RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 AZU1P20160 251 aa12.11□□□□□ -0.47
TVP23B-202ENST00000476139 M0R2P5 195 aa12.1□□□□□ -0.47
TVP23B-202ENST00000476139 SH2D6Q7Z4S9 175 aa12.1□□□□□ -0.47
TVP23B-202ENST00000476139 C11orf72Q8NBR9 251 aa12.1□□□□□ -0.47
TVP23B-202ENST00000476139 I3L3M4 83 aa12.09□□□□□ -0.47
TVP23B-202ENST00000476139 MRPL16Q9NX20 251 aaKnown RBP12.09□□□□□ -0.47
TVP23B-202ENST00000476139 PGPEP1Q9NXJ5 209 aa12.09□□□□□ -0.47
TVP23B-202ENST00000476139 RRN3P1Q2M238 152 aa12.09□□□□□ -0.47
TVP23B-202ENST00000476139 TIMM17AQ99595 171 aa12.09□□□□□ -0.47
TVP23B-202ENST00000476139 LINC01549A6NIU2 74 aa12.09□□□□□ -0.47
TVP23B-202ENST00000476139 TMEM141Q96I45 108 aa12.09□□□□□ -0.47
TVP23B-202ENST00000476139 RNASE1P07998 156 aaKnown RBP12.08□□□□□ -0.48
TVP23B-202ENST00000476139 STHQ8IWL8 128 aa12.08□□□□□ -0.48
TVP23B-202ENST00000476139 TSSC4Q9Y5U2 329 aaPredicted RBP12.08□□□□□ -0.48
TVP23B-202ENST00000476139 NSUN5P1Q3KNT7 163 aa12.08□□□□□ -0.48
TVP23B-202ENST00000476139 RNASE13Q5GAN3 156 aaKnown RBP12.08□□□□□ -0.48
TVP23B-202ENST00000476139 CFAP126Q5VTH2 177 aa12.08□□□□□ -0.48
TVP23B-202ENST00000476139 CEMP1Q6PRD7 247 aaPredicted RBP12.08□□□□□ -0.48
TVP23B-202ENST00000476139 C20orf203Q8NBC4 194 aa12.08□□□□□ -0.48
TVP23B-202ENST00000476139 HIVEP2P31629 2446 aa12.07□□□□□ -0.48
TVP23B-202ENST00000476139 INSP01308 110 aa12.07□□□□□ -0.48
TVP23B-202ENST00000476139 ZNF415Q09FC8 603 aa12.07□□□□□ -0.48
TVP23B-202ENST00000476139 ETDBQ3ZM63 59 aa12.07□□□□□ -0.48
TVP23B-202ENST00000476139 HERVK_113P61574 105 aa12.06□□□□□ -0.48
TVP23B-202ENST00000476139 LOC107984156A0A0G2JMH3 177 aa12.06□□□□□ -0.48
TVP23B-202ENST00000476139 A8MWV9 139 aa12.06□□□□□ -0.48
TVP23B-202ENST00000476139 ARL17AQ8IVW1 177 aa12.06□□□□□ -0.48
TVP23B-202ENST00000476139 C1orf158Q8N1D5 194 aa12.06□□□□□ -0.48
TVP23B-202ENST00000476139 WFDC10AQ9H1F0 79 aa12.06□□□□□ -0.48
TVP23B-202ENST00000476139 A0A0J9YY99 117 aa12.05□□□□□ -0.48
TVP23B-202ENST00000476139 RHOHQ15669 191 aa12.05□□□□□ -0.48
TVP23B-202ENST00000476139 TRAV25A0A0B4J276 109 aa12.05□□□□□ -0.48
TVP23B-202ENST00000476139 A0A0J9YXV3 536 aa12.05□□□□□ -0.48
TVP23B-202ENST00000476139 TNFRSF18Q9Y5U5 241 aa12.05□□□□□ -0.48
TVP23B-202ENST00000476139 OTOGQ6ZRI0 2925 aa12.05□□□□□ -0.48
TVP23B-202ENST00000476139 C16orf95Q9H693 158 aa12.04□□□□□ -0.48
TVP23B-202ENST00000476139 IGHV3-38A0A0C4DH36 116 aa12.03□□□□□ -0.48
TVP23B-202ENST00000476139 COTL1Q14019 142 aa12.03□□□□□ -0.48
TVP23B-202ENST00000476139 A0A1B0GWB2 263 aa12.03□□□□□ -0.48
TVP23B-202ENST00000476139 ADARB2-AS1A8MUL3 147 aa12.03□□□□□ -0.48
TVP23B-202ENST00000476139 J3QQQ9 107 aa12.03□□□□□ -0.48
TVP23B-202ENST00000476139 GAGE13Q4V321 117 aa12.03□□□□□ -0.48
TVP23B-202ENST00000476139 PAPPA-AS1Q5QFB9 102 aa12.02□□□□□ -0.49
TVP23B-202ENST00000476139 FAM104AQ969W3 186 aa12.02□□□□□ -0.49
TVP23B-202ENST00000476139 IGLV4-3A0A075B6K6 122 aa12.02□□□□□ -0.49
TVP23B-202ENST00000476139 LGALS3P17931 250 aaKnown RBP12.02□□□□□ -0.49
TVP23B-202ENST00000476139 INSL3P51460 131 aa12.02□□□□□ -0.49
TVP23B-202ENST00000476139 EDA2RQ9HAV5 297 aa12.02□□□□□ -0.49
TVP23B-202ENST00000476139 PSMB2P49721 201 aa12.01□□□□□ -0.49
TVP23B-202ENST00000476139 HILS1P60008 231 aa12.01□□□□□ -0.49
TVP23B-202ENST00000476139 VCX2Q9H322 139 aa12.01□□□□□ -0.49
TVP23B-202ENST00000476139 TSPAN13O95857 204 aa12.01□□□□□ -0.49
TVP23B-202ENST00000476139 ZNF418Q8TF45 676 aaPredicted RBP12.01□□□□□ -0.49
TVP23B-202ENST00000476139 LINC00467Q9BRT7 94 aa12.01□□□□□ -0.49
TVP23B-202ENST00000476139 SPXQ9BT56 116 aa12.01□□□□□ -0.49
TVP23B-202ENST00000476139 SPANXB1Q9NS25 103 aaPredicted RBP12.01□□□□□ -0.49
TVP23B-202ENST00000476139 BEAN1Q3B7T3 259 aa12□□□□□ -0.49
TVP23B-202ENST00000476139 F8W1H4 67 aa12□□□□□ -0.49
TVP23B-202ENST00000476139 PIK3CD-AS1Q5SR53 167 aa12□□□□□ -0.49
TVP23B-202ENST00000476139 CLUHP3Q96NS8 147 aa12□□□□□ -0.49
TVP23B-202ENST00000476139 TRGV1A0A0A0MS02 117 aa12□□□□□ -0.49
TVP23B-202ENST00000476139 UBE2D1P51668 147 aa12□□□□□ -0.49
TVP23B-202ENST00000476139 VWFP04275 2813 aa11.99□□□□□ -0.49
TVP23B-202ENST00000476139 FN1P02751 2386 aaKnown RBP11.99□□□□□ -0.49
TVP23B-202ENST00000476139 TMEM238LA0A1B0GVL6 79 aa11.99□□□□□ -0.49
TVP23B-202ENST00000476139 A6NJY4 79 aa11.99□□□□□ -0.49
TVP23B-202ENST00000476139 GIG44P09565 113 aaPredicted RBP11.99□□□□□ -0.49
TVP23B-202ENST00000476139 AMELXQ99217 191 aa11.99□□□□□ -0.49
TVP23B-202ENST00000476139 H7C2G1 150 aa11.99□□□□□ -0.49
TVP23B-202ENST00000476139 IGHV3-53P01767 116 aa11.99□□□□□ -0.49
TVP23B-202ENST00000476139 ZNF22P17026 224 aaPredicted RBP11.99□□□□□ -0.49
TVP23B-202ENST00000476139 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.98□□□□□ -0.49
TVP23B-202ENST00000476139 IGKV2-29A2NJV5 120 aaPredicted RBP11.98□□□□□ -0.49
TVP23B-202ENST00000476139 IGHV3-30P01768 117 aa11.98□□□□□ -0.49
TVP23B-202ENST00000476139 IGHV3-30-5P0DP03 117 aa11.98□□□□□ -0.49
TVP23B-202ENST00000476139 PTH2Q96A98 100 aa11.98□□□□□ -0.49
TVP23B-202ENST00000476139 CFC1BP0CG36 223 aa11.98□□□□□ -0.49
TVP23B-202ENST00000476139 CFC1P0CG37 223 aa11.98□□□□□ -0.49
TVP23B-202ENST00000476139 NDUFA11Q86Y39 141 aa11.98□□□□□ -0.49
TVP23B-202ENST00000476139 SLC25A29Q8N8R3 303 aa11.98□□□□□ -0.49
TVP23B-202ENST00000476139 TRAV8-3A0A0A6YYJ7 113 aa11.97□□□□□ -0.49
TVP23B-202ENST00000476139 RS1O15537 224 aa11.97□□□□□ -0.49
TVP23B-202ENST00000476139 RPL35AP18077 110 aaKnown RBP11.97□□□□□ -0.49
TVP23B-202ENST00000476139 Q6ZTI0 123 aa11.97□□□□□ -0.49
TVP23B-202ENST00000476139 NFE4Q86UQ8 179 aa11.97□□□□□ -0.49
TVP23B-202ENST00000476139 CHCHD7Q9BUK0 85 aa11.97□□□□□ -0.49
TVP23B-202ENST00000476139 PRO0461Q9UI25 63 aa11.97□□□□□ -0.49
TVP23B-202ENST00000476139 TMEM223A0PJW6 202 aa11.97□□□□□ -0.49
TVP23B-202ENST00000476139 A8MZ25 164 aa11.97□□□□□ -0.49
TVP23B-202ENST00000476139 IGLV1-51P01701 117 aa11.97□□□□□ -0.49
TVP23B-202ENST00000476139 KRTAP10-3P60369 221 aa11.97□□□□□ -0.49
TVP23B-202ENST00000476139 GTSF1LQ9H1H1 148 aa11.97□□□□□ -0.49
TVP23B-202ENST00000476139 RHODO00212 210 aa11.97□□□□□ -0.49
TVP23B-202ENST00000476139 C19orf73Q9NVV2 129 aa11.96□□□□□ -0.5
TVP23B-202ENST00000476139 LY6G6DO95868 133 aa11.95□□□□□ -0.5
TVP23B-202ENST00000476139 PYGO1Q9Y3Y4 419 aa11.95□□□□□ -0.5
TVP23B-202ENST00000476139 A4D1N5 150 aa11.94□□□□□ -0.5
TVP23B-202ENST00000476139 IL17DQ8TAD2 202 aa11.94□□□□□ -0.5
TVP23B-202ENST00000476139 NOP10Q9NPE3 64 aaKnown RBP11.94□□□□□ -0.5
TVP23B-202ENST00000476139 SMCPP49901 116 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms