RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 F5H697 171 aa7.57□□□□□ -1.2
VARS2-208ENST00000477052 HLA-DQA1P01909 254 aa7.57□□□□□ -1.2
VARS2-208ENST00000477052 SRP19P09132 144 aaKnown RBP7.57□□□□□ -1.2
VARS2-208ENST00000477052 CXCL1P09341 107 aa7.57□□□□□ -1.2
VARS2-208ENST00000477052 ELOBQ15370 118 aa7.57□□□□□ -1.2
VARS2-208ENST00000477052 NTM-AS1Q6ZSK4 140 aa7.57□□□□□ -1.2
VARS2-208ENST00000477052 C1orf43Q9BWL3 253 aa7.57□□□□□ -1.2
VARS2-208ENST00000477052 C19orf71A6NCJ1 209 aa7.56□□□□□ -1.2
VARS2-208ENST00000477052 CRPP02741 224 aa7.56□□□□□ -1.2
VARS2-208ENST00000477052 GZMBP10144 247 aa7.56□□□□□ -1.2
VARS2-208ENST00000477052 GAGE6Q13070 117 aa7.56□□□□□ -1.2
VARS2-208ENST00000477052 SPANXN1Q5VSR9 72 aa7.56□□□□□ -1.2
VARS2-208ENST00000477052 OR10G8Q8NGN5 311 aa7.56□□□□□ -1.2
VARS2-208ENST00000477052 CHCHD7Q9BUK0 85 aa7.56□□□□□ -1.2
VARS2-208ENST00000477052 PPP1R2P9O14990 202 aa7.55□□□□□ -1.2
VARS2-208ENST00000477052 PRSS1P07477 247 aa7.55□□□□□ -1.2
VARS2-208ENST00000477052 CEBPGP53567 150 aa7.55□□□□□ -1.2
VARS2-208ENST00000477052 PKIAP61925 76 aa7.55□□□□□ -1.2
VARS2-208ENST00000477052 SRSF3P84103 164 aaKnown RBP7.55□□□□□ -1.2
VARS2-208ENST00000477052 Q0VG73 95 aa7.55□□□□□ -1.2
VARS2-208ENST00000477052 DAZAP1Q96EP5 407 aaKnown RBP7.55□□□□□ -1.2
VARS2-208ENST00000477052 SMIM7Q9BQ49 75 aa7.55□□□□□ -1.2
VARS2-208ENST00000477052 TPPP3Q9BW30 176 aa7.55□□□□□ -1.2
VARS2-208ENST00000477052 FAT3Q8TDW7 4589 aa7.55□□□□□ -1.2
VARS2-208ENST00000477052 PANO1I0J062 215 aa7.54□□□□□ -1.2
VARS2-208ENST00000477052 K7EN84 100 aa7.54□□□□□ -1.2
VARS2-208ENST00000477052 SNAI2O43623 268 aa7.54□□□□□ -1.2
VARS2-208ENST00000477052 RPS10P46783 165 aaKnown RBP7.54□□□□□ -1.2
VARS2-208ENST00000477052 HNRNPA3P51991 378 aaKnown RBP7.54□□□□□ -1.2
VARS2-208ENST00000477052 LINC00269Q8N2A0 174 aa7.54□□□□□ -1.2
VARS2-208ENST00000477052 OCC1Q8TAD7 63 aa7.54□□□□□ -1.2
VARS2-208ENST00000477052 KIF25-AS1Q9Y6Z4 181 aa7.54□□□□□ -1.2
VARS2-208ENST00000477052 IGLV10-54A0A075B6I4 117 aa7.53□□□□□ -1.2
VARS2-208ENST00000477052 ZNF727A8MUV8 499 aa7.53□□□□□ -1.2
VARS2-208ENST00000477052 C9JQL5 133 aa7.53□□□□□ -1.2
VARS2-208ENST00000477052 P01737 135 aa7.53□□□□□ -1.2
VARS2-208ENST00000477052 MGPP08493 103 aa7.53□□□□□ -1.2
VARS2-208ENST00000477052 RPS20P60866 119 aaKnown RBP7.53□□□□□ -1.2
VARS2-208ENST00000477052 RBX1P62877 108 aa7.53□□□□□ -1.2
VARS2-208ENST00000477052 PNRC1Q12796 327 aaPredicted RBP7.53□□□□□ -1.2
VARS2-208ENST00000477052 KRTAP26-1Q6PEX3 210 aa7.53□□□□□ -1.2
VARS2-208ENST00000477052 SSBP4Q9BWG4 385 aaPredicted RBP7.53□□□□□ -1.2
VARS2-208ENST00000477052 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.53□□□□□ -1.2
VARS2-208ENST00000477052 OR5AL1P0C617 328 aa7.52□□□□□ -1.21
VARS2-208ENST00000477052 RAB4AP20338 218 aa7.52□□□□□ -1.21
VARS2-208ENST00000477052 NDUFA6P56556 154 aa7.52□□□□□ -1.21
VARS2-208ENST00000477052 C14orf177Q52M58 125 aa7.52□□□□□ -1.21
VARS2-208ENST00000477052 FAM231DQ6ZW35 169 aa7.52□□□□□ -1.21
VARS2-208ENST00000477052 LINC01551Q86U37 167 aa7.52□□□□□ -1.21
VARS2-208ENST00000477052 NUDT10Q8NFP7 164 aa7.52□□□□□ -1.21
VARS2-208ENST00000477052 OR2D3Q8NGH3 330 aa7.52□□□□□ -1.21
VARS2-208ENST00000477052 NUDT11Q96G61 164 aa7.52□□□□□ -1.21
VARS2-208ENST00000477052 BTF3L4Q96K17 158 aa7.52□□□□□ -1.21
VARS2-208ENST00000477052 TMEM242Q9NWH2 141 aa7.52□□□□□ -1.21
VARS2-208ENST00000477052 HMCN2Q8NDA2 5059 aa7.52□□□□□ -1.21
VARS2-208ENST00000477052 XKRY2A2RUG3 117 aa7.51□□□□□ -1.21
VARS2-208ENST00000477052 SMIM17P0DL12 118 aa7.51□□□□□ -1.21
VARS2-208ENST00000477052 RPL37AP61513 92 aaKnown RBP7.51□□□□□ -1.21
VARS2-208ENST00000477052 GFRA4Q9GZZ7 299 aa7.51□□□□□ -1.21
VARS2-208ENST00000477052 RNASE7Q9H1E1 156 aaKnown RBP7.51□□□□□ -1.21
VARS2-208ENST00000477052 IGLC6P0CF74 106 aa7.5□□□□□ -1.21
VARS2-208ENST00000477052 MIAQ16674 131 aa7.5□□□□□ -1.21
VARS2-208ENST00000477052 TMEM241Q24JQ0 296 aa7.5□□□□□ -1.21
VARS2-208ENST00000477052 SUMO4Q6EEV6 95 aa7.5□□□□□ -1.21
VARS2-208ENST00000477052 AP1S3Q96PC3 154 aa7.5□□□□□ -1.21
VARS2-208ENST00000477052 CTDSP1Q9GZU7 261 aa7.5□□□□□ -1.21
VARS2-208ENST00000477052 RPP21Q9H633 154 aaKnown RBP7.5□□□□□ -1.21
VARS2-208ENST00000477052 PRR34Q9NV39 138 aa7.5□□□□□ -1.21
VARS2-208ENST00000477052 PKHD1L1Q86WI1 4243 aa7.5□□□□□ -1.21
VARS2-208ENST00000477052 IGLV4-60A0A075B6I1 120 aa7.49□□□□□ -1.21
VARS2-208ENST00000477052 TRBV25-1A0A075B6N4 114 aa7.49□□□□□ -1.21
VARS2-208ENST00000477052 M0QY20 66 aa7.49□□□□□ -1.21
VARS2-208ENST00000477052 FER1L6-AS1Q8NA97 138 aa7.49□□□□□ -1.21
VARS2-208ENST00000477052 NAT8Q9UHE5 227 aa7.49□□□□□ -1.21
VARS2-208ENST00000477052 IGHV1-24A0A0C4DH33 117 aa7.48□□□□□ -1.21
VARS2-208ENST00000477052 F2Z2F3 143 aa7.48□□□□□ -1.21
VARS2-208ENST00000477052 DDTP30046 118 aa7.48□□□□□ -1.21
VARS2-208ENST00000477052 RPL23P62829 140 aaKnown RBP7.48□□□□□ -1.21
VARS2-208ENST00000477052 REG3AQ06141 175 aa7.48□□□□□ -1.21
VARS2-208ENST00000477052 CT83Q5H943 113 aa7.48□□□□□ -1.21
VARS2-208ENST00000477052 SDIM1Q6ZPB5 146 aa7.48□□□□□ -1.21
VARS2-208ENST00000477052 C9orf163Q8N9P6 203 aa7.48□□□□□ -1.21
VARS2-208ENST00000477052 C20orf203Q8NBC4 194 aa7.48□□□□□ -1.21
VARS2-208ENST00000477052 ISOC2Q96AB3 205 aa7.48□□□□□ -1.21
VARS2-208ENST00000477052 OSTCQ9NRP0 149 aa7.48□□□□□ -1.21
VARS2-208ENST00000477052 UBR4Q5T4S7 5183 aa7.48□□□□□ -1.21
VARS2-208ENST00000477052 hDV102S1A0JD36 115 aa7.47□□□□□ -1.21
VARS2-208ENST00000477052 OXTP01178 125 aa7.47□□□□□ -1.21
VARS2-208ENST00000477052 CHTF8P0CG12 524 aa7.47□□□□□ -1.21
VARS2-208ENST00000477052 CTRLP40313 264 aa7.47□□□□□ -1.21
VARS2-208ENST00000477052 CACNG7P62955 275 aa7.47□□□□□ -1.21
VARS2-208ENST00000477052 IQCJQ1A5X6 159 aa7.47□□□□□ -1.21
VARS2-208ENST00000477052 DGAT2L7PQ6IED9 249 aa7.47□□□□□ -1.21
VARS2-208ENST00000477052 OR10D4PQ8NGN7 298 aa7.47□□□□□ -1.21
VARS2-208ENST00000477052 C2orf88Q9BSF0 95 aa7.47□□□□□ -1.21
VARS2-208ENST00000477052 A8MWL6 223 aa7.46□□□□□ -1.22
VARS2-208ENST00000477052 SLPIP03973 132 aa7.46□□□□□ -1.22
VARS2-208ENST00000477052 ADIRFQ15847 76 aa7.46□□□□□ -1.22
VARS2-208ENST00000477052 TMEM97Q5BJF2 176 aa7.46□□□□□ -1.22
VARS2-208ENST00000477052 WDR73Q6P4I2 378 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms