RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 ATRAIDQ6UW56 229 aa11.63□□□□□ -0.55
SMARCD3-210ENST00000477169 NRACQ8N912 160 aa11.63□□□□□ -0.55
SMARCD3-210ENST00000477169 SDHAF1A6NFY7 115 aa11.62□□□□□ -0.55
SMARCD3-210ENST00000477169 TMEM97Q5BJF2 176 aa11.62□□□□□ -0.55
SMARCD3-210ENST00000477169 EREGO14944 169 aa11.61□□□□□ -0.55
SMARCD3-210ENST00000477169 CKS2P33552 79 aa11.61□□□□□ -0.55
SMARCD3-210ENST00000477169 LINC01556Q5JQF7 62 aa11.61□□□□□ -0.55
SMARCD3-210ENST00000477169 TMEM136Q6ZRR5 245 aa11.61□□□□□ -0.55
SMARCD3-210ENST00000477169 MAPKAPK5-AS1Q8N8E1 139 aa11.61□□□□□ -0.55
SMARCD3-210ENST00000477169 DEFB104AQ8WTQ1 72 aa11.61□□□□□ -0.55
SMARCD3-210ENST00000477169 ST20Q9HBF5 79 aa11.61□□□□□ -0.55
SMARCD3-210ENST00000477169 PGPEP1Q9NXJ5 209 aa11.61□□□□□ -0.55
SMARCD3-210ENST00000477169 D6R8Y8 96 aa11.6□□□□□ -0.55
SMARCD3-210ENST00000477169 PPP1R17O96001 155 aa11.6□□□□□ -0.55
SMARCD3-210ENST00000477169 POLR2KP53803 58 aaKnown RBP11.6□□□□□ -0.55
SMARCD3-210ENST00000477169 TMEM70Q9BUB7 260 aa11.6□□□□□ -0.55
SMARCD3-210ENST00000477169 PPBPP02775 128 aa11.59□□□□□ -0.55
SMARCD3-210ENST00000477169 COTL1Q14019 142 aa11.59□□□□□ -0.55
SMARCD3-210ENST00000477169 IQCJQ1A5X6 159 aa11.59□□□□□ -0.55
SMARCD3-210ENST00000477169 NIT1Q86X76 327 aa11.59□□□□□ -0.55
SMARCD3-210ENST00000477169 Q8N3U1 123 aa11.59□□□□□ -0.55
SMARCD3-210ENST00000477169 TRBV24-1A0A075B6N3 115 aa11.58□□□□□ -0.56
SMARCD3-210ENST00000477169 TRBV25-1A0A075B6N4 114 aa11.58□□□□□ -0.56
SMARCD3-210ENST00000477169 IGHV1-24A0A0C4DH33 117 aa11.58□□□□□ -0.56
SMARCD3-210ENST00000477169 IGHV3-30P01768 117 aa11.58□□□□□ -0.56
SMARCD3-210ENST00000477169 IGHV3-33P01772 117 aa11.58□□□□□ -0.56
SMARCD3-210ENST00000477169 IGHV3-30-3P0DP02 117 aa11.58□□□□□ -0.56
SMARCD3-210ENST00000477169 IGHV3-30-5P0DP03 117 aa11.58□□□□□ -0.56
SMARCD3-210ENST00000477169 PMCHP20382 165 aa11.58□□□□□ -0.56
SMARCD3-210ENST00000477169 C10orf126Q8N4M7 172 aa11.58□□□□□ -0.56
SMARCD3-210ENST00000477169 TGIF2-C20orf24A0A0A6YYL0 155 aa11.57□□□□□ -0.56
SMARCD3-210ENST00000477169 I3L3M4 83 aa11.57□□□□□ -0.56
SMARCD3-210ENST00000477169 TNFRSF6BO95407 300 aa11.57□□□□□ -0.56
SMARCD3-210ENST00000477169 SUMO2P61956 95 aaKnown RBP11.57□□□□□ -0.56
SMARCD3-210ENST00000477169 ELOBQ15370 118 aa11.57□□□□□ -0.56
SMARCD3-210ENST00000477169 ORMDL3Q8N138 153 aa11.57□□□□□ -0.56
SMARCD3-210ENST00000477169 Q8N1X5 172 aa11.57□□□□□ -0.56
SMARCD3-210ENST00000477169 CHCHD5Q9BSY4 110 aa11.57□□□□□ -0.56
SMARCD3-210ENST00000477169 TRBV27A0A0K0K1C4 114 aa11.56□□□□□ -0.56
SMARCD3-210ENST00000477169 PHOX2AO14813 284 aa11.56□□□□□ -0.56
SMARCD3-210ENST00000477169 NPYP01303 97 aa11.56□□□□□ -0.56
SMARCD3-210ENST00000477169 CDPF1Q6NVV7 123 aa11.56□□□□□ -0.56
SMARCD3-210ENST00000477169 PRELID3AQ96N28 172 aa11.56□□□□□ -0.56
SMARCD3-210ENST00000477169 C20orf78Q9BR46 151 aa11.56□□□□□ -0.56
SMARCD3-210ENST00000477169 TMEM243Q9BU79 118 aa11.56□□□□□ -0.56
SMARCD3-210ENST00000477169 GNB1LQ9BYB4 327 aa11.56□□□□□ -0.56
SMARCD3-210ENST00000477169 A0A087WTM6 91 aa11.55□□□□□ -0.56
SMARCD3-210ENST00000477169 VCYO14598 125 aa11.55□□□□□ -0.56
SMARCD3-210ENST00000477169 TSHBP01222 138 aa11.55□□□□□ -0.56
SMARCD3-210ENST00000477169 HLA-DQA1P01909 254 aa11.55□□□□□ -0.56
SMARCD3-210ENST00000477169 AMTP48728 403 aa11.55□□□□□ -0.56
SMARCD3-210ENST00000477169 YPEL4Q96NS1 127 aa11.55□□□□□ -0.56
SMARCD3-210ENST00000477169 TMEM262E9PQX1 116 aa11.54□□□□□ -0.56
SMARCD3-210ENST00000477169 APCSP02743 223 aa11.54□□□□□ -0.56
SMARCD3-210ENST00000477169 RPL32P62910 135 aaKnown RBP11.54□□□□□ -0.56
SMARCD3-210ENST00000477169 GAGE6Q13070 117 aa11.54□□□□□ -0.56
SMARCD3-210ENST00000477169 COX19Q49B96 90 aa11.54□□□□□ -0.56
SMARCD3-210ENST00000477169 CHCHD7Q9BUK0 85 aa11.54□□□□□ -0.56
SMARCD3-210ENST00000477169 A0A087WX48 190 aa11.53□□□□□ -0.56
SMARCD3-210ENST00000477169 IBA57-AS1B1ANH7 110 aa11.53□□□□□ -0.56
SMARCD3-210ENST00000477169 PKIAP61925 76 aa11.53□□□□□ -0.56
SMARCD3-210ENST00000477169 KIAA1644Q3SXP7 199 aa11.53□□□□□ -0.56
SMARCD3-210ENST00000477169 MPV17L2Q567V2 206 aa11.53□□□□□ -0.56
SMARCD3-210ENST00000477169 CBLN2Q8IUK8 224 aa11.53□□□□□ -0.56
SMARCD3-210ENST00000477169 SMCO4Q9NRQ5 59 aa11.53□□□□□ -0.56
SMARCD3-210ENST00000477169 LAMTOR2Q9Y2Q5 125 aa11.53□□□□□ -0.56
SMARCD3-210ENST00000477169 SMIM2Q9BVW6 85 aa11.52□□□□□ -0.57
SMARCD3-210ENST00000477169 MT-ND6P03923 174 aa11.51□□□□□ -0.57
SMARCD3-210ENST00000477169 ESDP10768 282 aa11.51□□□□□ -0.57
SMARCD3-210ENST00000477169 PRSS47A8MTI9 375 aa11.5□□□□□ -0.57
SMARCD3-210ENST00000477169 FUSP35637 526 aaKnown RBP eCLIP11.5□□□□□ -0.57
SMARCD3-210ENST00000477169 RBX1P62877 108 aa11.5□□□□□ -0.57
SMARCD3-210ENST00000477169 Q8N976 141 aa11.5□□□□□ -0.57
SMARCD3-210ENST00000477169 KIR2DL4Q99706 377 aa11.5□□□□□ -0.57
SMARCD3-210ENST00000477169 MRPL18Q9H0U6 180 aaKnown RBP11.5□□□□□ -0.57
SMARCD3-210ENST00000477169 KLK12Q9UKR0 248 aa11.5□□□□□ -0.57
SMARCD3-210ENST00000477169 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.49□□□□□ -0.57
SMARCD3-210ENST00000477169 IGKV2-29A2NJV5 120 aaPredicted RBP11.49□□□□□ -0.57
SMARCD3-210ENST00000477169 UBE2L6O14933 153 aa11.49□□□□□ -0.57
SMARCD3-210ENST00000477169 FCER1GP30273 86 aa11.49□□□□□ -0.57
SMARCD3-210ENST00000477169 LAGE3Q14657 143 aa11.49□□□□□ -0.57
SMARCD3-210ENST00000477169 MAP1LC3AQ9H492 121 aa11.49□□□□□ -0.57
SMARCD3-210ENST00000477169 LOC389332A0A1B0GUA5 103 aa11.48□□□□□ -0.57
SMARCD3-210ENST00000477169 A0A1B0GUV1 79 aa11.48□□□□□ -0.57
SMARCD3-210ENST00000477169 PSCAO43653 123 aa11.48□□□□□ -0.57
SMARCD3-210ENST00000477169 FABP9Q0Z7S8 132 aa11.48□□□□□ -0.57
SMARCD3-210ENST00000477169 IGLV4-60A0A075B6I1 120 aa11.47□□□□□ -0.57
SMARCD3-210ENST00000477169 H7C423 109 aa11.47□□□□□ -0.57
SMARCD3-210ENST00000477169 ANGP03950 147 aaKnown RBP11.47□□□□□ -0.57
SMARCD3-210ENST00000477169 ALKBH7Q9BT30 221 aaPredicted RBP11.47□□□□□ -0.57
SMARCD3-210ENST00000477169 Q9HAA7 133 aa11.47□□□□□ -0.57
SMARCD3-210ENST00000477169 TRAPPC1Q9Y5R8 145 aa11.47□□□□□ -0.57
SMARCD3-210ENST00000477169 LRCOL1A6NCL2 159 aa11.46□□□□□ -0.57
SMARCD3-210ENST00000477169 TCAPO15273 167 aa11.46□□□□□ -0.57
SMARCD3-210ENST00000477169 XGP55808 180 aa11.46□□□□□ -0.57
SMARCD3-210ENST00000477169 C20orf203Q8NBC4 194 aa11.46□□□□□ -0.57
SMARCD3-210ENST00000477169 TRAV8-3A0A0A6YYJ7 113 aa11.45□□□□□ -0.58
SMARCD3-210ENST00000477169 FGF6P10767 208 aa11.45□□□□□ -0.58
SMARCD3-210ENST00000477169 KRTAP10-1P60331 282 aa11.45□□□□□ -0.58
SMARCD3-210ENST00000477169 ENHOQ6UWT2 76 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms