RNA–Protein interactions for RNA: ENST00000476074.5

PCDH15-222, Transcript of protocadherin related 15, human

TSL 3

Gene PCDH15, Length 754 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-222	ENST00000476074	MINOS1	Q5TGZ0	78 aa		3.87	□□□□□ -1.79
PCDH15-222	ENST00000476074		Q6ZRP5	223 aa		3.87	□□□□□ -1.79
PCDH15-222	ENST00000476074	LINC00643	Q86TS7	51 aa		3.87	□□□□□ -1.79
PCDH15-222	ENST00000476074	MUSTN1	Q8IVN3	82 aa		3.87	□□□□□ -1.79
PCDH15-222	ENST00000476074	C3orf22	Q8N5N4	141 aa		3.87	□□□□□ -1.79
PCDH15-222	ENST00000476074	C14orf178	Q8N769	122 aa	Predicted RBP	3.87	□□□□□ -1.79
PCDH15-222	ENST00000476074	LINC00526	Q96FQ7	95 aa		3.87	□□□□□ -1.79
PCDH15-222	ENST00000476074	METTL26	Q96S19	204 aa		3.87	□□□□□ -1.79
PCDH15-222	ENST00000476074	PPDPF	Q9H3Y8	114 aa		3.87	□□□□□ -1.79
PCDH15-222	ENST00000476074	DYNLRB1	Q9NP97	96 aa		3.87	□□□□□ -1.79
PCDH15-222	ENST00000476074	PHLDA3	Q9Y5J5	127 aa		3.87	□□□□□ -1.79
PCDH15-222	ENST00000476074	ICOS	Q9Y6W8	199 aa		3.87	□□□□□ -1.79
PCDH15-222	ENST00000476074	MINOS1-NBL1	R4GNA1	71 aa		3.87	□□□□□ -1.79
PCDH15-222	ENST00000476074	MED13	Q9UHV7	2174 aa		3.87	□□□□□ -1.79
PCDH15-222	ENST00000476074	CNTRL	Q7Z7A1	2325 aa		3.86	□□□□□ -1.79
PCDH15-222	ENST00000476074	TRBV7-1	A0A0A6YYK4	115 aa		3.86	□□□□□ -1.79
PCDH15-222	ENST00000476074	IGHV7-81	A0A0B4J1V7	117 aa		3.86	□□□□□ -1.79
PCDH15-222	ENST00000476074		J3KT08	172 aa		3.86	□□□□□ -1.79
PCDH15-222	ENST00000476074		K7EQD1	137 aa		3.86	□□□□□ -1.79
PCDH15-222	ENST00000476074	SOCS3	O14543	225 aa		3.86	□□□□□ -1.79
PCDH15-222	ENST00000476074	TGFA	P01135	160 aa		3.86	□□□□□ -1.79
PCDH15-222	ENST00000476074	IGKV3-20	P01619	116 aa		3.86	□□□□□ -1.79
PCDH15-222	ENST00000476074	MGP	P08493	103 aa		3.86	□□□□□ -1.79
PCDH15-222	ENST00000476074	RNASE3	P12724	160 aa	Known RBP	3.86	□□□□□ -1.79
PCDH15-222	ENST00000476074	S100A4	P26447	101 aa	Known RBP	3.86	□□□□□ -1.79
PCDH15-222	ENST00000476074	MIA	Q16674	131 aa		3.86	□□□□□ -1.79
PCDH15-222	ENST00000476074		Q1RN00	199 aa		3.86	□□□□□ -1.79
PCDH15-222	ENST00000476074	DAND5	Q8N907	189 aa		3.86	□□□□□ -1.79
PCDH15-222	ENST00000476074	EEF1AKMT3	Q96AZ1	226 aa		3.86	□□□□□ -1.79
PCDH15-222	ENST00000476074	EDA2R	Q9HAV5	297 aa		3.86	□□□□□ -1.79
PCDH15-222	ENST00000476074	CSDC2	Q9Y534	153 aa	Known RBP	3.86	□□□□□ -1.79
PCDH15-222	ENST00000476074		S4R3C0	116 aa		3.86	□□□□□ -1.79
PCDH15-222	ENST00000476074	AHCTF1	Q8WYP5	2266 aa		3.86	□□□□□ -1.79
PCDH15-222	ENST00000476074	NCOR2	Q9Y618	2525 aa		3.85	□□□□□ -1.79
PCDH15-222	ENST00000476074	AGRN	O00468	2067 aa		3.85	□□□□□ -1.79
PCDH15-222	ENST00000476074	IGHV3-23	P01764	117 aa		3.85	□□□□□ -1.79
PCDH15-222	ENST00000476074	CRYGA	P11844	174 aa		3.85	□□□□□ -1.79
PCDH15-222	ENST00000476074	HIST1H4A	P62805	103 aa	Known RBP	3.85	□□□□□ -1.79
PCDH15-222	ENST00000476074	ZNF56	Q15929	161 aa		3.85	□□□□□ -1.79
PCDH15-222	ENST00000476074	C15orf32	Q32M92	178 aa		3.85	□□□□□ -1.79
PCDH15-222	ENST00000476074	FAM222A	Q5U5X8	452 aa		3.85	□□□□□ -1.79
PCDH15-222	ENST00000476074	C5orf38	Q86SI9	138 aa		3.85	□□□□□ -1.79
PCDH15-222	ENST00000476074	TMEM61	Q8N0U2	210 aa		3.85	□□□□□ -1.79
PCDH15-222	ENST00000476074		Q8N9W7	124 aa		3.85	□□□□□ -1.79
PCDH15-222	ENST00000476074	KRTAP1-5	Q9BYS1	174 aa		3.85	□□□□□ -1.79
PCDH15-222	ENST00000476074	APC2	O95996	2303 aa		3.85	□□□□□ -1.79
PCDH15-222	ENST00000476074	CACNA1B	Q00975	2339 aa		3.85	□□□□□ -1.79
PCDH15-222	ENST00000476074	ACACB	O00763	2458 aa		3.85	□□□□□ -1.79
PCDH15-222	ENST00000476074	DNAJC13	O75165	2243 aa		3.85	□□□□□ -1.79
PCDH15-222	ENST00000476074	FAM236A	A0A1B0GUQ0	79 aa		3.84	□□□□□ -1.79
PCDH15-222	ENST00000476074	FAM236B	A0A1B0GV22	79 aa		3.84	□□□□□ -1.79
PCDH15-222	ENST00000476074	KLLN	B2CW77	178 aa		3.84	□□□□□ -1.79
PCDH15-222	ENST00000476074		E7EQL1	145 aa		3.84	□□□□□ -1.79
PCDH15-222	ENST00000476074	NPFF	O15130	113 aa		3.84	□□□□□ -1.79
PCDH15-222	ENST00000476074	UBE2E1	P51965	193 aa		3.84	□□□□□ -1.79
PCDH15-222	ENST00000476074	MRPS36	P82909	103 aa	Known RBP	3.84	□□□□□ -1.79
PCDH15-222	ENST00000476074	C9orf153	Q5TBE3	101 aa		3.84	□□□□□ -1.79
PCDH15-222	ENST00000476074	KRTAP5-11	Q6L8G4	156 aa		3.84	□□□□□ -1.79
PCDH15-222	ENST00000476074	C20orf203	Q8NBC4	194 aa		3.84	□□□□□ -1.79
PCDH15-222	ENST00000476074	DCANP1	Q8TF63	244 aa		3.84	□□□□□ -1.79
PCDH15-222	ENST00000476074	CHCHD5	Q9BSY4	110 aa		3.84	□□□□□ -1.79
PCDH15-222	ENST00000476074	ZNF256	Q9Y2P7	627 aa	Predicted RBP	3.84	□□□□□ -1.79
PCDH15-222	ENST00000476074	PTPRQ	Q9UMZ3	2332 aa		3.84	□□□□□ -1.79
PCDH15-222	ENST00000476074	CHD8	Q9HCK8	2581 aa		3.84	□□□□□ -1.8
PCDH15-222	ENST00000476074	AKAP13	Q12802	2813 aa		3.84	□□□□□ -1.8
PCDH15-222	ENST00000476074	IGLV4-3	A0A075B6K6	122 aa		3.83	□□□□□ -1.8
PCDH15-222	ENST00000476074	IGHV1-58	A0A0C4DH39	117 aa		3.83	□□□□□ -1.8
PCDH15-222	ENST00000476074	SMIM9	A6NGZ8	99 aa		3.83	□□□□□ -1.8
PCDH15-222	ENST00000476074	FAM223B	A6NKX1	122 aa		3.83	□□□□□ -1.8
PCDH15-222	ENST00000476074	ATOX1	O00244	68 aa		3.83	□□□□□ -1.8
PCDH15-222	ENST00000476074	TRAC	P01848	142 aa		3.83	□□□□□ -1.8
PCDH15-222	ENST00000476074	IGHV3-30-3	P0DP02	117 aa		3.83	□□□□□ -1.8
PCDH15-222	ENST00000476074	COX7C	P15954	63 aa		3.83	□□□□□ -1.8
PCDH15-222	ENST00000476074	EMP1	P54849	157 aa		3.83	□□□□□ -1.8
PCDH15-222	ENST00000476074	RPL39	P62891	51 aa	Known RBP	3.83	□□□□□ -1.8
PCDH15-222	ENST00000476074	VMO1	Q7Z5L0	202 aa		3.83	□□□□□ -1.8
PCDH15-222	ENST00000476074	FAM223A	Q8IWN6	122 aa		3.83	□□□□□ -1.8
PCDH15-222	ENST00000476074	C9orf85	Q96MD7	179 aa		3.83	□□□□□ -1.8
PCDH15-222	ENST00000476074	TIMM21	Q9BVV7	248 aa		3.83	□□□□□ -1.8
PCDH15-222	ENST00000476074	IGLV7-46	A0A075B6I9	117 aa		3.82	□□□□□ -1.8
PCDH15-222	ENST00000476074	TINCR	A0A1B0GVN0	87 aa		3.82	□□□□□ -1.8
PCDH15-222	ENST00000476074		H7C2G1	150 aa		3.82	□□□□□ -1.8
PCDH15-222	ENST00000476074		I3L3M4	83 aa		3.82	□□□□□ -1.8
PCDH15-222	ENST00000476074		M0QY20	66 aa		3.82	□□□□□ -1.8
PCDH15-222	ENST00000476074	NDUFA4	O00483	81 aa		3.82	□□□□□ -1.8
PCDH15-222	ENST00000476074	COX7A2L	O14548	114 aa		3.82	□□□□□ -1.8
PCDH15-222	ENST00000476074	IGF1	P05019	195 aa		3.82	□□□□□ -1.8
PCDH15-222	ENST00000476074	INAFM2	P0DMQ5	153 aa		3.82	□□□□□ -1.8
PCDH15-222	ENST00000476074	LINC00694	P0DN24	101 aa		3.82	□□□□□ -1.8
PCDH15-222	ENST00000476074	MT3	P25713	68 aa		3.82	□□□□□ -1.8
PCDH15-222	ENST00000476074	ID1	P41134	155 aa		3.82	□□□□□ -1.8
PCDH15-222	ENST00000476074	HERVK_113	P63121	156 aa		3.82	□□□□□ -1.8
PCDH15-222	ENST00000476074	PRB3	Q04118	309 aa	Predicted RBP	3.82	□□□□□ -1.8
PCDH15-222	ENST00000476074	CLEC19A	Q6UXS0	136 aa		3.82	□□□□□ -1.8
PCDH15-222	ENST00000476074	OR13C6P	Q8NH95	151 aa		3.82	□□□□□ -1.8
PCDH15-222	ENST00000476074	COPS9	Q8WXC6	57 aa		3.82	□□□□□ -1.8
PCDH15-222	ENST00000476074	VSIG2	Q96IQ7	327 aa		3.82	□□□□□ -1.8
PCDH15-222	ENST00000476074	PRORY	Q9H606	182 aa		3.82	□□□□□ -1.8
PCDH15-222	ENST00000476074	IGF2R	P11717	2491 aa		3.82	□□□□□ -1.8
PCDH15-222	ENST00000476074	SPEG	Q15772	3267 aa		3.81	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms