RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 TMEM243Q9BU79 118 aa11.94□□□□□ -0.5
SMIM4-202ENST00000476842 TMEM70Q9BUB7 260 aa11.94□□□□□ -0.5
SMIM4-202ENST00000476842 TMEM242Q9NWH2 141 aa11.94□□□□□ -0.5
SMIM4-202ENST00000476842 KLK12Q9UKR0 248 aa11.94□□□□□ -0.5
SMIM4-202ENST00000476842 C7orf77A4D0Y5 90 aa11.93□□□□□ -0.5
SMIM4-202ENST00000476842 CKS2P33552 79 aa11.93□□□□□ -0.5
SMIM4-202ENST00000476842 AMTP48728 403 aa11.93□□□□□ -0.5
SMIM4-202ENST00000476842 GAGE6Q13070 117 aa11.93□□□□□ -0.5
SMIM4-202ENST00000476842 MPV17L2Q567V2 206 aa11.93□□□□□ -0.5
SMIM4-202ENST00000476842 CLRN3Q8NCR9 226 aa11.93□□□□□ -0.5
SMIM4-202ENST00000476842 Q9HAA7 133 aa11.93□□□□□ -0.5
SMIM4-202ENST00000476842 TRBV27A0A0K0K1C4 114 aa11.92□□□□□ -0.5
SMIM4-202ENST00000476842 TRBV24-1A0A075B6N3 115 aa11.91□□□□□ -0.5
SMIM4-202ENST00000476842 TRAV9-1A0A075B6T8 112 aa11.91□□□□□ -0.5
SMIM4-202ENST00000476842 VCYO14598 125 aa11.91□□□□□ -0.5
SMIM4-202ENST00000476842 PPBPP02775 128 aa11.91□□□□□ -0.5
SMIM4-202ENST00000476842 RBX1P62877 108 aa11.91□□□□□ -0.5
SMIM4-202ENST00000476842 RHEBQ15382 184 aa11.91□□□□□ -0.5
SMIM4-202ENST00000476842 Q8N976 141 aa11.91□□□□□ -0.5
SMIM4-202ENST00000476842 TM2D2Q9BX73 214 aa11.91□□□□□ -0.5
SMIM4-202ENST00000476842 BIRC6Q9NR09 4857 aa11.9□□□□□ -0.5
SMIM4-202ENST00000476842 A0A1B0GUV1 79 aa11.9□□□□□ -0.5
SMIM4-202ENST00000476842 SUMO2P61956 95 aaKnown RBP11.9□□□□□ -0.5
SMIM4-202ENST00000476842 UBE2WQ96B02 151 aa11.9□□□□□ -0.5
SMIM4-202ENST00000476842 C20orf78Q9BR46 151 aa11.9□□□□□ -0.5
SMIM4-202ENST00000476842 D6R8Y8 96 aa11.89□□□□□ -0.51
SMIM4-202ENST00000476842 UBE2L6O14933 153 aa11.89□□□□□ -0.51
SMIM4-202ENST00000476842 TSHBP01222 138 aa11.89□□□□□ -0.51
SMIM4-202ENST00000476842 APCSP02743 223 aa11.89□□□□□ -0.51
SMIM4-202ENST00000476842 ANGP03950 147 aaKnown RBP11.89□□□□□ -0.51
SMIM4-202ENST00000476842 Q0VG73 95 aa11.89□□□□□ -0.51
SMIM4-202ENST00000476842 RPS10P5Q9NQ39 176 aa11.89□□□□□ -0.51
SMIM4-202ENST00000476842 H7C423 109 aa11.88□□□□□ -0.51
SMIM4-202ENST00000476842 PSCAO43653 123 aa11.88□□□□□ -0.51
SMIM4-202ENST00000476842 TNFRSF6BO95407 300 aa11.88□□□□□ -0.51
SMIM4-202ENST00000476842 APOC3P02656 99 aa11.88□□□□□ -0.51
SMIM4-202ENST00000476842 S100PP25815 95 aa11.88□□□□□ -0.51
SMIM4-202ENST00000476842 RPL32P62910 135 aaKnown RBP11.88□□□□□ -0.51
SMIM4-202ENST00000476842 ENHOQ6UWT2 76 aa11.88□□□□□ -0.51
SMIM4-202ENST00000476842 TMEM136Q6ZRR5 245 aa11.88□□□□□ -0.51
SMIM4-202ENST00000476842 RMI2Q96E14 147 aa11.88□□□□□ -0.51
SMIM4-202ENST00000476842 COX11Q9Y6N1 276 aa11.88□□□□□ -0.51
SMIM4-202ENST00000476842 PHOX2AO14813 284 aa11.87□□□□□ -0.51
SMIM4-202ENST00000476842 ESDP10768 282 aa11.87□□□□□ -0.51
SMIM4-202ENST00000476842 NDUFA5Q16718 116 aa11.87□□□□□ -0.51
SMIM4-202ENST00000476842 ORMDL3Q8N138 153 aa11.87□□□□□ -0.51
SMIM4-202ENST00000476842 PRR34Q9NV39 138 aa11.87□□□□□ -0.51
SMIM4-202ENST00000476842 DYNC1H1Q14204 4646 aaKnown RBP11.87□□□□□ -0.51
SMIM4-202ENST00000476842 A0A087WTM6 91 aa11.86□□□□□ -0.51
SMIM4-202ENST00000476842 EREGO14944 169 aa11.86□□□□□ -0.51
SMIM4-202ENST00000476842 SVBPQ8N300 66 aa11.86□□□□□ -0.51
SMIM4-202ENST00000476842 C20orf203Q8NBC4 194 aa11.86□□□□□ -0.51
SMIM4-202ENST00000476842 IGLV4-60A0A075B6I1 120 aa11.85□□□□□ -0.51
SMIM4-202ENST00000476842 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.85□□□□□ -0.51
SMIM4-202ENST00000476842 IGKV2-29A2NJV5 120 aaPredicted RBP11.85□□□□□ -0.51
SMIM4-202ENST00000476842 LRCOL1A6NCL2 159 aa11.85□□□□□ -0.51
SMIM4-202ENST00000476842 SNAPINO95295 136 aa11.85□□□□□ -0.51
SMIM4-202ENST00000476842 CRPP02741 224 aa11.85□□□□□ -0.51
SMIM4-202ENST00000476842 LINC00269Q8N2A0 174 aa11.85□□□□□ -0.51
SMIM4-202ENST00000476842 PRELID3AQ96N28 172 aa11.85□□□□□ -0.51
SMIM4-202ENST00000476842 KIR2DL4Q99706 377 aa11.85□□□□□ -0.51
SMIM4-202ENST00000476842 IGKV2D-24A0A075B6R9 120 aa11.84□□□□□ -0.51
SMIM4-202ENST00000476842 NPYP01303 97 aa11.84□□□□□ -0.51
SMIM4-202ENST00000476842 FCER1GP30273 86 aa11.84□□□□□ -0.51
SMIM4-202ENST00000476842 MIAQ16674 131 aa11.84□□□□□ -0.51
SMIM4-202ENST00000476842 PKHD1P08F94 4074 aa11.83□□□□□ -0.52
SMIM4-202ENST00000476842 SPATA12Q7Z6I5 190 aa11.83□□□□□ -0.52
SMIM4-202ENST00000476842 LAMTOR2Q9Y2Q5 125 aa11.83□□□□□ -0.52
SMIM4-202ENST00000476842 PRSS47A8MTI9 375 aa11.82□□□□□ -0.52
SMIM4-202ENST00000476842 TCAPO15273 167 aa11.82□□□□□ -0.52
SMIM4-202ENST00000476842 FGF6P10767 208 aa11.82□□□□□ -0.52
SMIM4-202ENST00000476842 REG3AQ06141 175 aa11.82□□□□□ -0.52
SMIM4-202ENST00000476842 AMMECR1LQ6DCA0 310 aa11.82□□□□□ -0.52
SMIM4-202ENST00000476842 SLC7A5P1Q8MH63 180 aa11.82□□□□□ -0.52
SMIM4-202ENST00000476842 MAPKAPK5-AS1Q8N8E1 139 aa11.82□□□□□ -0.52
SMIM4-202ENST00000476842 SMIM2Q9BVW6 85 aa11.82□□□□□ -0.52
SMIM4-202ENST00000476842 GNB1LQ9BYB4 327 aa11.82□□□□□ -0.52
SMIM4-202ENST00000476842 PGPEP1Q9NXJ5 209 aa11.82□□□□□ -0.52
SMIM4-202ENST00000476842 ZNF25P17030 456 aaPredicted RBP11.81□□□□□ -0.52
SMIM4-202ENST00000476842 KRTAP10-2P60368 255 aa11.81□□□□□ -0.52
SMIM4-202ENST00000476842 COX19Q49B96 90 aa11.81□□□□□ -0.52
SMIM4-202ENST00000476842 RNASEKQ6P5S7 137 aaKnown RBP11.81□□□□□ -0.52
SMIM4-202ENST00000476842 C1orf43Q9BWL3 253 aa11.81□□□□□ -0.52
SMIM4-202ENST00000476842 CLPSL2Q6UWE3 100 aa11.8□□□□□ -0.52
SMIM4-202ENST00000476842 MRPL52Q86TS9 123 aaKnown RBP11.8□□□□□ -0.52
SMIM4-202ENST00000476842 TRAV8-4A0A0B4J246 113 aa11.79□□□□□ -0.52
SMIM4-202ENST00000476842 HLA-DQA1P01909 254 aa11.79□□□□□ -0.52
SMIM4-202ENST00000476842 TMEM101Q96IK0 257 aa11.79□□□□□ -0.52
SMIM4-202ENST00000476842 KRTAP26-1Q6PEX3 210 aa11.78□□□□□ -0.52
SMIM4-202ENST00000476842 BAALCQ8WXS3 180 aa11.78□□□□□ -0.52
SMIM4-202ENST00000476842 MAP1LC3AQ9H492 121 aa11.78□□□□□ -0.52
SMIM4-202ENST00000476842 DNAH5Q8TE73 4624 aa11.78□□□□□ -0.52
SMIM4-202ENST00000476842 SMAGPQ0VAQ4 97 aa11.77□□□□□ -0.53
SMIM4-202ENST00000476842 TMEM18Q96B42 140 aa11.77□□□□□ -0.53
SMIM4-202ENST00000476842 LOC389332A0A1B0GUA5 103 aa11.76□□□□□ -0.53
SMIM4-202ENST00000476842 C16orf90A8MZG2 172 aa11.76□□□□□ -0.53
SMIM4-202ENST00000476842 MT-ND6P03923 174 aa11.76□□□□□ -0.53
SMIM4-202ENST00000476842 WFDC2Q14508 124 aa11.76□□□□□ -0.53
SMIM4-202ENST00000476842 KIAA1644Q3SXP7 199 aa11.76□□□□□ -0.53
SMIM4-202ENST00000476842 Q8N814 137 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms