RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 I3L3M4 83 aa12.09□□□□□ -0.47
SREBF1-211ENST00000476994 M0R2N4 97 aa12.09□□□□□ -0.47
SREBF1-211ENST00000476994 VCYO14598 125 aa12.09□□□□□ -0.47
SREBF1-211ENST00000476994 IQCJQ1A5X6 159 aa12.09□□□□□ -0.47
SREBF1-211ENST00000476994 URB1-AS1Q96HZ7 61 aa12.09□□□□□ -0.47
SREBF1-211ENST00000476994 KRTAP17-1Q9BYP8 105 aa12.09□□□□□ -0.47
SREBF1-211ENST00000476994 Q8N8P6 123 aa12.08□□□□□ -0.48
SREBF1-211ENST00000476994 DEFB104AQ8WTQ1 72 aa12.08□□□□□ -0.48
SREBF1-211ENST00000476994 LINC00588Q9Y4M8 146 aa12.08□□□□□ -0.48
SREBF1-211ENST00000476994 HERC2O95714 4834 aa12.08□□□□□ -0.48
SREBF1-211ENST00000476994 LOC389332A0A1B0GUA5 103 aa12.07□□□□□ -0.48
SREBF1-211ENST00000476994 LINC01546A6NGU7 62 aa12.07□□□□□ -0.48
SREBF1-211ENST00000476994 PMCHP20382 165 aa12.07□□□□□ -0.48
SREBF1-211ENST00000476994 IFI27P40305 119 aaPredicted RBP12.07□□□□□ -0.48
SREBF1-211ENST00000476994 TRBV6-8A0A0A6YYG3 113 aa12.06□□□□□ -0.48
SREBF1-211ENST00000476994 COTL1Q14019 142 aa12.06□□□□□ -0.48
SREBF1-211ENST00000476994 LELP1Q5T871 98 aa12.06□□□□□ -0.48
SREBF1-211ENST00000476994 CHCHD7Q9BUK0 85 aa12.06□□□□□ -0.48
SREBF1-211ENST00000476994 MRPS16Q9Y3D3 137 aaKnown RBP12.06□□□□□ -0.48
SREBF1-211ENST00000476994 HIST1H2BKO60814 126 aa12.05□□□□□ -0.48
SREBF1-211ENST00000476994 HIST1H2BJP06899 126 aa12.05□□□□□ -0.48
SREBF1-211ENST00000476994 ESDP10768 282 aa12.05□□□□□ -0.48
SREBF1-211ENST00000476994 HIST1H2BOP23527 126 aa12.05□□□□□ -0.48
SREBF1-211ENST00000476994 HIST1H2BBP33778 126 aa12.05□□□□□ -0.48
SREBF1-211ENST00000476994 HIST1H2BDP58876 126 aa12.05□□□□□ -0.48
SREBF1-211ENST00000476994 HIST1H2BCP62807 126 aa12.05□□□□□ -0.48
SREBF1-211ENST00000476994 HIST2H2BEQ16778 126 aa12.05□□□□□ -0.48
SREBF1-211ENST00000476994 TMEM97Q5BJF2 176 aa12.05□□□□□ -0.48
SREBF1-211ENST00000476994 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.05□□□□□ -0.48
SREBF1-211ENST00000476994 HIST1H2BHQ93079 126 aa12.05□□□□□ -0.48
SREBF1-211ENST00000476994 HIST1H2BNQ99877 126 aa12.05□□□□□ -0.48
SREBF1-211ENST00000476994 HIST1H2BMQ99879 126 aa12.05□□□□□ -0.48
SREBF1-211ENST00000476994 NXT2Q9NPJ8 142 aaKnown RBP12.05□□□□□ -0.48
SREBF1-211ENST00000476994 TCAPO15273 167 aa12.04□□□□□ -0.48
SREBF1-211ENST00000476994 LINC00310P59036 64 aa12.04□□□□□ -0.48
SREBF1-211ENST00000476994 Q0VG73 95 aa12.04□□□□□ -0.48
SREBF1-211ENST00000476994 UPK3BQ9BT76 320 aa12.04□□□□□ -0.48
SREBF1-211ENST00000476994 CCL18P55774 89 aa12.03□□□□□ -0.48
SREBF1-211ENST00000476994 KIR2DL4Q99706 377 aa12.03□□□□□ -0.48
SREBF1-211ENST00000476994 TRBV25-1A0A075B6N4 114 aa12.02□□□□□ -0.49
SREBF1-211ENST00000476994 IGHV1-24A0A0C4DH33 117 aa12.02□□□□□ -0.49
SREBF1-211ENST00000476994 A0A1B0GVY2 172 aa12.01□□□□□ -0.49
SREBF1-211ENST00000476994 K7EMI3 77 aa12.01□□□□□ -0.49
SREBF1-211ENST00000476994 RTL8CO15255 209 aa12.01□□□□□ -0.49
SREBF1-211ENST00000476994 AMTP48728 403 aa12.01□□□□□ -0.49
SREBF1-211ENST00000476994 NIT1Q86X76 327 aa12.01□□□□□ -0.49
SREBF1-211ENST00000476994 WFDC10BQ8IUB3 73 aa12.01□□□□□ -0.49
SREBF1-211ENST00000476994 PRSS3P2Q8NHM4 247 aa12.01□□□□□ -0.49
SREBF1-211ENST00000476994 C1orf196B1AJZ1 125 aa12□□□□□ -0.49
SREBF1-211ENST00000476994 TMEM243Q9BU79 118 aa12□□□□□ -0.49
SREBF1-211ENST00000476994 FCER1GP30273 86 aa11.99□□□□□ -0.49
SREBF1-211ENST00000476994 C1orf134Q5TEV5 83 aa11.99□□□□□ -0.49
SREBF1-211ENST00000476994 C20orf203Q8NBC4 194 aa11.99□□□□□ -0.49
SREBF1-211ENST00000476994 KIAA1109Q2LD37 5005 aa11.98□□□□□ -0.49
SREBF1-211ENST00000476994 A0A096LNJ9 63 aa11.98□□□□□ -0.49
SREBF1-211ENST00000476994 LINC00614P0C842 121 aa11.98□□□□□ -0.49
SREBF1-211ENST00000476994 LAGE3Q14657 143 aa11.98□□□□□ -0.49
SREBF1-211ENST00000476994 FA2HQ7L5A8 372 aa11.98□□□□□ -0.49
SREBF1-211ENST00000476994 Q8N3U1 123 aa11.98□□□□□ -0.49
SREBF1-211ENST00000476994 AP5S1Q9NUS5 200 aa11.98□□□□□ -0.49
SREBF1-211ENST00000476994 DNAH2Q9P225 4427 aa11.98□□□□□ -0.49
SREBF1-211ENST00000476994 FAT2Q9NYQ8 4349 aa11.97□□□□□ -0.49
SREBF1-211ENST00000476994 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.97□□□□□ -0.49
SREBF1-211ENST00000476994 TRAV8-6A0A0B4J262 113 aa11.97□□□□□ -0.49
SREBF1-211ENST00000476994 IGKV2-29A2NJV5 120 aaPredicted RBP11.97□□□□□ -0.49
SREBF1-211ENST00000476994 NUPR1O60356 82 aa11.97□□□□□ -0.49
SREBF1-211ENST00000476994 ORMDL2Q53FV1 153 aa11.97□□□□□ -0.49
SREBF1-211ENST00000476994 COA6Q5JTJ3 125 aaKnown RBP11.97□□□□□ -0.49
SREBF1-211ENST00000476994 Q6ZR54 194 aa11.97□□□□□ -0.49
SREBF1-211ENST00000476994 PKHD1P08F94 4074 aa11.96□□□□□ -0.49
SREBF1-211ENST00000476994 H7C423 109 aa11.96□□□□□ -0.49
SREBF1-211ENST00000476994 SERF1AO75920 110 aa11.96□□□□□ -0.49
SREBF1-211ENST00000476994 DNAH10OSP0CZ25 163 aa11.96□□□□□ -0.49
SREBF1-211ENST00000476994 RAB5BP61020 215 aa11.96□□□□□ -0.49
SREBF1-211ENST00000476994 RPL39P62891 51 aaKnown RBP11.96□□□□□ -0.49
SREBF1-211ENST00000476994 GAGE6Q13070 117 aa11.96□□□□□ -0.49
SREBF1-211ENST00000476994 RNASEKQ6P5S7 137 aaKnown RBP11.96□□□□□ -0.49
SREBF1-211ENST00000476994 BAGE3Q86Y29 109 aa11.96□□□□□ -0.49
SREBF1-211ENST00000476994 CHCHD1Q96BP2 118 aaKnown RBP11.96□□□□□ -0.49
SREBF1-211ENST00000476994 CHCHD5Q9BSY4 110 aa11.96□□□□□ -0.49
SREBF1-211ENST00000476994 DNAH17Q9UFH2 4485 aa11.95□□□□□ -0.5
SREBF1-211ENST00000476994 LINC01556Q5JQF7 62 aa11.95□□□□□ -0.5
SREBF1-211ENST00000476994 SIVA1O15304 175 aa11.94□□□□□ -0.5
SREBF1-211ENST00000476994 MPV17L2Q567V2 206 aa11.94□□□□□ -0.5
SREBF1-211ENST00000476994 MRPL52Q86TS9 123 aaKnown RBP11.94□□□□□ -0.5
SREBF1-211ENST00000476994 FAM104AQ969W3 186 aa11.94□□□□□ -0.5
SREBF1-211ENST00000476994 UBE2D4Q9Y2X8 147 aa11.94□□□□□ -0.5
SREBF1-211ENST00000476994 FGF6P10767 208 aa11.93□□□□□ -0.5
SREBF1-211ENST00000476994 C2orf66Q6UXQ4 117 aa11.93□□□□□ -0.5
SREBF1-211ENST00000476994 TIMM21Q9BVV7 248 aa11.93□□□□□ -0.5
SREBF1-211ENST00000476994 Q9H8V8 135 aa11.93□□□□□ -0.5
SREBF1-211ENST00000476994 A0A1B0GUV1 79 aa11.92□□□□□ -0.5
SREBF1-211ENST00000476994 RBX1P62877 108 aa11.92□□□□□ -0.5
SREBF1-211ENST00000476994 PMCHL1Q16048 86 aa11.92□□□□□ -0.5
SREBF1-211ENST00000476994 TOMM6Q96B49 74 aa11.92□□□□□ -0.5
SREBF1-211ENST00000476994 CYSLTR1Q9Y271 337 aa11.92□□□□□ -0.5
SREBF1-211ENST00000476994 IGLV4-60A0A075B6I1 120 aa11.91□□□□□ -0.5
SREBF1-211ENST00000476994 UBE2L6O14933 153 aa11.91□□□□□ -0.5
SREBF1-211ENST00000476994 PKIAP61925 76 aa11.91□□□□□ -0.5
SREBF1-211ENST00000476994 Q8N976 141 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms