RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 ELOBQ15370 118 aa9□□□□□ -0.97
HLA-DPA1-246ENST00000476642 MRPL51Q4U2R6 128 aaKnown RBP9□□□□□ -0.97
HLA-DPA1-246ENST00000476642 C1orf134Q5TEV5 83 aa9□□□□□ -0.97
HLA-DPA1-246ENST00000476642 RPL39LQ96EH5 51 aaKnown RBP9□□□□□ -0.97
HLA-DPA1-246ENST00000476642 KMT2AQ03164 3969 aa9□□□□□ -0.97
HLA-DPA1-246ENST00000476642 I3L3M4 83 aa8.99□□□□□ -0.97
HLA-DPA1-246ENST00000476642 PHOX2AO14813 284 aa8.99□□□□□ -0.97
HLA-DPA1-246ENST00000476642 PMCHP20382 165 aa8.99□□□□□ -0.97
HLA-DPA1-246ENST00000476642 RPS10P46783 165 aaKnown RBP8.99□□□□□ -0.97
HLA-DPA1-246ENST00000476642 IQCJQ1A5X6 159 aa8.99□□□□□ -0.97
HLA-DPA1-246ENST00000476642 LINC00336Q6ZUF6 198 aa8.99□□□□□ -0.97
HLA-DPA1-246ENST00000476642 NFE4Q86UQ8 179 aa8.99□□□□□ -0.97
HLA-DPA1-246ENST00000476642 ORMDL3Q8N138 153 aa8.99□□□□□ -0.97
HLA-DPA1-246ENST00000476642 C6orf223Q8N319 242 aa8.99□□□□□ -0.97
HLA-DPA1-246ENST00000476642 YPEL4Q96NS1 127 aa8.99□□□□□ -0.97
HLA-DPA1-246ENST00000476642 FRAS1Q86XX4 4008 aa8.99□□□□□ -0.97
HLA-DPA1-246ENST00000476642 TSTD3H0UI37 97 aa8.98□□□□□ -0.97
HLA-DPA1-246ENST00000476642 VCYO14598 125 aa8.98□□□□□ -0.97
HLA-DPA1-246ENST00000476642 TCAPO15273 167 aa8.98□□□□□ -0.97
HLA-DPA1-246ENST00000476642 SUMO2P61956 95 aaKnown RBP8.98□□□□□ -0.97
HLA-DPA1-246ENST00000476642 NIT1Q86X76 327 aa8.98□□□□□ -0.97
HLA-DPA1-246ENST00000476642 C20orf78Q9BR46 151 aa8.98□□□□□ -0.97
HLA-DPA1-246ENST00000476642 CHCHD5Q9BSY4 110 aa8.98□□□□□ -0.97
HLA-DPA1-246ENST00000476642 LAMTOR2Q9Y2Q5 125 aa8.98□□□□□ -0.97
HLA-DPA1-246ENST00000476642 TRBV24-1A0A075B6N3 115 aa8.97□□□□□ -0.97
HLA-DPA1-246ENST00000476642 TMEM262E9PQX1 116 aa8.97□□□□□ -0.97
HLA-DPA1-246ENST00000476642 UBE2L6O14933 153 aa8.97□□□□□ -0.97
HLA-DPA1-246ENST00000476642 HLA-DQA1P01909 254 aa8.97□□□□□ -0.97
HLA-DPA1-246ENST00000476642 AMTP48728 403 aa8.97□□□□□ -0.97
HLA-DPA1-246ENST00000476642 LAGE3Q14657 143 aa8.97□□□□□ -0.97
HLA-DPA1-246ENST00000476642 KIR2DL4Q99706 377 aa8.97□□□□□ -0.97
HLA-DPA1-246ENST00000476642 TMEM243Q9BU79 118 aa8.97□□□□□ -0.97
HLA-DPA1-246ENST00000476642 TMEM70Q9BUB7 260 aa8.97□□□□□ -0.97
HLA-DPA1-246ENST00000476642 TRBV27A0A0K0K1C4 114 aa8.96□□□□□ -0.98
HLA-DPA1-246ENST00000476642 D6R8Y8 96 aa8.96□□□□□ -0.98
HLA-DPA1-246ENST00000476642 IGHV3-30P01768 117 aa8.96□□□□□ -0.98
HLA-DPA1-246ENST00000476642 IGHV3-33P01772 117 aa8.96□□□□□ -0.98
HLA-DPA1-246ENST00000476642 APCSP02743 223 aa8.96□□□□□ -0.98
HLA-DPA1-246ENST00000476642 MT-ND6P03923 174 aa8.96□□□□□ -0.98
HLA-DPA1-246ENST00000476642 IGHV3-30-3P0DP02 117 aa8.96□□□□□ -0.98
HLA-DPA1-246ENST00000476642 IGHV3-30-5P0DP03 117 aa8.96□□□□□ -0.98
HLA-DPA1-246ENST00000476642 POLR2KP53803 58 aaKnown RBP8.96□□□□□ -0.98
HLA-DPA1-246ENST00000476642 RPL32P62910 135 aaKnown RBP8.96□□□□□ -0.98
HLA-DPA1-246ENST00000476642 TMEM136Q6ZRR5 245 aa8.96□□□□□ -0.98
HLA-DPA1-246ENST00000476642 NTM-AS1Q6ZSK4 140 aa8.96□□□□□ -0.98
HLA-DPA1-246ENST00000476642 NRACQ8N912 160 aa8.96□□□□□ -0.98
HLA-DPA1-246ENST00000476642 TRAV8-3A0A0A6YYJ7 113 aa8.95□□□□□ -0.98
HLA-DPA1-246ENST00000476642 IBA57-AS1B1ANH7 110 aa8.95□□□□□ -0.98
HLA-DPA1-246ENST00000476642 SMKR1H3BMG3 65 aa8.95□□□□□ -0.98
HLA-DPA1-246ENST00000476642 H7C423 109 aa8.95□□□□□ -0.98
HLA-DPA1-246ENST00000476642 TNFRSF6BO95407 300 aa8.95□□□□□ -0.98
HLA-DPA1-246ENST00000476642 NDUFA6P56556 154 aa8.95□□□□□ -0.98
HLA-DPA1-246ENST00000476642 SMAGPQ0VAQ4 97 aa8.95□□□□□ -0.98
HLA-DPA1-246ENST00000476642 GNB1LQ9BYB4 327 aa8.95□□□□□ -0.98
HLA-DPA1-246ENST00000476642 DNAH10Q8IVF4 4471 aa8.95□□□□□ -0.98
HLA-DPA1-246ENST00000476642 HERC2O95714 4834 aa8.94□□□□□ -0.98
HLA-DPA1-246ENST00000476642 FCER1GP30273 86 aa8.94□□□□□ -0.98
HLA-DPA1-246ENST00000476642 PRELID3AQ96N28 172 aa8.94□□□□□ -0.98
HLA-DPA1-246ENST00000476642 GAS8-AS1O95177 125 aa8.93□□□□□ -0.98
HLA-DPA1-246ENST00000476642 Q0VG73 95 aa8.93□□□□□ -0.98
HLA-DPA1-246ENST00000476642 PYY3Q5JQD4 70 aa8.93□□□□□ -0.98
HLA-DPA1-246ENST00000476642 RMI2Q96E14 147 aa8.93□□□□□ -0.98
HLA-DPA1-246ENST00000476642 KRTAP1-5Q9BYS1 174 aa8.93□□□□□ -0.98
HLA-DPA1-246ENST00000476642 COX11Q9Y6N1 276 aa8.93□□□□□ -0.98
HLA-DPA1-246ENST00000476642 DNAH6Q9C0G6 4158 aa8.93□□□□□ -0.98
HLA-DPA1-246ENST00000476642 A0A1B0GUV1 79 aa8.92□□□□□ -0.98
HLA-DPA1-246ENST00000476642 PRSS29PA6NIE9 313 aa8.92□□□□□ -0.98
HLA-DPA1-246ENST00000476642 CRPP02741 224 aa8.92□□□□□ -0.98
HLA-DPA1-246ENST00000476642 GAGE6Q13070 117 aa8.92□□□□□ -0.98
HLA-DPA1-246ENST00000476642 HIST3H2BBQ8N257 126 aa8.92□□□□□ -0.98
HLA-DPA1-246ENST00000476642 TMEM18Q96B42 140 aa8.92□□□□□ -0.98
HLA-DPA1-246ENST00000476642 SMIM2Q9BVW6 85 aa8.92□□□□□ -0.98
HLA-DPA1-246ENST00000476642 TM2D2Q9BX73 214 aa8.92□□□□□ -0.98
HLA-DPA1-246ENST00000476642 MAP1LC3AQ9H492 121 aa8.92□□□□□ -0.98
HLA-DPA1-246ENST00000476642 PRSS47A8MTI9 375 aa8.91□□□□□ -0.98
HLA-DPA1-246ENST00000476642 HIST1H2BKO60814 126 aa8.91□□□□□ -0.98
HLA-DPA1-246ENST00000476642 TSHBP01222 138 aa8.91□□□□□ -0.98
HLA-DPA1-246ENST00000476642 NPYP01303 97 aa8.91□□□□□ -0.98
HLA-DPA1-246ENST00000476642 ANGP03950 147 aaKnown RBP8.91□□□□□ -0.98
HLA-DPA1-246ENST00000476642 HIST1H2BJP06899 126 aa8.91□□□□□ -0.98
HLA-DPA1-246ENST00000476642 ZNF25P17030 456 aaPredicted RBP8.91□□□□□ -0.98
HLA-DPA1-246ENST00000476642 HIST1H2BOP23527 126 aa8.91□□□□□ -0.98
HLA-DPA1-246ENST00000476642 DDTP30046 118 aa8.91□□□□□ -0.98
HLA-DPA1-246ENST00000476642 HIST1H2BBP33778 126 aa8.91□□□□□ -0.98
HLA-DPA1-246ENST00000476642 HIST1H2BDP58876 126 aa8.91□□□□□ -0.98
HLA-DPA1-246ENST00000476642 HIST1H2BCP62807 126 aa8.91□□□□□ -0.98
HLA-DPA1-246ENST00000476642 HIST2H2BEQ16778 126 aa8.91□□□□□ -0.98
HLA-DPA1-246ENST00000476642 MPV17L2Q567V2 206 aa8.91□□□□□ -0.98
HLA-DPA1-246ENST00000476642 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.91□□□□□ -0.98
HLA-DPA1-246ENST00000476642 AMMECR1LQ6DCA0 310 aa8.91□□□□□ -0.98
HLA-DPA1-246ENST00000476642 OR10D4PQ8NGN7 298 aa8.91□□□□□ -0.98
HLA-DPA1-246ENST00000476642 HIST1H2BHQ93079 126 aa8.91□□□□□ -0.98
HLA-DPA1-246ENST00000476642 HIST1H2BNQ99877 126 aa8.91□□□□□ -0.98
HLA-DPA1-246ENST00000476642 HIST1H2BMQ99879 126 aa8.91□□□□□ -0.98
HLA-DPA1-246ENST00000476642 KLK12Q9UKR0 248 aa8.91□□□□□ -0.98
HLA-DPA1-246ENST00000476642 K7EMI3 77 aa8.9□□□□□ -0.98
HLA-DPA1-246ENST00000476642 RTL8CO15255 209 aa8.9□□□□□ -0.98
HLA-DPA1-246ENST00000476642 RBX1P62877 108 aa8.9□□□□□ -0.98
HLA-DPA1-246ENST00000476642 TMEM101Q96IK0 257 aa8.9□□□□□ -0.98
HLA-DPA1-246ENST00000476642 C2orf88Q9BSF0 95 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms