aa13.95□□□□□ -0.18
VARS2-209ENST00000477288 C19orf71A6NCJ1 209 aa13.95□□□□□ -0.18
VARS2-209ENST00000477288 M0R2N4 97 aa13.95□□□□□ -0.18
VARS2-209ENST00000477288 PPDPFQ9H3Y8 114 aa13.95□□□□□ -0.18
VARS2-209ENST00000477288 LY6G6DO95868 133 aa13.94□□□□□ -0.18
VARS2-209ENST00000477288 C7orf33Q8WU49 177 aa13.94□□□□□ -0.18
VARS2-209ENST00000477288 ENHOQ6UWT2 76 aa13.94□□□□□ -0.18
VARS2-209ENST00000477288 COL4A3Q01955 1670 aa13.94□□□□□ -0.18
VARS2-209ENST00000477288 Q6ZSV7 163 aa13.93□□□□□ -0.18
VARS2-209ENST00000477288 PTPN13Q12923 2485 aa13.93□□□□□ -0.18
VARS2-209ENST00000477288 ZNF843Q8N446 348 aa13.93□□□□□ -0.18
VARS2-209ENST00000477288 G3V4G9 280 aa13.92□□□□□ -0.18
VARS2-209ENST00000477288 K7EQG2 157 aa13.92□□□□□ -0.18
VARS2-209ENST00000477288 IGF1P05019 195 aa13.92□□□□□ -0.18
VARS2-209ENST00000477288 C1orf158Q8N1D5 194 aa13.92□□□□□ -0.18
VARS2-209ENST00000477288 C20orf173Q96LM9 149 aa13.92□□□□□ -0.18
VARS2-209ENST00000477288 CDKN2A-AS1Q9UH64 79 aa13.92□□□□□ -0.18
VARS2-209ENST00000477288 ODF3Q96PU9 254 aa13.92□□□□□ -0.18
VARS2-209ENST00000477288 PIK3CD-AS1Q5SR53 167 aa13.91□□□□□ -0.18
VARS2-209ENST00000477288 TNRC6AQ8NDV7 1962 aaKnown RBP13.91□□□□□ -0.18
VARS2-209ENST00000477288 NEXN-AS1Q8NBZ9 246 aa13.91□□□□□ -0.18
VARS2-209ENST00000477288 UBE2D4Q9Y2X8 147 aa13.91□□□□□ -0.18
VARS2-209ENST00000477288 NCOA6Q14686 2063 aaPredicted RBP13.9□□□□□ -0.18
VARS2-209ENST00000477288 MIFP14174 115 aa13.9□□□□□ -0.18
VARS2-209ENST00000477288 IGKV2-28A0A075B6P5 120 aa13.9□□□□□ -0.18
VARS2-209ENST00000477288 IGKV2D-28P01615 120 aa13.9□□□□□ -0.18
VARS2-209ENST00000477288 SONP18583 2426 aaKnown RBP13.9□□□□□ -0.18
VARS2-209ENST00000477288 C3orf84H3BNL1 204 aa13.9□□□□□ -0.18
VARS2-209ENST00000477288 ADAMTS9Q9P2N4 1935 aa13.9□□□□□ -0.18
VARS2-209ENST00000477288 C10orf99Q6UWK7 81 aa13.89□□□□□ -0.19
VARS2-209ENST00000477288 TNCP24821 2201 aa13.89□□□□□ -0.19
VARS2-209ENST00000477288 TRAV10A0A0B4J240 114 aa13.89□□□□□ -0.19
VARS2-209ENST00000477288 LINC00322Q6ZN03 302 aaPredicted RBP13.89□□□□□ -0.19
VARS2-209ENST00000477288 IGLC6P0CF74 106 aa13.88□□□□□ -0.19
VARS2-209ENST00000477288 LY6G6CO95867 125 aa13.87□□□□□ -0.19
VARS2-209ENST00000477288 SPATA12Q7Z6I5 190 aa13.87□□□□□ -0.19
VARS2-209ENST00000477288 H7C423 109 aa13.87□□□□□ -0.19
VARS2-209ENST00000477288 SYCNQ0VAF6 134 aa13.87□□□□□ -0.19
VARS2-209ENST00000477288 C9orf85Q96MD7 179 aa13.87□□□□□ -0.19
VARS2-209ENST00000477288 FAM236DA0A1B0GTK5 79 aa13.86□□□□□ -0.19
VARS2-209ENST00000477288 FAM236CP0DP71 79 aa13.86□□□□□ -0.19
VARS2-209ENST00000477288 PROK1P58294 105 aa13.86□□□□□ -0.19
VARS2-209ENST00000477288 HIVEP2P31629 2446 aa13.86□□□□□ -0.19
VARS2-209ENST00000477288 TMEM223A0PJW6 202 aa13.86□□□□□ -0.19
VARS2-209ENST00000477288 CCKP06307 115 aa13.86□□□□□ -0.19
VARS2-209ENST00000477288 CFAP126Q5VTH2 177 aa13.85□□□□□ -0.19
VARS2-209ENST00000477288 NCOR2Q9Y618 2525 aa13.85□□□□□ -0.19
VARS2-209ENST00000477288 EP400Q96L91 3159 aa13.85□□□□□ -0.19
VARS2-209ENST00000477288 TRBV6-8A0A0A6YYG3 113 aa13.85□□□□□ -0.19
VARS2-209ENST00000477288 Q8N976 141 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms